Os05g0573500

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Revision as of 10:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0573500| Description = HAP3| Version = NM_001062918.1 GI:115465566 GeneID:4339676| Length = 2697 bp| Definition = Oryza sativa Japonica Gr...")
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Gene Name

Os05g0573500

Description

HAP3

Version

NM_001062918.1 GI:115465566 GeneID:4339676

Length

2697 bp

Definition

Oryza sativa Japonica Group Os05g0573500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28654041..28656737

Sequence Coding Region

28654226..28654428,28654585..28654714,28655594..28655599,28655680..28655757,28656441..28656455

Expression

GEO Profiles:Os05g0573500

Genome Context

<gbrowseImage1> name=NC_008398:28654041..28656737 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28654041..28656737 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggaggggttcgacgggacggagaacggcggcggcggcggcggaggcggagtagggaaggagcaggaccggttcctgccgatcgccaacatcggccgcatcatgcgccgggccgtgccggagaacggcaagatcgccaaggactccaaggagtccgtccaggagtgcgtctccgagttcatcagcttcatcaccagcgaagcaagcgacaagtgcctcaaggagaagcgcaagaccatcaatggggacgacctgatctggtcaatgggcacgctcggattcgaggactatgtcgagcctctcaagctctacctcaggctctaccgggagacggagggtgacacaaagggttcaagagcttctgaactgccagtaaagaaagatgttgtacttaatggagatcctggatcatcgtttgaaggcatgtag</cdnaseq>

Protein Sequence

<aaseq>MSEGFDGTENGGGGGGGGVGKEQDRFLPIANIGRIMRRAVPENG KIAKDSKESVQECVSEFISFITSEASDKCLKEKRKTINGDDLIWSMGTLGFEDYVEPL KLYLRLYRETEGDTKGSRASELPVKKDVVLNGDPGSSFEGM</aaseq>

Gene Sequence

<dnaseqindica>186..388#545..674#1554..1559#1640..1717#2401..2415#gtcgagatccggcggccggtggcgtcctcctccctctccctcctccccaaccaacggcgctgatcccctccgccatctccgtccatctccgcctaaaaaaactaaggtaagccaccaactttcccttgacaccagcagtagtggtagtcgctctccttctcaccgacctctgccatggcccagcgatgtcggaggggttcgacgggacggagaacggcggcggcggcggcggaggcggagtagggaaggagcaggaccggttcctgccgatcgccaacatcggccgcatcatgcgccgggccgtgccggagaacggcaagatcgccaaggactccaaggagtccgtccaggagtgcgtctccgagttcatcagcttcatcaccagcgagtcagtgtcgcctcgcctttgtatttgctgtatatatcggtgccggagcttgcttgatccgatccagttcggagcggcggcggcgcattttgtcgtgcacctgccgtgcagatggcaagggtgactgacggccatctttggcatctttccctgcagagcaagcgacaagtgcctcaaggagaagcgcaagaccatcaatggggacgacctgatctggtcaatgggcacgctcggattcgaggactatgtcgagcctctcaagctctacctcaggctctaccgggaggtattgttcctctcctctctcttccagagtgtttcctagtattgtattgcctagtgatgcatatgttactacgtgggaagtgaaggctggttcacctcgattaggtaggcgtaggcttctatattcgcacacagtttgcctaagcttttgatacacagactgatgctcatacgagctctgcactgattggattgtgcatataccatgaggccatgattcgtgcaaaaggagagagctttcgtgattgtacttatatcaaggctttgacttagtattacttggtctgtcacatgggttgattcactccaaattgatggatggttgatttagttgccaacagtagattgcggaaaggttgaatgtgctgcctgaatgttaagcgcccaatatttctaggtccagggcatgcactgtaaaggtggaattttctttgtacttattggcatgaaccgattcaaaatggccgtagtcttccatctgtaggcgtgctgctggcagagtggccaggttaacatggactgtaattttgttttatgtccataaagctacatatctgatgaacgccaatgcaaacttgcaattgtcagattatgaactacatttatgctgaagacatgtaacatttttgctgaactgacattagtgcctggaccaagattgattttttttcatcagcatatatttttaatttcaatcactagtgagatataaaatacaacaaaaggatgtttcattgtcctccagaaaaagatatttaccgatataatttcctttgttttcttttccatattatacacaaatttttacgtgcactgatagttttttcccctttcttgcatgaataacaacggccgttgattacccttgatggtactgaagacggaggtatttcccatgttgtattacttgttaatctttaagttttgttaatgaaggtttattcaatttacttgttgatcttctagggtgacacaaagggttcaagagcttctgaactgccagtaaagaaagatgttgtacttaatggagatcctggatcatcggtaatatatagttccttgtgccaagttttaataaaacgaaacattgcactaccatctgcctttctttattgtcaagcacacattcacatatttttccctacaacttgctgtattatcttttttgcaagtgctacatcaatatgcacaaaactctcattgttttgaccattcttctattcatgccagtatgccactagctgatgcatcagcagcgtgaaaatgttaactgttttttttagtttctaagattatcgtttgggctgtaaacatattcataacctgttatttctgctgctgcattatgggtctgtgattttgttggagggctgtagtcaggctagcctttgactggttctggtataaaaatggattgaaaagccaaacataaagcctggttttgttttaaggtttcatggaagctggcttactttgtataaacttgttattttcaaaaatcaatcacttctagattgcacattgttgagccatgcattttctttccttttgcttttcaacctttaataccatttctgtatcatgatatatttgttccccttacttttggttttcctgctattcttgatcggtaaccattggtagccatattagtaatattgaaaagttatttttggatgaatataatggtgcaagcaaatctcactggagcattattttcttgacagtttgaaggcatgtaggacgaggagtgtgatagcatctaggaaggagaaccatcgtttttagggaaagaacgctccagcatcctgttatgttgtaagcaggatgcttctaaagttccaataccttgttaccacgaatgttagtcgtcgttctttttgaaatgttcttgtgttagccaggatgtccaaatttgttgtaggttctagttcagtcgtgtgttgtgtggttgtgtctaaccatatttggccgtttccggctgtcctgcatatgctaaattcagaggggtaaagagatctaag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0573500, RefSeq:Os05g0573500