Os05g0593900

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Revision as of 10:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0593900| Description = Similar to C13 endopeptidase NP1 precursor| Version = NM_001063039.1 GI:115465808 GeneID:4339804| Length = 1522 bp| ...")
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Gene Name

Os05g0593900

Description

Similar to C13 endopeptidase NP1 precursor

Version

NM_001063039.1 GI:115465808 GeneID:4339804

Length

1522 bp

Definition

Oryza sativa Japonica Group Os05g0593900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29660631..29662152

Sequence Coding Region

29660728..29662152

Expression

GEO Profiles:Os05g0593900

Genome Context

<gbrowseImage1> name=NC_008398:29660631..29662152 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:29660631..29662152 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggcgcggtctcctctgcctgctgctgctgcagctcgtcggcctcgtcgtcgccggcggtgggcggtggcggtggcaggaggagttcctccggctgccgtcgtcggatgagacgacgaggtgggcggtgctgatcgcggggtcgaatgggttctataactaccggcaccaggcggacgtgtgccacgcgtaccagatcatgaggaagggaggcgtggaggagcaaaacatcgtggtgatgatgtacgacgacatcgcccacaaccccgacaaccccaggcctgggctcatcttcaaccacccttccggccccgacgtctacgccggcgtccccaaggattacaccggcgacgacgtcaacgtcaacaacttcctcgccgtcctcctcggcaaccgctccgccctcaccggctccggcagcggcaaggtcgtcgccagcggccccaacgaccacgtcttcgtctactacgccgaccacggcggccccggcgtcctgagcatgccagccgacggcgagtacctgtacgccgacgacctggtcaaggcgctcaagaagaagcacgccggcggcgggtacaagagcctggtcgtgtacgtggaggcgtgcgagtccggcagcatcttcgagggcctcctgccttccgacatctccgtgtacgccaccacggcctccaacgcggaggagagcagctggggcacctactgccccggcgacgaccacgacgccccggcggcggagttcgacacctgcctcggggacctctacagcgtggcgtggatggaggacgcggaggcgcaccaggaggggcgcctcgccgagacgctgcggcagcagtacaggacggtgaagaaccggacgtccgacgagggcacctacacgctcggctcccacgtcatgcagtacggcgacatggcgctcgcaccgcagagcctggacctctactacatggatacatcacctgcgacggcgaacgaccacaaattagctgctgctggcgccaaaggcagccactcctacactgtgtctgtgaatcagcgcgacgccgatctgctctacttgtggcgcaagtaccggagagccggcgaggggacggcagagaaggtggaggctcgggagcggcttgtgcaggagatgggacggcgatcgcgcgtggacagaagcgtggagatgatcgggggcctcctcttgggcggcgccaagcacaagcagcaggttgtgcgggagcgggctgcgctggttgaggactgggagtgcctcaggtcgatggtgcggacgttcgaggatcagtgtgggtcgctgggacagtacgggataaagcacatgcgctccttcgccaacatctgcaacgccggcgtcccccaccacgccatggccaaggccgcctccctggcctgtccatcccctcctccgttacacttatga</cdnaseq>

Protein Sequence

<aaseq>MGRGLLCLLLLQLVGLVVAGGGRWRWQEEFLRLPSSDETTRWAV LIAGSNGFYNYRHQADVCHAYQIMRKGGVEEQNIVVMMYDDIAHNPDNPRPGLIFNHP SGPDVYAGVPKDYTGDDVNVNNFLAVLLGNRSALTGSGSGKVVASGPNDHVFVYYADH GGPGVLSMPADGEYLYADDLVKALKKKHAGGGYKSLVVYVEACESGSIFEGLLPSDIS VYATTASNAEESSWGTYCPGDDHDAPAAEFDTCLGDLYSVAWMEDAEAHQEGRLAETL RQQYRTVKNRTSDEGTYTLGSHVMQYGDMALAPQSLDLYYMDTSPATANDHKLAAAGA KGSHSYTVSVNQRDADLLYLWRKYRRAGEGTAEKVEARERLVQEMGRRSRVDRSVEMI GGLLLGGAKHKQQVVRERAALVEDWECLRSMVRTFEDQCGSLGQYGIKHMRSFANICN AGVPHHAMAKAASLACPSPPPLHL</aaseq>

Gene Sequence

<dnaseqindica>1..1425#atggggcgcggtctcctctgcctgctgctgctgcagctcgtcggcctcgtcgtcgccggcggtgggcggtggcggtggcaggaggagttcctccggctgccgtcgtcggatgagacgacgaggtgggcggtgctgatcgcggggtcgaatgggttctataactaccggcaccaggcggacgtgtgccacgcgtaccagatcatgaggaagggaggcgtggaggagcaaaacatcgtggtgatgatgtacgacgacatcgcccacaaccccgacaaccccaggcctgggctcatcttcaaccacccttccggccccgacgtctacgccggcgtccccaaggattacaccggcgacgacgtcaacgtcaacaacttcctcgccgtcctcctcggcaaccgctccgccctcaccggctccggcagcggcaaggtcgtcgccagcggccccaacgaccacgtcttcgtctactacgccgaccacggcggccccggcgtcctgagcatgccagccgacggcgagtacctgtacgccgacgacctggtcaaggcgctcaagaagaagcacgccggcggcgggtacaagagcctggtcgtgtacgtggaggcgtgcgagtccggcagcatcttcgagggcctcctgccttccgacatctccgtgtacgccaccacggcctccaacgcggaggagagcagctggggcacctactgccccggcgacgaccacgacgccccggcggcggagttcgacacctgcctcggggacctctacagcgtggcgtggatggaggacgcggaggcgcaccaggaggggcgcctcgccgagacgctgcggcagcagtacaggacggtgaagaaccggacgtccgacgagggcacctacacgctcggctcccacgtcatgcagtacggcgacatggcgctcgcaccgcagagcctggacctctactacatggatacatcacctgcgacggcgaacgaccacaaattagctgctgctggcgccaaaggcagccactcctacactgtgtctgtgaatcagcgcgacgccgatctgctctacttgtggcgcaagtaccggagagccggcgaggggacggcagagaaggtggaggctcgggagcggcttgtgcaggagatgggacggcgatcgcgcgtggacagaagcgtggagatgatcgggggcctcctcttgggcggcgccaagcacaagcagcaggttgtgcgggagcgggctgcgctggttgaggactgggagtgcctcaggtcgatggtgcggacgttcgaggatcagtgtgggtcgctgggacagtacgggataaagcacatgcgctccttcgccaacatctgcaacgccggcgtcccccaccacgccatggccaaggccgcctccctggcctgtccatcccctcctccgttacacttatgatctctaattgatctccatcactagctgcagcctgcaataacaatgatcgatgtaatgtgcatcaccaaatcaaatatatgtcatcatactactgcct</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0593900, RefSeq:Os05g0593900