Os06g0128400

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Revision as of 09:01, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0128400| Description = The stop codon is not identified.| Version = NM_001063207.1 GI:115466145 GeneID:4339985| Length = 5401 bp| Definiti...")
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Gene Name

Os06g0128400

Description

The stop codon is not identified.

Version

NM_001063207.1 GI:115466145 GeneID:4339985

Length

5401 bp

Definition

Oryza sativa Japonica Group Os06g0128400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1503212..1508612

Sequence Coding Region

1503350..1503483,1503608..1503708,1504399..1504490,1504835..1504935,1506186..1506276
,1506616..1506674,1506764..1506884,1506959..1507027,1507321..1507373
,1507688..1507796,1507895..1508065,1508148..1508306,1508561..1508612

Expression

GEO Profiles:Os06g0128400

Genome Context

<gbrowseImage1> name=NC_008399:1503212..1508612 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:1503212..1508612 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgaacaacggcgcggggaccctcaggtcaacctccatcaacggcgtcaagctctactccatcaccggcaaccgctacgtcgccccatgggtcctctcgaagaagaagcgcgccctccgcaaggacgcagagtatcagcggaggctggatttgatccatgacctgaggttcgagaccgccaccaccaagatcaaggtgacaccggatgagcagtatgtgatcgcctcaggtatttaccccccacaagttaaagtctatgaattgaaggagttatcaatgaagtttgagaggcacatgatttcagaaattgtagatttccaggtccttggtgatgattactcaaaacttgcatttttgtgtgctgaccgttctgtatgcctgcatgcaaagtacggtagacactatagcttgagaattccaagaatgggaagagatatggcatatgattgctggtcttgtgatttgctttgcgctgcttcatcaccagatgtgtatagaatcaatttagagcagggacgattccttgcatctctttcatctcaatctccagcaataaatgtggtttctcggagtaacatacatgggctcattgcttgtggtggtgaggatggtgtggttgagtgctttgatatgaggagaaaatcttctgttggcagaattaacacagctgtctctcctgaagattttaatcaggaggtcacatctctgcaattcgatgaaaaccaaggataccttatggcagtagggagcagcacaggaaaggtagcaatatatgatctacgtatgtcttcccctttgcgagttaaggatcatatgtatggtagcccaatattaagtattaagtggcaccagacacttaattctactgaacctaagctgattactgctgacaagcatatagtgagagtttgggatcctaatacaggaaataacatgactagcattgaaccagatggtggtactatcaatgatgtttgtgttttccggaacagtggtttgatgttattagctttggacaatagccagatccctgcccactttattcctgcattgggccctgctccaaagtggtgctcgcatcttgataatctaacggaagaaatggaagagaagacagagaatattgtatatgaagatttcaagtttttaacaaaagatgagatggatcgatatgatctctctaagtacattgatcagggtcttgtgagagcgcatatgcatggatatgtgatgaaacttcagctatataagaagctactagctactagtgctgttgatcctgagaatattcaagagaaggttaagc</cdnaseq>

Protein Sequence

<aaseq>MASNNGAGTLRSTSINGVKLYSITGNRYVAPWVLSKKKRALRKD AEYQRRLDLIHDLRFETATTKIKVTPDEQYVIASGIYPPQVKVYELKELSMKFERHMI SEIVDFQVLGDDYSKLAFLCADRSVCLHAKYGRHYSLRIPRMGRDMAYDCWSCDLLCA ASSPDVYRINLEQGRFLASLSSQSPAINVVSRSNIHGLIACGGEDGVVECFDMRRKSS VGRINTAVSPEDFNQEVTSLQFDENQGYLMAVGSSTGKVAIYDLRMSSPLRVKDHMYG SPILSIKWHQTLNSTEPKLITADKHIVRVWDPNTGNNMTSIEPDGGTINDVCVFRNSG LMLLALDNSQIPAHFIPALGPAPKWCSHLDNLTEEMEEKTENIVYEDFKFLTKDEMDR YDLSKYIDQGLVRAHMHGYVMKLQLYKKLLATSAVDPENIQEKVK</aaseq>

