Os05g0571700

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Revision as of 10:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0571700| Description = Cyclin-like F-box domain containing protein| Version = NM_001062910.1 GI:115465550 GeneID:4339668| Length = 4066 bp|...")
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Gene Name

Os05g0571700

Description

Cyclin-like F-box domain containing protein

Version

NM_001062910.1 GI:115465550 GeneID:4339668

Length

4066 bp

Definition

Oryza sativa Japonica Group Os05g0571700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28571316..28575381

Sequence Coding Region

28571563..28571940,28572019..28572159,28572240..28573085,28574120..28574229,28575112..28575190

Expression

GEO Profiles:Os05g0571700

Genome Context

<gbrowseImage1> name=NC_008398:28571316..28575381 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28571316..28575381 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtattttcaagttgaatctgctcctaaagctgcagcggcagcggcagcgccgtcgtcgccaaatccaagcccgtaatggatcagttttgattcatccacgggataaaataaacgctccagcctgtcaaaataacacacactcttggagtggccaagcgaagtgttcagacccaacgcttccggaggacatctcgtgtcatatacattccctgatgtctatgcgggatgctgctcgtgttgcctgtgtgtctcgggcgtttgcacgttcctggagatgccttcccaacctcgacttcagtgaggaatcattaggaataaatagaagtacatgcaaaaaagatgagaaactgggagatttgaccagcaaaattgattggattctgaaaaatcactcaggcattggcataaagaaactcatcattcaggttggcagtgtatacagtcgggacagtagtcatcttgctcatctcgatagttggcttcagtgtgctgttaaaccagggattgaagagctgattgttaatctgtcatcaatgaatgcaaaatacaatttcccatgtgaacttttatctagtggaactggagattcacttcgctatatttatcttgcctcttgcaacttccatcccacagtaagaattggttgcttgaaaagcttgacaagactacagctgtgtatggtgaatatcacggaaaacgagctaaggtgccttctttccatttcattgggtttggagcggttggaactcaggcactgcagtacgttaaaatgcttgaaagtaccatgcctgcagcgtctcagctacctagatgttatgacttgcaccgggctgcaagttatagagagcaaagctccaaatctctccagtattcgctttgaaggtgacctctatgtacaattgtcacttggtgaaccactgcaaattaagcaattgtacaggttatgtaatgatgctgccttttatgctcgtactgagctgccatccagcatgccaaatcttgaaaggcttattatacattctgacactgagatggtcaatacaccaatggtgcctagcaaattctatcacctcaagtacttgagtattgcccttggtggacagacctatgattacctttctctggtttccttttttgatgcttctcctttcttggagacttttatcttgaatgcactccgagaacgcacggaacgtgccacaatttttggggatccttcaggtctgaggatgatgccagagcaccgtcatgacaaactcaagtgtgtgaagataatcaatttctcttctgtgaagactttggttgagttaacatgtcacattgttgaatcagcgacagcactcgaatgtcttacgttggacacaacgtcaggttcgcctagatgttctgtgaacagacttggtaaatgcttcttgatgcgcagagagacactcatggaagcccacagagcactcaaggctgttcaaacatacatcgagctcaaagttccctccaaagttgagttaaacgtcttggagccttgcagccggtgccatgctcttgacctttag</cdnaseq>

Protein Sequence

<aaseq>MGIFKLNLLLKLQRQRQRRRRQIQARNGSVLIHPRDKINAPACQ NNTHSWSGQAKCSDPTLPEDISCHIHSLMSMRDAARVACVSRAFARSWRCLPNLDFSE ESLGINRSTCKKDEKLGDLTSKIDWILKNHSGIGIKKLIIQVGSVYSRDSSHLAHLDS WLQCAVKPGIEELIVNLSSMNAKYNFPCELLSSGTGDSLRYIYLASCNFHPTVRIGCL KSLTRLQLCMVNITENELRCLLSISLGLERLELRHCSTLKCLKVPCLQRLSYLDVMTC TGLQVIESKAPNLSSIRFEGDLYVQLSLGEPLQIKQLYRLCNDAAFYARTELPSSMPN LERLIIHSDTEMVNTPMVPSKFYHLKYLSIALGGQTYDYLSLVSFFDASPFLETFILN ALRERTERATIFGDPSGLRMMPEHRHDKLKCVKIINFSSVKTLVELTCHIVESATALE CLTLDTTSGSPRCSVNRLGKCFLMRRETLMEAHRALKAVQTYIELKVPSKVELNVLEP CSRCHALDL</aaseq>

