Os05g0581100

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Revision as of 10:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0581100| Description = Conserved hypothetical protein| Version = NM_001187613.1 GI:297724356 GeneID:9271594| Length = 6426 bp| Definition ...")
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Gene Name

Os05g0581100

Description

Conserved hypothetical protein

Version

NM_001187613.1 GI:297724356 GeneID:9271594

Length

6426 bp

Definition

Oryza sativa Japonica Group Os05g0581100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28994215..29000640

Sequence Coding Region

28994215..28994595,28999518..28999558,28999842..29000319,29000422..29000514,29000632..29000640

Expression

GEO Profiles:Os05g0581100

Genome Context

<gbrowseImage1> name=NC_008398:28994215..29000640 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28994215..29000640 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccgcgaggctacctggcggaggtggctctcctcacgtcggcctccgaggacctcgccgccgtgggccccggcgagagggaggggtggctggacgaccccgccgtgctccctcccctcgcgccgcgcgcgcgcgccctcgccgtcgccgttgcggcgcggtccgtgctcgcggttgccccggtcgccggaggaggtggcagggtcacggtgaggcccgcgctggggcccgacgacggccggatctccgccgtggagtggatcccgctcgctggggaggacgccggggaggctggtgagagagtggccgtcgccgtgggcacggacgccaggtggcttctgttatactctctcgccggcgatctgctgcacaagcagacagacaaaggaactttgaatagcatagatggaaacaaagaattacaagagcttttatctggtggatctggagattcactgtggtatatttatcttgcctgttgcaactttcatccaaaagtcagaattggtcacttgaaatgcttgacaagaatacagctgtgtatggtgaatatcacggaaaacgggctaagttctcttctctctatttcactgggtttggagcggttggaactcagacactgcagcacgataaaatccctgaaaataccatgcctgcagcgtctcagctacctagaggttatgacttgcgacgggctgcgagttatagagagcaaagctccaaatctctccagttttcgctttgcgggtgaccttcgtgtacaagtatcacttggtgaaacagtgcaaattaagcaaatctacaggttatgtaacgatgcagccttttatgctcgtactgagctgccatccagcatgccaaatcttgaaaggcttcttatacattctgacactgagatggtcaatacacagatgctgcctagcaaattctatcacctcaagtacttaaatattgctcttggtggaggaacctatgattatctctctcaggcactctga</cdnaseq>

Protein Sequence

<aaseq>MAPRGYLAEVALLTSASEDLAAVGPGEREGWLDDPAVLPPLAPR ARALAVAVAARSVLAVAPVAGGGGRVTVRPALGPDDGRISAVEWIPLAGEDAGEAGER VAVAVGTDARWLLLYSLAGDLLHKQTDKGTLNSIDGNKELQELLSGGSGDSLWYIYLA CCNFHPKVRIGHLKCLTRIQLCMVNITENGLSSLLSISLGLERLELRHCSTIKSLKIP CLQRLSYLEVMTCDGLRVIESKAPNLSSFRFAGDLRVQVSLGETVQIKQIYRLCNDAA FYARTELPSSMPNLERLLIHSDTEMVNTQMLPSKFYHLKYLNIALGGGTYDYLSQAL</aaseq>

