Os05g0569700

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Revision as of 10:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0569700| Description = CTP synthase family protein| Version = NM_001062900.1 GI:115465530 GeneID:4339656| Length = 4949 bp| Definition = O...")
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Gene Name

Os05g0569700

Description

CTP synthase family protein

Version

NM_001062900.1 GI:115465530 GeneID:4339656

Length

4949 bp

Definition

Oryza sativa Japonica Group Os05g0569700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28433439..28438387

Sequence Coding Region

28433439..28433560,28433721..28433814,28433912..28433992,28434105..28434153,28434239..28434324
,28434566..28434793,28434875..28434913,28435187..28435249,28435549..28435618
,28435708..28435754,28435831..28435893,28435981..28436031,28436327..28436391
,28436479..28436535,28436685..28436802,28437400..28437486,28437578..28437657
,28438270..28438387

Expression

GEO Profiles:Os05g0569700

Genome Context

<gbrowseImage1> name=NC_008398:28433439..28438387 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28433439..28438387 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagtacgtggtggtgatgggaggcgtgatcagcggcctcggcaagggggtgacggcgagcagcattggcgtcgtcctcaaggcgtgcggcctccgcgttacgtccattaagatcgatccttactttaacgctgatgctggaactatatctcctcatgaacacggcgaagtgtttgtattagatgatggtggtgaggtggacttggatcttggaaactatgagaggtttctcgacattaaactaactcgagaccatagcataaccgccggaaagatccatcatgttatcccacatattacaaatgagatacaagattggattgagcgtatcgcgatggttcccgttgatggtgaggtggatcctgccgatgtctatataatagagctcggtggcactataggcgatattgaatccacgcaatttattgaagcctttagtcaattctcctatcgtgttggtgctggtaatttatgtgtggtgcacgttggtcttgttccagttttgaacgttgtgggtgagcaggaactggagaaaaatgtgaaagaaaaactctctctcttctgccatgtgccggtagctaacatttttactctgtatgatgtttcaaacatctggcgtgttcctctgttattgcgggaccaaaaggcagatcaagctattcttaaagttttgaatcttgaaagcgttgccgaagagcctaacttggaggaatggatggcaagggctgatctatatgacactttacatgaaacagtcaggattgccatggttggaaaatataccggtgtatctgatacatacctttctgtgatgaaggcacctgatgcttacagcacagcatggagtttactgaggggtgcagatggcattttagtacctggtggctttggagaaagaggtgttgaggggaaaatattggctgccaagcacgcacgcgaaaacgatgtccctttcctgggcatatgccttggcatgcagctcgccgtggtagaattcgcatgccatgttttgaaactgcctgatgcgaacagcacagagtttgatgccaaaacggagaacccatgtgtaattataatgccagagtgctccaacgaaggaaagggtggtaccatgcggcgtggatcaaagaggacatttttcaaggttgcaaatagcaagtctgccaagctatatggtagcgtcaaccacatagatgagaggtttcggcacagataccaggtaaatcccaatgtggtgcaattatttgagaacaatgggcttcaggttgtaggcacagacaagaccggagaaattgtgcagatcgtcgaaatacccaatcatcgatttttcgttggcgttcaatttcaccccgagtttatgtcgagaccttcgaaaccttccgcactttttgtcggactaatcgctgcatcgtgtgggcaactggatggtgtgctgcaagatgcggcttgtaaccatgagccacagcagaatcagcgtgcagagaagcgtcctgctgctagtgatctaggagattga</cdnaseq>

Protein Sequence

<aaseq>MKYVVVMGGVISGLGKGVTASSIGVVLKACGLRVTSIKIDPYFN ADAGTISPHEHGEVFVLDDGGEVDLDLGNYERFLDIKLTRDHSITAGKIHHVIPHITN EIQDWIERIAMVPVDGEVDPADVYIIELGGTIGDIESTQFIEAFSQFSYRVGAGNLCV VHVGLVPVLNVVGEQELEKNVKEKLSLFCHVPVANIFTLYDVSNIWRVPLLLRDQKAD QAILKVLNLESVAEEPNLEEWMARADLYDTLHETVRIAMVGKYTGVSDTYLSVMKAPD AYSTAWSLLRGADGILVPGGFGERGVEGKILAAKHARENDVPFLGICLGMQLAVVEFA CHVLKLPDANSTEFDAKTENPCVIIMPECSNEGKGGTMRRGSKRTFFKVANSKSAKLY GSVNHIDERFRHRYQVNPNVVQLFENNGLQVVGTDKTGEIVQIVEIPNHRFFVGVQFH PEFMSRPSKPSALFVGLIAASCGQLDGVLQDAACNHEPQQNQRAEKRPAASDLGD</aaseq>