Gene Sequence

<dnaseqindica>3442..3819#3223..3363#2297..3142#1153..1262#192..270#tttcttcccatcggccttgttggtttgaaatacagagtccaggtgcgagccaagtcccctctcttcgcgactgattgcgtttccttaaatatgcaaggcaggtagagggccgggtgagaaattttgagatttcgacccacagagggcggaaaacccttggattttagattcactcaaggcttcgtcgcgtcatgggtattttcaagttgaatctgctcctaaagctgcagcggcagcggcagcgccgtcgtcgccaaatccaagcccgtagtaagccaaatcaactctatgctatcgtattatttggtatttgtacagcgctcactacaagatccccttcttttgcattaaaaagtaacttctttttccgtcagagatgttctgtggatcgtttccctctggggaaaatcttgtatgtgtgcgcgttgggggatggacggcggcttactgatttttgttttatctaagcagtagtttacttagttttcactcttcgtgtaaatttcacaaaactaccaaattatctcaaacctacagatttgaagtgttatcacaaaactaggggtttaacactaaatttatcacaaaactacatatatatggcaaagtatcgtaaaactacagatttaatattgatgttatcacaaactataggttttagagtttaatcctcagcactactgttatttttgggctataaacgttgctgttttgtgattaaattggaactaaacctgtagttttgtgattcttctttttttttttactaaatagttctgatatatacttagcctcaaatctgtagtttcgtggtacaacaccttcaatctgtaaatttgtgatagtttgatcaaaatatctgcagttttgagcgtatagtatttgtaaccattttttctgtttgtagaaattttgtgttttgttctgcttggttgaacaaattttcataaaattcgggggcaatcctttgcaaaaaatatctatggtcttgcaaaattgctctgttgtgttgtgttctgcttgtttcttgtgcacaacaaacagtggtttgatgagagaaccaaatttgattgtctgcctattattgtgtttgagctttgtattatttggttatgcggtgcattatattcacaaccattcatggtgttgcagatggatcagttttgattcatccacgggataaaataaacgctccagcctgtcaaaataacacacactcttggagtggccaagcgaagtgttcagacccaacgcttccggaggtacgctttagtgaaagtgtgaaaccataaagtctccatgtttgtttttaaatcagttgatttttgtactgctgtcttcctgcttgtgcttcatctactttgactgttctggtgttatttcattatgctgttgtttatatctgctagaaccctcaaggtgcaaactgtggctaaccccttccactgcatactttgtgtgtagtgtgcaaaaactaccacaccctcgtgcaatgtatgccgggcgcctcaataccgtgtagatcaaatgagaagtctagtagtatcttgtgcagctcttgctaccatcctcagtctgcatgtttttatgctgcctcatatgaactccttacagttgaggagacatgctgttaagcatacaacccacatgtgctcttctgcccattgcaccttaaaaacttgccaaatctggagatattttgacatttgctggcatttgtaggcagaccatttaccaaagcacccatatcggctagctcctacagatatgacactgtaaataatctccaatgcatagaaagcatgcattttttaaaacccaagtggatgctttaccctcagtcacctctacatgcaagcacttgccatggcattgttaagacttctatttagcattttattcgcaacaaaacattatttggtgccatagctgccaagacaattggactatatatagtcaaaagttttctgactgtatgtttccaaatgtaatttgtatatactagtttttttggttctgcatttgacttatatttggaatttattcacagcaaaacattgtttggtgcattctggttgacacaaatatgcaataccaacattgtttattactctgtgcctaagtcatacaagcttagatatcacagtgttagctttctatggcattgttttatttatttatttttgaaggcataaaaaacattatgtatattgcttttattgctcaaaatacctgcaacgattacattctgatgcgatgtacagtgttaaactttctccaactcctgtgcatgcaggacatctcgtgtcatatacattccctgatgtctatgcgggatgctgctcgtgttgcctgtgtgtctcgggcgtttgcacgttcctggagatgccttcccaacctcgacttcagtgaggaatcattaggaataaatagaagtacatgcaaaaaagatgagaaactgggagatttgaccagcaaaattgattggattctgaaaaatcactcaggcattggcataaagaaactcatcattcaggttggcagtgtatacagtcgggacagtagtcatcttgctcatctcgatagttggcttcagtgtgctgttaaaccagggattgaagagctgattgttaatctgtcatcaatgaatgcaaaatacaatttcccatgtgaacttttatctagtggaactggagattcacttcgctatatttatcttgcctcttgcaacttccatcccacagtaagaattggttgcttgaaaagcttgacaagactacagctgtgtatggtgaatatcacggaaaacgagctaaggtgccttctttccatttcattgggtttggagcggttggaactcaggcactgcagtacgttaaaatgcttgaaagtaccatgcctgcagcgtctcagctacctagatgttatgacttgcaccgggctgcaagttatagagagcaaagctccaaatctctccagtattcgctttgaaggtgacctctatgtacaattgtcacttggtgaaccactgcaaattaagcaattgtacaggttatgtaatgatgctgccttttatgctcgtactgagctgccatccagcatgccaaatcttgaaaggcttattatacattctgacactgaggtatatatacttttaagattttatttaaaatgagcttatataatcaatagtcttacaatgaaacctgtttgaacctgcagatggtcaatacaccaatggtgcctagcaaattctatcacctcaagtacttgagtattgcccttggtggacagacctatgattacctttctctggtttccttttttgatgcttctcctttcttggagacttttatcttgaatgtaagttccatcctgtaaatatatttatgtaaatatggtggaatcactactcatagtttggttttttcacctttacaggcactccgagaacgcacggaacgtgccacaatttttggggatccttcaggtctgaggatgatgccagagcaccgtcatgacaaactcaagtgtgtgaagataatcaatttctcttctgtgaagactttggttgagttaacatgtcacattgttgaatcagcgacagcactcgaatgtcttacgttggacacaacgtcaggttcgcctagatgttctgtgaacagacttggtaaatgcttcttgatgcgcagagagacactcatggaagcccacagagcactcaaggctgttcaaacatacatcgagctcaaagttccctccaaagttgagttaaacgtcttggagccttgcagccggtgccatgctcttgacctttagatgtcaaatatgtgcgtgtggttgttcttaataaccagtattgcaactgtcagttacaagtgttgttttattaaacgtacatttgccccgaaactatcaggctatcagccctgtttactgttgaggtttgtaatgacatggatgtggtaatgtttcattctgttatttctcttgagacttatgattctttatttgctgtgtttgtaggattgattgttgataatatgttaataatgaggaattactg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0571700, RefSeq:Os05g0571700