Os05g0585600

From RiceWiki
Revision as of 10:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0585600| Description = Conserved hypothetical protein| Version = NM_001062991.2 GI:297604987 GeneID:4339752| Length = 2471 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0585600

Description

Conserved hypothetical protein

Version

NM_001062991.2 GI:297604987 GeneID:4339752

Length

2471 bp

Definition

Oryza sativa Japonica Group Os05g0585600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29228519..29230989

Sequence Coding Region

29228519..29228593,29228683..29228778,29229017..29229192,29230827..29230989

Expression

GEO Profiles:Os05g0585600

Genome Context

<gbrowseImage1> name=NC_008398:29228519..29230989 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:29228519..29230989 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgtaggcgtttcttgtttcaggaattctcgtccgtgctgtccagatcgatgcctaatcgtcctacctccgctgaaggaggaggcgtttctgctatcaacaatgtttttaatggagctctccgtcgttttagcacggtgattcccaataaccatggccttcctgtttctcaagcaaagtgcctgaattctattcaaagccctaacgcagctaccaaagcaaaccacccaacaattggtgtggttccttttgccagccggactttcttctcttatacaaaaccctaccacctgccttctctgggtgaaaccaattacctggattatgcagcagcagactttaaagcgtcggaagatgctttcagaagaggcatgaggaatataaggtttgtcattgctgttaatgccgctatatggtgttccaacatttactatatgatcgtcagcgctgccatggtgataagtccaaagatgaaagtaggaacttccaggaaccatgaggtgggctag</cdnaseq>

Protein Sequence

<aaseq>MCRRFLFQEFSSVLSRSMPNRPTSAEGGGVSAINNVFNGALRRF STVIPNNHGLPVSQAKCLNSIQSPNAATKANHPTIGVVPFASRTFFSYTKPYHLPSLG ETNYLDYAAADFKASEDAFRRGMRNIRFVIAVNAAIWCSNIYYMIVSAAMVISPKMKV GTSRNHEVG</aaseq>

Gene Sequence

<dnaseqindica>1..75#165..260#499..674#2309..2471#atgtgtaggcgtttcttgtttcaggaattctcgtccgtgctgtccagatcgatgcctaatcgtcctacctccgctgtatgtatacacactcctccaaatctttcaaatttctggtttttctttcacagcagggaagagcataattgctcttttcctcctctcaggaaggaggaggcgtttctgctatcaacaatgtttttaatggagctctccgtcgttttagcacggtgattcccaataaccatggccttcctgtttctgtaagtagctaatagtactcaatttctttgctagcactagttttacactttcaaaccggccaatttataattccttttcttttttaaaaaaagaacaaggcggtgccttttcttttgtttcctttctcacatctatgcaattttcgataactttgatttttccacaatataagagtgaacttgtatgcctttgttgaaaaaaaaaatattaatttccttgtactgccttccaatgcagcaagcaaagtgcctgaattctattcaaagccctaacgcagctaccaaagcaaaccacccaacaattggtgtggttccttttgccagccggactttcttctcttatacaaaaccctaccacctgccttctctgggtgaaaccaattacctggattatgcagcagcagactttaaagcgtaagtctgagtactagcctgtatcagtttacttcctgttacttgaattgatgtgtttattgttggcttagcccgaatcttgttctgctatatataaactaaatttcagcttattatttggtcttttctttatttgcgggatgcatttgagagcatatattgtcattgtagttcccgttagatctggttacagggacggctgttaaggagttacaggccagatgatgattgtattttttttgtttgttaatatatgagcaactctaataaaattttagttcattagttggatccttcccatagtacatgattgtaggaaagcaaatactagtaatctaggtcgatcaaattaaacataatcgaatgaaagaacctgtttacaggaaaaaggtaaactttgctcccctgaactttagctatgggaatttttgcaacataggttctgatcccgtctatcatcccataaactttcaacttagaacacagcttgtacgacaggaagcaaaaatgccagttgtttttagggattaaaacaagctatatcacttcttttagtgaaatagtttcgcagtagaaaaatggactgatttttaacttaattatggggcatgagcatccgcatgtatagtttctccttttctggtggacagttgttattcttttttctggagaaatctccagttcaattaaacctatgaaaactcaatttttctatgttcacgaagaaattattaaaggtagggataggcatggtctctttctcaccaaatttctaagaccaaactcaacttcgtttggaagattaaaagaagacaaattctgcatgaaactttcctatcactatccgttcaaagtttgtatttcttgtatcttgcaagcaaatttgaatttggtgttgaaatcttgtggagatatagaccatgcctatacctacctctaatattttactcacaatttttttcatgattgtagagatcttttacgtcctgttttgagaggtttgtatctattattttcacttgatcctcttaggatatgtttggtagggctccaaatttagagctagagttgtggaggtgggaaaaggtatctccacccttcctatgtgtattacggagcagattcattgtagtagtgtttggttcggctccagctctactgaacaaggatctaggagttggagttctgccaaacaaccccttatactagtgtggaatatgaaaaatgacactattttgccttctggatgaattagatagatagtcaaatagtatgttaatgcagctatgtccaaatcgatttgaattatgtagtgagtttctccctccatctactttttatagtcatattttatcttagcacacagacaaacgataagtaattctacctatcatctagttaaacattctactagtcattcctcgtaaacaagcgattaattaatatttacatttctcaatactcatgtagccaattatgtgtagaagaatagagagtcacgcattaaatctgagaaaaccattaagatgataagttgttggattaaaatatgcctatcaaaaataaatttttcagatttaaaaatatgactatcaaaaatagatagagggagtactatgttttatgtggtgcaggtcggaagatgctttcagaagaggcatgaggaatataaggtttgtcattgctgttaatgccgctatatggtgttccaacatttactatatgatcgtcagcgctgccatggtgataagtccaaagatgaaagtaggaacttccaggaaccatgaggtgggctag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0585600, RefSeq:Os05g0585600