Gene Sequence

<dnaseqindica>4828..4949#4574..4667#4396..4476#4235..4283#4064..4149#3595..3822#3475..3513#3139..3201#2770..2839#2634..2680#2495..2557#2357..2407#1997..2061#1853..1909#1586..1703#902..988#731..810#1..118#atgaagtacgtggtggtgatgggaggcgtgatcagcggcctcggcaagggggtgacggcgagcagcattggcgtcgtcctcaaggcgtgcggcctccgcgttacgtccattaagatcggtacgtactggagtactcctagcaaccaacgtgctgctaattcctccttttctctttttcctatatatgtttgtgtatgttttagtttactactgtactaacctccatccctaaattaataactgtaattctaacgtataccttttttgtctcaaaatataacagaggtagtatgtttatttgaatcctagaagtgcatgcacttgttaggtcaagtttgacacattatacaacgaattgttacataggattataaaattgattgtagggataaattaaatattccttaaaataaatttaacaaatagcttagagtaagtagactaattaatgcaggtgaagaatcttttcagaaaacgtatttttagagaagtagctgaaaagaacaaggccttaagtccgacctaaagtcacctcttttctttgtagatttaccgattgctgtttccttctgcttatcgatctgttttagaggattttctagaaaaagaacacttcatatcagcgaggcgtattgccttgtagaataatcatgccaacttttatttaatcaggcgtttgatggattgaggtaagacgtacttgttgtaactgtatcgctcaaatgtgcagatccttactttaacgctgatgctggaactatatctcctcatgaacacggcgaagtgtttgtattagatgatggtggtgaggtattggataaattgatgttcacgtcgatgcatccataataggagtcatttttgttcaattgatgtatatattatcttgcacttgttgcaggtggacttggatcttggaaactatgagaggtttctcgacattaaactaactcgagaccatagcataaccgccggaaagatccatcatgtatgtataaacttttgaataatagagtgaacacatcatttcattcactcccaaacattgatttactgcctagaacccacatgcatgtctaagctatggccaataaattgttggccacatttacacttaaaaaataacgccttaggcagagtttgaaaaataaatggatgttatttttttttagaaaatgggtaaaacccaacctctacatccaaacagatgtacatagccaaatgttatgtatgttagattatgatatactcccactatttaactaaacaaaaatcaatattgtaatatgtaagtacttagaataacataatgaaagctatgagctttcgcaaacaaatgaataaataaataaataagtctcattttttaagcaatatgctagctcttgatttgtttacttaaagccatgttcttgtggtggttgacgacagtatgtttacgaaaaagagagaaggggagactacttgggtcagactgttcaggtgccaaccacttctcctcaattcttcttaatttgtttttcaatttttggtaaatttaatatctacatttcttgaaaatccaaccaatcatcatttttttaaggttatcccacatattacaaatgagatacaagattggattgagcgtatcgcgatggttcccgttgatggtgaggtggatcctgccgatgtctatataatagagctcggtggcactataggtaacaagagacaattaaccagctgcattttattcttaacaaattcttagagttacataaatttttggacttacaagtcaatttaaaagctatatatcatgtctttattttcagtttattaacagtatttgttcgacactatgctgcaggcgatattgaatccacgcaatttattgaagcctttagtcaattctcctatcgtgttggtaaataaattgaattattgcataacagatattttaattttctccatggtgatatgataaccttatttgcatgttatttttggacaggtgctggtaatttatgtgtggtgcacgttggtcttgttccagttttgaacgttgtgggtgagcaggtcagaaaaatcatgtctattaattaaccacagctttgctatttgctaattgtcgtcttcgtcttgaaaataatatcctacatcttttggtttatgttcttgtgtagaaaactaagcccactcaaaacagtatacgtaagtagagaatatggtctcacgccaaatattatagcttgccgctgtaccaaggtttgtattatgaacccagtaaccttcatcttgcggttcatttttagttttggaagttgtggtagtcttttatttattaactaagagcgtgtttatttattaataggaactggagaaaaatgtgaaagaaaaactctctctcttctgccatgtgccggtaatgaaattttcttggcttttagttaatgattattttcagcaactaattgctctagttgctaatgaactcttgtggtcatcgcaggtagctaacatttttactctgtatgatgtttcaaacatctggcgtgttcctctgttattgcgggtaaacagctttcttatacaccagacgaaaattttcacccttgcactgtgctgaatatcttcctccatcgttttaggaccaaaaggcagatcaagctattcttaaagttttgaatcttgaaaggtaaaatttccatgtgtcatatatatatgtaagttgaaggtgtcatgctgctatacgcaatcctaaattctcctttatctcatttgcagcgttgccgaagagcctaacttggaggaatggatggcaagggctgatctatatgacactttacatgaaacagtcagcctctttttcatccttttttaaataacggatttttcataaatccggtctttatatttacgaaagatatacacatccaatattttttatcctcgtgatggaaacgaaagggatatttgagattacattaaaaaaggaaaaatatatacgttctattgtttttcttactaacactgatgtgtcatggtgtgagtacatctagatttatctaaatcaaactattgagatcattgttagtaaaagttcagtaagaaaaatttagaaagacctaagcaatctgtgtactcttttttcaggtcaggattgccatggttggaaaatataccggtgtatctgatacatacctttctgtgatgaaggtgggatgcatggatccctatggtgttttcttccttcagtccattacaaacctcatcggttttgtccaacatattttttgatttgcaattcttgtaggctcttctacatgcttgtatagcttgtggcagaaaacttcttgttgattgggttccttccaccgatcttgaggattcaactgccagtgtggtttgaaaaacttacactatgcatcatattttgctctgtagtatatatatttgtctccttacatgttttttgttaaattttaataggcacctgatgcttacagcacagcatggagtttactgagggtgagaagtttactcctgaaatatttgctacatgtagaatttttattatatatgctttatctgaaatatatttcatttcagggtgcagatggcattttagtacctggtggctttggagaaagaggtgttgaggggaaaatattggctgccaagcacgcacgcgaaaacgatgtccctttcctgggcatatgccttggcatgcagctcgccgtggtagaattcgcatgccatgttttgaaactgcctgatgcgaacagcacagagtttgatgccaaaacggagaacccatgtgtaattataatgccagaggtaattaactgtcaaaccctcagtctatatatatagatatgattgtaacatttatatccactcgtgaatataaatatcagatttctatttattgtgtaaaaacgtgtatttgcctttagttttttttttagaaaaatgtgttgcatttaggtgtatgtactggttagctataaacttaatttaggccattagttacttgtttccttaaataagtaacttaatttacttgcatttccttcagtgctccaacgaaggaaagggtggtaccatgcggcgtggatcaaagaggacatttttcaaggttgcaaatagcaagtctgccaagctgtgagtgatcatgaacacttacccttactgtaattgcattgtttctgttttaattttctgtgttaattacgttgcaatcactcagatatggtagcgtcaaccacatagatgagaggtttcggcacagataccaggtttgttgttcaatatctttagtgtagttcatcataatgttactcatggtgttttaattgcttttttaccttttttttaaaaaaagaactgtgatattgactaacttcccaggtaaatcccaatgtggtgcaattatttgagaacaatgggcttcaggttgtaggcacagacaagaccggagaaattgtgcaggtacaagctgaagaacccagcttgcttgaacaaatttcaacttttcacttttccattattcatgcatgctgatgttattgtttgtccaattttctagatcgtcgaaatacccaatcatcgatttttcgttggcgttcaatttcaccccgagtttatgtcgagaccttcgaaaccttccgcactttttgtcggtaagctacttaaacctctgtaaacgacccaagggaagttgatatatatctttcttttgaaaaaaaaaaaagttagcgatgtaatatcaacataccgctttctcgagtaccgtcaaaatttctctttgacaatctgatcaacatgtataccgacctgcaggactaatcgctgcatcgtgtgggcaactggatggtgtgctgcaagatgcggcttgtaaccatgagccacagcagaatcagcgtgcagagaagcgtcctgctgctagtgatctaggagattga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0569700, RefSeq:Os05g0569700