Os06g0107100

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Revision as of 08:59, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0107100| Description = Protein of unknown function DUF819 family protein| Version = NM_001063102.1 GI:115465935 GeneID:4339871| Length = 23...")
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Gene Name

Os06g0107100

Description

Protein of unknown function DUF819 family protein

Version

NM_001063102.1 GI:115465935 GeneID:4339871

Length

2355 bp

Definition

Oryza sativa Japonica Group Os06g0107100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:453844..456198

Sequence Coding Region

453923..454179,454265..454308,454447..454494,454952..455062,455200..455352
,455440..456014

Expression

GEO Profiles:Os06g0107100

Genome Context

<gbrowseImage1> name=NC_008399:453844..456198 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:453844..456198 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccaccggcaccggccgctctcctcctcccctccaaccattcctatcgcccgctcctgcctcgcccaatcctgcaccacgccaccggcttcgcctgcgcctcggcctcgccctcgccgccccctcgccttcgccttcgccttcggcatgccgccccgctccgtgccgccgccctgccggccatcgccatcgcccccggcgaccactggggcaactgggccttcctcctctccgccgccgccttcggcacctggtcggaggagtccacgtcgtggggcgccgcgctcagcggctcgctcgtcagcaccaccggcgacctcctcaaggccttcctcatcggatcagttgcaactacaattggcacaacgatagcctttctgttggttcctatgaaatcactgggtcaagatagctggaagatcgccgctgcgctcatgggcagctacattggtggagcggtgaattacgtcgcaatctctgaagcacttggcgtttctccgtcagtgctagcagccggtgtggctgcagacaacatcatctctgcactctacttcatgaccctcttctcgctggcagccaagataccagctgaacctaaaactgctcaagagggtagtaacggcggcgagtctgagggcggaaggcggatgtcggtgctccatggcggcgcggcggtggcgctgtcgttcgtgatctgcaaggccgggtcggccatctccagccagctgggaatccagggcggcaccctgccgtgcgtgacggcgctggtggtggcgctggcgacggcgttcccgcggctgctggggaagctggcgccgtccggcgagaccatcgcgctgatcctgatgcaggtgttcttcacggtggtgggcgccaacggcaacctggtggacgcggtgaccaaggcgcccagcgtgttcgcgttcgcgctggtgcaagtgaccatccacctaggcatcgtgctcgccgcagggaagctgatggggttcgagcggaagccgctgctgatcgcgtccaacgccaacgtgggcgggccgacgacggcggcggccatggcgacggccaaggggtggagctcgctgatcgtgccgggcatcctggtgggcatgttcgggatctccattgccacgtttgttggcatcgggttcggcatgtttgtgctcaggaggatctgcggcgcctaa</cdnaseq>

Protein Sequence

<aaseq>MAPPAPAALLLPSNHSYRPLLPRPILHHATGFACASASPSPPPR LRLRLRHAAPLRAAALPAIAIAPGDHWGNWAFLLSAAAFGTWSEESTSWGAALSGSLV STTGDLLKAFLIGSVATTIGTTIAFLLVPMKSLGQDSWKIAAALMGSYIGGAVNYVAI SEALGVSPSVLAAGVAADNIISALYFMTLFSLAAKIPAEPKTAQEGSNGGESEGGRRM SVLHGGAAVALSFVICKAGSAISSQLGIQGGTLPCVTALVVALATAFPRLLGKLAPSG ETIALILMQVFFTVVGANGNLVDAVTKAPSVFAFALVQVTIHLGIVLAAGKLMGFERK PLLIASNANVGGPTTAAAMATAKGWSSLIVPGILVGMFGISIATFVGIGFGMFVLRRI CGA</aaseq>

Gene Sequence

<dnaseqindica>80..336#422..465#604..651#1109..1219#1357..1509#1597..2171#acacttggcgcagacaaaacaacgagaccgtacaggtagaggtggtaaaggtaaacgacgagagctaaagaaatctggcatggcgccaccggcaccggccgctctcctcctcccctccaaccattcctatcgcccgctcctgcctcgcccaatcctgcaccacgccaccggcttcgcctgcgcctcggcctcgccctcgccgccccctcgccttcgccttcgccttcggcatgccgccccgctccgtgccgccgccctgccggccatcgccatcgcccccggcgaccactggggcaactgggccttcctcctctccgccgccgccttcggcacctggtaccgaatgccgctcccttcttctcatgctcgtctcgtctgctctgctctgcctgctcattgctgaataatgatggcatggcaggtcggaggagtccacgtcgtggggcgccgcgctcagcggctcgctcgtcagcatcatggccggcctggccgccacggccacgggtctcgtcacggccggcgcgccggcgcaagacgccgtcatggactacctgctgccggccaccgtcccgctcctgcttctcggcgccgacctccgccgcgtcgtcagcaccaccggcgacctcctcaaggccttcctcatcggatcaggtaacttaattatcttccttattatgtgtatattaatcaattctagtacctccacaattaattaattaactaatgtctctctcttgaatcagcgaaccaataacattgcaaaactttgctactttaattgattaattccccctcttgccgtccggcctgccggccagcccagctaattaattttcgtttaaaagcaaacaaatcgcaagctcccaagatgcaaactcactcggtcatactgacattatagtgcatgtgtcattgcctttgtaactggtaggagtacttactttgattaatttttaactacaaaatgccacaatgatttcatctttccaagtcacccagtcactcaaacactgggacagtgatgttgagcaggaattaactgactgacaagattgatgtgatgcggctgaatgtgctttattattgatgatgcaattaacctttgcagttgcaactacaattggcacaacgatagcctttctgttggttcctatgaaatcactgggtcaagatagctggaagatcgccgctgcgctcatgggcagctacattggtggaggtaaatcatcgttaccagctaaatggggggtatattttggcaggatttaagaaagaattacacatactacattttgattaattaggacattaattatgatctgagcacgcatttccatttccatatgattgaaacagcggtgaattacgtcgcaatctctgaagcacttggcgtttctccgtcagtgctagcagccggtgtggctgcagacaacatcatctctgcactctacttcatgaccctcttctcgctggcagccaagataccagctgaacctaaaactgctcaaggtacgtacggagattcaatatgtatatatcatctgaatttcttagcttataaagctaattaatgaaatgatggatggagcatagcagagggtagtaacggcggcgagtctgagggcggaaggcggatgtcggtgctccatggcggcgcggcggtggcgctgtcgttcgtgatctgcaaggccgggtcggccatctccagccagctgggaatccagggcggcaccctgccgtgcgtgacggcgctggtggtggcgctggcgacggcgttcccgcggctgctggggaagctggcgccgtccggcgagaccatcgcgctgatcctgatgcaggtgttcttcacggtggtgggcgccaacggcaacctggtggacgcggtgaccaaggcgcccagcgtgttcgcgttcgcgctggtgcaagtgaccatccacctaggcatcgtgctcgccgcagggaagctgatggggttcgagcggaagccgctgctgatcgcgtccaacgccaacgtgggcgggccgacgacggcggcggccatggcgacggccaaggggtggagctcgctgatcgtgccgggcatcctggtgggcatgttcgggatctccattgccacgtttgttggcatcgggttcggcatgtttgtgctcaggaggatctgcggcgcctaaccaatctatagtactaacaattcaattggtttatatatagctgtgatcaataaataataatggaggagtagtagcaatgaagaatcatgcatgcatttcaatgaaaagtgtaaacattagaagaagaagaagaagaagaagaaaatactgtattatttatcaagagtaatactattattattag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0107100, RefSeq:Os06g0107100