Os06g0105600

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Revision as of 08:59, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0105600| Description = Conserved hypothetical protein| Version = NM_001063092.1 GI:115465915 GeneID:4339861| Length = 3448 bp| Definition ...")
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Gene Name

Os06g0105600

Description

Conserved hypothetical protein

Version

NM_001063092.1 GI:115465915 GeneID:4339861

Length

3448 bp

Definition

Oryza sativa Japonica Group Os06g0105600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:386238..389685

Sequence Coding Region

386576..387098,387173..387468,387570..387674,387744..388067,388165..388276
,388355..388482,388914..389048,389122..389232

Expression

GEO Profiles:Os06g0105600

Genome Context

<gbrowseImage1> name=NC_008399:386238..389685 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:386238..389685 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctggatgattggcaagagaatttggctattataactgcaaacaggacgaaaggtgatgatcttgtaattacgcaccttggagattgcctctggaaagagaaaaatgaggtggcagctgctcattcatgctatttagctgcggaactaaatatcgagtcgtattcagaaagttcaagaatgtgtctaattggtgcagaccatttgagatgtcctcgtacatttaccagccctgaagctatccagcgaacagaggtgtatgaatatgcaaaagttcttggtaattctcagtacatcctcttgccatttcaaccatataagctgatatatgcatacatgcttgtggaggttgggaaggtttctgattcattaaggtattgtcaagcatgcttgaaggtgctgaaagcatctggccgtgcacctgaattagaggcatggaagcagttgttttcatccctagaggagcggatacgcacctaccagcagggtggttatggtacaaatctagcccctgcaaagcttgttggaaaacttttcacatcacttgataaatctttgtcccgcatgatgggtacacaaccttcagcgttgtcaccagtgccacagggctccttaaccgaaagagattcctattcggctcctgcagctacaaattttgtgaataatcagccagtgatggctatgtcttctttgatgtcttctgtttcagagcaatctatgagtgaaatgtcaggaaatactggccctgacagaaaagtcacacataacagaagtgtctctgaaccagactttggcagaacccccaaccagggtgcaggattagataatgcacaaagcacatcaggttcaggtagttcacgttttggatggttgctgcagaagacaatgggacttgtttcaagatctcatcatcaggcgaagctgggggaacaaaacaagttctactatgacgagaagctgaagcggtgggtggaagaaggtgctgacatacctgctgaggagcctccccttcccccacctccaacaaaggccttgttccagaacggtattccagatcagagttcgaatggcccaggcagtgtaagttatactgctaatggattttcagaagcaaggcctttgaatccttctgggcctagttcagggatgccaccaatgccacctagccagaaccaattctcagcacgtggacggatgggtgttagatcaagatacgtcgacacatttaacaagggtggtgcaagtgccactggaccgtcatataataaaccagccaccccatccatgaatccactgtctggtgccactttctttgtgccaactccagctactgttgcgtcagagcagatccctgacccaacagtcaatgttcatcaggatcaaccatcttccacgatagctctgcgggaatcctcggcttcgccaccaccatcagtacaatcaataccagttcaatcaaatattcagcggtatccaagtatggacaacatcatgaccccatctggcagtgggaatggcagctcattctcaaggtcacgagcagcatcatggagtggagcatattcagagcagttgagcggcaatgctgtttcgagatcaccagatggacaacggaccatgatgcagtctccgttgattcctggacagaaacaatcccacagccgttccagtagtaactcatcacttcaattcaacaatggcctgggcgaggatcttcacgaggtagagctctga</cdnaseq>

Protein Sequence

<aaseq>MLDDWQENLAIITANRTKGDDLVITHLGDCLWKEKNEVAAAHSC YLAAELNIESYSESSRMCLIGADHLRCPRTFTSPEAIQRTEVYEYAKVLGNSQYILLP FQPYKLIYAYMLVEVGKVSDSLRYCQACLKVLKASGRAPELEAWKQLFSSLEERIRTY QQGGYGTNLAPAKLVGKLFTSLDKSLSRMMGTQPSALSPVPQGSLTERDSYSAPAATN FVNNQPVMAMSSLMSSVSEQSMSEMSGNTGPDRKVTHNRSVSEPDFGRTPNQGAGLDN AQSTSGSGSSRFGWLLQKTMGLVSRSHHQAKLGEQNKFYYDEKLKRWVEEGADIPAEE PPLPPPPTKALFQNGIPDQSSNGPGSVSYTANGFSEARPLNPSGPSSGMPPMPPSQNQ FSARGRMGVRSRYVDTFNKGGASATGPSYNKPATPSMNPLSGATFFVPTPATVASEQI PDPTVNVHQDQPSSTIALRESSASPPPSVQSIPVQSNIQRYPSMDNIMTPSGSGNGSS FSRSRAASWSGAYSEQLSGNAVSRSPDGQRTMMQSPLIPGQKQSHSRSSSNSSLQFNN GLGEDLHEVEL</aaseq>