Gene Sequence

<dnaseqindica>1..381#5304..5344#5628..6105#6208..6300#6418..6426#atggcgccgcgaggctacctggcggaggtggctctcctcacgtcggcctccgaggacctcgccgccgtgggccccggcgagagggaggggtggctggacgaccccgccgtgctccctcccctcgcgccgcgcgcgcgcgccctcgccgtcgccgttgcggcgcggtccgtgctcgcggttgccccggtcgccggaggaggtggcagggtcacggtgaggcccgcgctggggcccgacgacggccggatctccgccgtggagtggatcccgctcgctggggaggacgccggggaggctggtgagagagtggccgtcgccgtgggcacggacgccaggtggcttctgttatactctctcgccggcgatctgctgcacaagcaggttgctatgtgtgatcgatctcttctctctggatgttttgtcatagaatcatacaatataatgtttataagaggcctgcttaatgaacaccggaattatcaaaaaggtaaccagataaagtcagttccaaatatcgtttgtttgcacatgagaaagtcaatccaaagggcatgaatccatgaacagatgaacataccaatgaacttgtagatctgccacattgggcattcctagcattgtttgccacatccattttaacttgttttgcctaatttttttcattgacaaaagctgcagccatgtaaccaattaattcaggtttagtttcctgttagctttgagatatactgaaaaataacctgaccctaatgcatttaggcccactaatgaatgtatcctaggggcactgatgtgccctatttttcaaattcactgtcaaaataaaaaaaaatgtctttgttctatttttttgttatgttgatggtaaagatatgcttgcatttgtacataagttatttgtttaggaaggtatcactgagaaagtggcatttcaattacaggtatatatcattgtgtttttatgagtttatatatccacacacacttttgtttcttcagattttaataaatgcacaaacaaagtagatgcatggtttttacttattttcctgctcatcatgtactatcttttttacttccatgacaaaacctaactgctactcttcttttcatggctaatttatttgtttcgatgttcttagggaaatgttataggctgaaggaaaaatcttacgcaaatccatattggagttgatgcggctaatttcttgattgaaaaaggatacagtggctcctggaatttgttattttcttcagcaaggtataatgaccaaaagaccaaaagcacaattaccccgaccaggtcccaaagaacccttcttaccacctcagaacatgagtttcctccaaatgcacatttttttatgcaaactatgcacgtttgttgtatttcgtaacagcccgatgacgagctcatgagcgtgttgcataacctgccagacataaacatcacctgcaaggcacggcaggtcaagcttttaagccatcatagagtttggtgctattctgccaactagattcgtgcttggattggaggatggtatggtgctgcagcctccaagagttacacattttggtaatttatctattattttttatccttttggatatgcaaggctttgtatattagctaataagatataactaattgaagtagattgtcaatacattagctcattcatattctagtgacccgatggatttgaggcttgcattctaccggcaaagtaggtggtatgatattgtgattttgtttcatgtcaccgtctgatttatagggaatgacgatgtggccttgcacaactataatcacaatgtgtacacaacctggagcataatgaacatattgtgactatagttcttttctccttcggtatacctctttcactgatttttttcccttttcaaaggtgtttatagagaaacttaatgcttattttgccaaagccgtctattataggaaaggtttgagagtacccagaaagagctatctatctatatatatacagaatagaatgcaccatttccccaaaggaaagactcggcatcctagcgatcataattctcaaccatagagataatgagtatgaccaacaactcttgcaactggcagtttttacagaaatggaaatcttgcaggccatcatcttagcaatagaattccgagacttatatttccctttttacatatgaaagcaaaagaaagagcagtgaaattgattgctaattttaggttgtcactaacttatgtaagtttatttgtgaaattctaactcccagactattttcgaaatttatgtaagttatttctaaaatttgaaatttcattgctaatatcctaaaaatgtgcttactaatatgtgaccaccctgcaggcaacaaagcacaagttcatctataatctgtcatacaagtgttgctatctatttatatactgactacctactttattattcttgtatttgtgaacatacttctatatgtcaggtattgttcccgcgagtcttgtagatgatcaacgtggctctttatgtagtactatgtatatgaaaactaggactctgtaagttcattcctttgcaatattatttcaaggccattagtatcatgcgtagatacaaattttctaattagtgcacatcaagtgtataaaggtcaagaaaggcaaggtcatgggtgtatggtcaaggttggtcactttttcatcttatttttatctcatgaatccaatttttggggcaaaccgatctctgggttgtcaaattagtaacaactgttccattaatcatccatccaatcgatagatttatgccaaacatttctttagctgtattgaagtttggactgggcctgctttagatcaggcttagtttgtgctgggctgcaagcttgtgttgtgttagcctctcagctttgggccagaccatatgagctccttttttctttcttgagtagacactggcttgagatggtgttttgtagcccttatattgacaaattctttttttaacgaaattatattgacggattcttattcctttatactatgtggatagttgctgcacattttttttctccttcaaagttttaacatttaggaaaaaaaattactactatcttctctattaatatatacatggcaaagcttttgctgtcctttaaaaaaaatactccctccgtttcgtaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatatagacatatatatctatctagattcatgaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtactatgtatgctacatcagtatgtacatgactggatgggttgccatgcggatgaagatggcacattcatttgggtaaaatgacttgcatggccatcattagttgtgaggaagacttacattgctcttgccattcatttgggtaaaatggcttgcatggcctatttacaagattatgagccaaatgtggtttgctttgttgcaaatgaaaatatagtagttcgcaggctgcaatgttgcaccataacctgactaacctgcaaaggctttgatatgagcctaattgcttggtaacagattttctagtctaagctgaattgcattgggttactgtaacctgtactgaaacatgaagttaggtaccagctactgctattttccattagtacagacgatttacacttgcccagttaaaatcaaatgttatagcaataaacaaacaaagtgcagagttagcacggatttgtgaaggctagaaatttcttgcatcagtaggcactcacagctgcagtatgtcaacaggtgattttatcattttggctgaaccgagacctggtgcatcctctggtggtgaggtgagcctgtattttggtggcatggatccaaagcactataagagggatcacgcctatgtcccagtttctcgttaaggctactagcagttaaacacgggggatctccttattgatggccactcaactggcttctatgcaaaaggctgcgctgctattgtggactctggaacttccttgcttgctggtcctatagtatgtattattaatatcttcgaattaaaggtccagatcacctctatatttgtttgttcatggttactgagctcaaagtttccattctgtgataatgtagttgattggtcaaggtagatattgcccaataagtcaataactatacaaatatttagatagtcgctagatgctaggtactgagtgcagctgcaattttcagcaatatggtgtatgacttaaaacctttgcaccttctgttctctacaggctattagttgctcaggtgaaccatgctattgaggctgaaggaattatcagcacggaatgatcggtggtgggaacgtgtgtttggggtaggcggtagatgagggagaaataagttctctatactgattaatgcaaaccatggtttagtaagatttcaagaggcttgactacttgatcatgcaaaaaaatgagctttaagtgcaataagtcgatgacattttttttagaaatgcaaatgacacatcgacaataagaatgtgttttcattttagaaatagttatatatagttcatttgccagctttgcaattatgcacctctcgtaaatcttgcctagaagtttaataccattatgacaacctccatgaacctgtaggttctttactgtcctagccatgccgggtgcagtgcttatcaatccaaaggcaatatgatggtctcgagaggcctttgcgcagacagaaaatgcatccaacatttggcagagttcaagatgttgggtgatcaccttataccaatccttgtaatattgtactgattaatatttgtacaaattgagaagtagatcttcctatcgatttttacatgggtccaatctttgtaatagtgatgctggtcggtatgatgttgtttatatactatcaattctacaatatatttgcaatttgttatgtcataggaataaatttgtaactctattgattttgataatgtggcataggttgtcaattctcctgggttctgtgtcggtgcgtgatggtgggttttttactttcctggctattgtcttgcagggtgttagctttgtacttttttcctactctatttaatgaatcatcgtacaaaagaaattgttatgacataggaagaaattttgtagcttcttgaaaaaaaaaacttgaacacttttaattttttaaaaaattatgaacatctatttttcattagttgacaatttaattacaattttagacagacaaaggaactttgaatagcatagatggaaacaaagagtaaattgacgattttctcaaattgttatgttaaattggaacgatttattagaatgtacaattttttttaatgaactctaaagaaattcaactaattcctatacaaattttttttgcatgagtttcaaagaaattcagctactcctatttatagcacaaacaacatagacggactataaagctaagcgcgccaactggcgtgctcatctcaacgattggcttcagcttgctgtcaaaccagggattgaagagctgatcattaatttgtcatcagttaatgcagattacaagagcttttatctggtggatctggagattcactgtggtatatttatcttgcctgttgcaactttcatccaaaagtcagaattggtcacttgaaatgcttgacaagaatacagctgtgtatggtgaatatcacggaaaacgggctaagttctcttctctctatttcactgggtttggagcggttggaactcagacactgcagcacgataaaatccctgaaaataccatgcctgcagcgtctcagctacctagaggttatgacttgcgacgggctgcgagttatagagagcaaagctccaaatctctccagttttcgctttgcgggtgaccttcgtgtacaagtatcacttggtgaaacagtgcaaattaagcaaatctacaggttatgtaacgatgcagccttttatgctcgtactgagctgccatccagcatgccaaatcttgaaaggcttcttatacattctgacactgaggtatacgctcttaataagattttaaaacgaccaactcgtgatgcatacgcttataaccaataattgtcttacagtgaaacctagtagtatttgaatctgcagatggtcaatacacagatgctgcctagcaaattctatcacctcaagtacttaaatattgctcttggtggaggaacctatgattatctctctcaggtttccttctttgatacttctcctttcttggagactttcaacttgaatgtaataaaggtataaagtaaatgtggtggaattgctgctaattaatttgggttttttgttcactgttaggcactctga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0581100, RefSeq:Os05g0581100