Os05g0589400

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Revision as of 10:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0589400| Description = Similar to I-box binding factor (Fragment)| Version = NM_001063016.1 GI:115465762 GeneID:4339780| Length = 1293 bp| ...")
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Gene Name

Os05g0589400

Description

Similar to I-box binding factor (Fragment)

Version

NM_001063016.1 GI:115465762 GeneID:4339780

Length

1293 bp

Definition

Oryza sativa Japonica Group Os05g0589400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29428869..29430161

Sequence Coding Region

29429093..29429347,29429424..29429629,29429719..29430070

Expression

GEO Profiles:Os05g0589400

Genome Context

<gbrowseImage1> name=NC_008398:29428869..29430161 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:29428869..29430161 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcacgccatcatggcgaggcgatgctctggtgactactcgactgcaggccaacgagccggcgaggagggcggcggcggcggcggcgccgggctacggctgttcggggtgcagctccatgctgcggcggccagctcgccggcgtcctacttgcacaagagttacagcatggattgcctgcggctgcaggtttcttctccttcctccttgcagtcgtcgtcgtcgtcgccgtcgccgttgacgtcctcgttgttgctgtccatcgacgagggctgcgagaggccagccgccgacggctacctctccgacgggcctcacggcgcggcggcaaccatgcgggagaggaagaaaggagttccatggagcgagcaagagcacaggctgttcctggcggggctggagaagctgggcaagggcgactggcgaggcatctcccggagcttcgtcaccaccaggacgcccacccaggtcgccagccatgcccagaagttcttcctccgccacaacagcgccgccaagaagaccaacaacaagcgccgctccagcctcttcgacatggttcaggattgtgacagtggaggaagatctctcgcctcatccgatcctgccactcgctgcaacaacaacatctctgcttctctgtctctccaagtttcgcaccacaaatcaggtgacagtgcgtggccttcgtcagaaacaccatcagtttcagaagcacaacaaggtcatggatacggcactagtcaccattgctctccgctggacctggagctgggcatgtccctgtccaccacgccatccatcggaacctag</cdnaseq>

Protein Sequence

<aaseq>MHAIMARRCSGDYSTAGQRAGEEGGGGGGAGLRLFGVQLHAAAA SSPASYLHKSYSMDCLRLQVSSPSSLQSSSSSPSPLTSSLLLSIDEGCERPAADGYLS DGPHGAAATMRERKKGVPWSEQEHRLFLAGLEKLGKGDWRGISRSFVTTRTPTQVASH AQKFFLRHNSAAKKTNNKRRSSLFDMVQDCDSGGRSLASSDPATRCNNNISASLSLQV SHHKSGDSAWPSSETPSVSEAQQGHGYGTSHHCSPLDLELGMSLSTTPSIGT</aaseq>

Gene Sequence

<dnaseqindica>815..1069#533..738#92..443#aatgcaaatgcgcaggtcattctccctcccttaactagcctgctaatctgcagccgcgacacacacaacacacacacaaacgcattgacgcatgcacgccatcatggcgaggcgatgctctggtgactactcgactgcaggccaacgagccggcgaggagggcggcggcggcggcggcgccgggctacggctgttcggggtgcagctccatgctgcggcggccagctcgccggcgtcctacttgcacaagagttacagcatggattgcctgcggctgcaggtttcttctccttcctccttgcagtcgtcgtcgtcgtcgccgtcgccgttgacgtcctcgttgttgctgtccatcgacgagggctgcgagaggccagccgccgacggctacctctccgacgggcctcacggcgcggcggcaaccatgcgggagaggaagaaaggtaaatcaattagttatccattgaagcatgtcaatttgattcttgcaactggaaattgatggatgcaacgtacgacgtggtgcgtgcaggagttccatggagcgagcaagagcacaggctgttcctggcggggctggagaagctgggcaagggcgactggcgaggcatctcccggagcttcgtcaccaccaggacgcccacccaggtcgccagccatgcccagaagttcttcctccgccacaacagcgccgccaagaagaccaacaacaagcgccgctccagcctcttcgacatggtacgctcacacgcatacatactgcattcatatgttcatacaagtcgagctgagctgagctgatatgtcatggcaggttcaggattgtgacagtggaggaagatctctcgcctcatccgatcctgccactcgctgcaacaacaacatctctgcttctctgtctctccaagtttcgcaccacaaatcaggtgacagtgcgtggccttcgtcagaaacaccatcagtttcagaagcacaacaaggtcatggatacggcactagtcaccattgctctccgctggacctggagctgggcatgtccctgtccaccacgccatccatcggaacctagcaccatcagttgccgtggtcatccatcgactggattcccaagatgcttaacaaattttatcctcagggtcaagttccaaccatcttgctgctgaatctaattgacagccatggggacagtgttgtagacaaaagtttggaatcttgtaacattgtctcatgtagccacccattgtatggtcacaagcactgtgcatatctgcaatgctaccatgcttagtattc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0589400, RefSeq:Os05g0589400