Os06g0104900

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Revision as of 08:59, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0104900| Description = Similar to L-lactate dehydrogenase B (EC 1.1.1.27) (LDH-B) (Fragment)| Version = NM_001063087.1 GI:115465905 GeneID:4...")
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Gene Name

Os06g0104900

Description

Similar to L-lactate dehydrogenase B (EC 1.1.1.27) (LDH-B) (Fragment)

Version

NM_001063087.1 GI:115465905 GeneID:4339856

Length

1508 bp

Definition

Oryza sativa Japonica Group Os06g0104900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:346009..347516

Sequence Coding Region

346273..347355

Expression

GEO Profiles:Os06g0104900

Genome Context

<gbrowseImage1> name=NC_008399:346009..347516 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:346009..347516 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagaaggcgtcgtcgctgtctgagctggggttcgacgccgatggcccgtcattcttccggcacctgacgctgaccgatggcgacgacggcacgctgccccggcggcggctgatcaagatctcggtgatcggcgcgggcaacgtgggcatggccatcgcgcagacgatcctgacgcaggacctcgccgacgagatcgtgctgatcgacgcggtggcggacaaggtgcggggcgagatgctggacctgcagcacgcggcggcgttcctcccccgcgtgaacatcgtgtccggcacggaggtgtcgctgacgaggagctcggacctggtgatcgtgacggcgggggctcggcagatcccgggggagacgcggctgaacctgctgcagcggaacgtgtcgctgttccggaagatcgtgccggcggcggcggaggcgtcgccggagtcggtgctggtgatcgtgtcgaacccggtggacgtgctgacgtacgtggcgtggaagctgtcggggttcccggcgagcagggtgatcgggtcggggacgaacctggactcgtctcggttcaggttcctcctcgccgagcacctggaggtgagcgcgcaggacgtgcaggcgtacatggtgggggagcacggggacagctcggtggcgctgtggtcgagcatcagcgtgggggggatgccggtgctggcgcacctgcagaagaaccaccggtcggcggcgacggcgaagaagttcgacgaggcggcgctggaggggatccggcgggcggtggtggggagcgcgtacgaggtgatcaagctcaaggggtacacgtcgtgggccatcggctactccgtcgccagcatcgcctggtcgctgctccgtgaccagcgccgcatccacccggtctccgtcctcgccaagggccttgtccgtggcgtccccgccgaccgcgagctcttcctcagcctgcccgctcgcctcggccgcgccggcgtgcttggcgtcgccgccgagctggtgctcaccgacgaggaggagaggaggcttcgcatctccgccgaaaccctctggggatactgccacgccctcggcctctaa</cdnaseq>

Protein Sequence

<aaseq>MKKASSLSELGFDADGPSFFRHLTLTDGDDGTLPRRRLIKISVI GAGNVGMAIAQTILTQDLADEIVLIDAVADKVRGEMLDLQHAAAFLPRVNIVSGTEVS LTRSSDLVIVTAGARQIPGETRLNLLQRNVSLFRKIVPAAAEASPESVLVIVSNPVDV LTYVAWKLSGFPASRVIGSGTNLDSSRFRFLLAEHLEVSAQDVQAYMVGEHGDSSVAL WSSISVGGMPVLAHLQKNHRSAATAKKFDEAALEGIRRAVVGSAYEVIKLKGYTSWAI GYSVASIAWSLLRDQRRIHPVSVLAKGLVRGVPADRELFLSLPARLGRAGVLGVAAEL VLTDEEERRLRISAETLWGYCHALGL</aaseq>

Gene Sequence

<dnaseqindica>162..1244#gtatagcaaaaacacatttccaacattcggtcttcactactagctagtagtgtttttttcctacatatataaacaataattattcattgacaggcatcaagctagctagctagccaactgtctgcaagaagaagaagaagaagaaggtgcaggataaatcgatgaagaaggcgtcgtcgctgtctgagctggggttcgacgccgatggcccgtcattcttccggcacctgacgctgaccgatggcgacgacggcacgctgccccggcggcggctgatcaagatctcggtgatcggcgcgggcaacgtgggcatggccatcgcgcagacgatcctgacgcaggacctcgccgacgagatcgtgctgatcgacgcggtggcggacaaggtgcggggcgagatgctggacctgcagcacgcggcggcgttcctcccccgcgtgaacatcgtgtccggcacggaggtgtcgctgacgaggagctcggacctggtgatcgtgacggcgggggctcggcagatcccgggggagacgcggctgaacctgctgcagcggaacgtgtcgctgttccggaagatcgtgccggcggcggcggaggcgtcgccggagtcggtgctggtgatcgtgtcgaacccggtggacgtgctgacgtacgtggcgtggaagctgtcggggttcccggcgagcagggtgatcgggtcggggacgaacctggactcgtctcggttcaggttcctcctcgccgagcacctggaggtgagcgcgcaggacgtgcaggcgtacatggtgggggagcacggggacagctcggtggcgctgtggtcgagcatcagcgtgggggggatgccggtgctggcgcacctgcagaagaaccaccggtcggcggcgacggcgaagaagttcgacgaggcggcgctggaggggatccggcgggcggtggtggggagcgcgtacgaggtgatcaagctcaaggggtacacgtcgtgggccatcggctactccgtcgccagcatcgcctggtcgctgctccgtgaccagcgccgcatccacccggtctccgtcctcgccaagggccttgtccgtggcgtccccgccgaccgcgagctcttcctcagcctgcccgctcgcctcggccgcgccggcgtgcttggcgtcgccgccgagctggtgctcaccgacgaggaggagaggaggcttcgcatctccgccgaaaccctctggggatactgccacgccctcggcctctaaattcattaattactacgccaacccgtttatatatgcccatatatatatgattaataatcgtcgtgctaatgcctatcgatcgatattatgcatcatcgtatatgtcggtcgatcgaagcttaatttcatggccgcccgggttgtaataagctactattctcattgtgtgattaattagctctatttctctgattgagctaattatgtgtaactgtatacacattgtgttcaaacaataatggaatgaataaaattgattgagac</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0104900, RefSeq:Os06g0104900