Gene Sequence

<dnaseqindica>2588..3110#2218..2513#2012..2116#1619..1942#1410..1521#1204..1331#638..772#454..564#ttcaatgctgagaaccctgttgatggcaattatggtaatttgcatataccccaacggccggtggaggtaatacataacttcattaccacattcttgattgctcatgacagtagaaggatctattgatcaaacatttagacggaatccctaaatttattactcctacctgaatgattattcgattcgaagcaataggggacatgttgtctatttcttttgttataggatccaaatgcttctatttagactctataataattctatgttgtttatgacctatagttctatactcatttcgtgtttatatgtcatgtgatgtatatcatttgattgttcttgacttcccattccatgattttcatacattttagttctcatcttttatcgtgtgtggatcattagggttgaacctaacttagcatttttgttggataggctgtgaattctaagagcatgctggatgattggcaagagaatttggctattataactgcaaacaggacgaaaggtgatgatcttgtaattacgcaccttggagattgcctctggaaagagaaaaatgaggtttgaatctggctagttgagtatatgatttattgacatggttttgtcaaataccttacatatttttatgcaggtggcagctgctcattcatgctatttagctgcggaactaaatatcgagtcgtattcagaaagttcaagaatgtgtctaattggtgcagaccatttgagatgtcctcgtacatttaccagccctgaagctatccaggtcttttatacctgtgccatctattcgatgtttgtgctttctgtgatgataatctttagctacatgttgcattggacatacatcagtcagatgaatggtaggatattattatgggacacgcattatgctataagctccaacaatatctcagatatgaatcattatgtatctaatgtagatggtttcgcatttttgcagaggagcatgcgtatcacatatgtttttagatgtgtcaaattctagtgttattttttgcatgacttactttagtcaaaagctttacagtccctctatttggaccacttcttactcagaaaatggcatgattagatgatgattgtcctcggccttaattcatattattactgtttttttttttgcttttgtcatttgctgtttctaaacaaatgtcctcacaatgtaacaaacagcgaacagaggtgtatgaatatgcaaaagttcttggtaattctcagtacatcctcttgccatttcaaccatataagctgatatatgcatacatgcttgtggaggttgggaaggtttctgattcattaaggtaatttgctgagttactattccagtttttcccctggtttcttagttacacacattgactttaaactactctctttaggtattgtcaagcatgcttgaaggtgctgaaagcatctggccgtgcacctgaattagaggcatggaagcagttgttttcatccctagaggagcggatacgcacctaccagcaggtttgaatttattgtagctgttgcttgctgattctcgtatttactagagcagactgtttcttccatgttgactgatgatcaactcattgttattcagggtggttatggtacaaatctagcccctgcaaagcttgttggaaaacttttcacatcacttgataaatctttgtcccgcatgatgggtacacaaccttcagcgttgtcaccagtgccacagggctccttaaccgaaagagattcctattcggctcctgcagctacaaattttgtgaataatcagccagtgatggctatgtcttctttgatgtcttctgtttcagagcaatctatgagtgaaatgtcaggaaatactggccctgacagaaaagtcacacataacagaagtgtctctgaaccagactttggcagaacccccaaccaggtgcttcttagactggaatgttttcttgatgtgtttcatttctcttttctgaaattggaactctcacagggtgcaggattagataatgcacaaagcacatcaggttcaggtagttcacgttttggatggttgctgcagaagacaatgggacttgtttcaagatctcatcatcaggtgcttgctaaaacattaaattcatccgatcccggtttcgaactgcatgtcacagtagtttttgatttgtgtaacacaactaattcttttgtgccctaaaggcgaagctgggggaacaaaacaagttctactatgacgagaagctgaagcggtgggtggaagaaggtgctgacatacctgctgaggagcctccccttcccccacctccaacaaaggccttgttccagaacggtattccagatcagagttcgaatggcccaggcagtgtaagttatactgctaatggattttcagaagcaaggcctttgaatccttctgggcctagttcagggatgccaccaatgccacctagccagaaccaattctcagcacgtggacggatgggtgttagatcaaggtaatttgtttagttattgccgctgtttgctttatataccaagtggcttatatcatttccttgcccccatgtagatacgtcgacacatttaacaagggtggtgcaagtgccactggaccgtcatataataaaccagccaccccatccatgaatccactgtctggtgccactttctttgtgccaactccagctactgttgcgtcagagcagatccctgacccaacagtcaatgttcatcaggatcaaccatcttccacgatagctctgcgggaatcctcggcttcgccaccaccatcagtacaatcaataccagttcaatcaaatattcagcggtatccaagtatggacaacatcatgaccccatctggcagtgggaatggcagctcattctcaaggtcacgagcagcatcatggagtggagcatattcagagcagttgagcggcaatgctgtttcgagatcaccagatggacaacggaccatgatgcagtctccgttgattcctggacagaaacaatcccacagccgttccagtagtaactcatcacttcaattcaacaatggcctgggcgaggatcttcacgaggtagagctctgatacctgaacaaaagggtaaaagatgaggtgcgtccatcgtgtaaatcaatcatatggccatgttttgtttttcatgtcattttgtatttaatatctatgatgtctagagaggaaacaaaggagcggcgtcccttttcttttcttttctttttttacatgaaagaagtatgcggatgccgttgtacagatagatcactgccagttgatttgagatgccaaaggaaagaaatgacttggtgtaaagtgattactttgctactttcttttacccctttagagcatttgttcatttatttgaaaacaaggatggtctgaaataacaatgccgtgtggctgat</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0105600, RefSeq:Os06g0105600