Gene Sequence

<dnaseqindica>139..272#397..497#1188..1279#1624..1724#2975..3065#3405..3463#3553..3673#3748..3816#4110..4162#4477..4585#4684..4854#4937..5095#5350..5401#gaattttccctccaacctgctaaaaccctagcacccgccgcccccgacggcgccgctcgacgacgagtcgccggcgtcggtcgccgacgagagctagggcaagtgcggcggtacagggtttcagaggaggaggggagcatggcgtcgaacaacggcgcggggaccctcaggtcaacctccatcaacggcgtcaagctctactccatcaccggcaaccgctacgtcgccccatgggtcctctcgaagaagaagcgcgccctccgcaaggacgcaggcatcctaactcgcctcacgctcatctgctctctctattttgggttcttttttcttgtgcaaatgacatgtattttctcatttattgtcgtgttgctgtcctttttttttgggggtctttttagagtatcagcggaggctggatttgatccatgacctgaggttcgagaccgccaccaccaagatcaaggtgacaccggatgagcagtatgtgatcgcctcaggtatgcgagctcgctgaatccaccattttctgcaccggcgttgctttgatcaggttaaactccacagtgcatactcagaaaggcatataactaacatataccctggaataaaaggcagtgcgtcaatataacgtaatggtggttcaggagtcagttcgcataagttgctgaaggaataggtgtccaacaatatctttagtctgtagtgtctttctgcgtccatgtccacacctataattgagctttcatccttgcctcactcagatgagttcgcatagtctagcgaagttaagatgaaagctcatgttctgggtgcgagttggcattggagcatcacacaattatcgtggaatgctgccgtccccctactatgtcattggcttgcgcttcatcgtccccctactatgtccttggcttgtgcttcatttgaagtcagagtcaaaacatttaaaccactaaggcgtttcttggagaagcttgcgtttatgtttgcttattgtgagtccaactttgaataatcccatgccttcagaaacaatccatgtaattcatgctctacaccttttttctttagtttgtaatatcacttgttagtttaatcttcacctttaatgtgtttcagtattgtcactttcatcagattgtttacacctctgtatgtaagtggaattcttctgtctatgatgtcaggtatttaccccccacaagttaaagtctatgaattgaaggagttatcaatgaagtttgagaggcacatgatttcagaaattgtagatttccaggtgggactaggctctagtgaagctcattcctcttttactatggagaagacatttgaattttccacaaatcagaaacttgcattttcattagctgtgtaacaaattagattgttaacttagactgtagtacatctctgttgaatttattttgcttatgagagttttatactttccgctatgagttcatgctttgtcgtgggatgtaatttaaagtatttccacattgatacaaaccattggagattaactgctcaaaattgtctactatgcttgtaggtgccaacctctgtatctttccttttgtatattttctatctaataacacatattgcatctttctgtaggtccttggtgatgattactcaaaacttgcatttttgtgtgctgaccgttctgtatgcctgcatgcaaagtacggtagacactatagcttgagaattccaaggttagtctgtccttatcacctacatcctatttcttatatacttttcatgcactaactacttggccctttggtaaagtgaagcgacatcttcaagaacacataaactgtcagaattaatatttgaaccattaacattctaacttccctcctgcctctcatgctgattaaacccagctcattttaaacgctactcttctgtgctcctactgctgattaggtgcatgttaagtcatcgacttggttgcattgctttagcccacctcctgctgctcatgctgaaaaggccaactatttgggcatttttggccttggcactggctgcataatttccatttcgtcgctgccaaggatgagatatatctcaggtttttttttgagtctttggagtctgatcaggatgaagctttagcaaaactaaaacaacatgatcacatcattttctcttcttttccgtgatttccaaacaaagtagtctagagaagataacagtgagcatggtaataaaatcaataattttcatctggcattgacagtattctgtttaattttctccatcttgcacctccatgtctgcctcttgatttctacatgcaaattcctgcagcaatacatggagtatcacatgtagtatagtagtactaaacagccacctgttgccagatgcagacttagttatatgggctggtctggattagtaccaaattttgccctaccaaagttttggcaacttaaattgtgtcatcttgatgtttggtttggtgccaaattttgccacactagttctaagttctaattagcagtactataccctatcaaatttggtagtgcccaaacctgcctaggttttcgtactaccaattatttggtatggtacatttttggctccaccaatcttactgaaggatatttctcgcatttcattgttctgtcttaattcaatacattttgactgccctattatcaacattcttttagtgtcttatggccagtcagagctatgtaattattgttggttacatgtttagtatgctagaaagtagtaagagctccctgttgcctgtgcaaacatagttgtctatctgctgcataatgattttttcttttagtttctacattttgtatctcttcttatatcatgggtctaaactaagcttctttgagatgatgataactgataacactatagtaatggaatgtttcaatacataacttgccttaattttgcatgttgctgatttccattttgacagaatgggaagagatatggcatatgattgctggtcttgtgatttgctttgcgctgcttcatcaccagatgtgtatagaatcaatttagagcaggtctgttttctttcttcatcattgatatgtattttaaatatctggttaccttagtcttaggaaaaatcatactatactttgtttggcacctgttagtacagaaccaagatagagatgatacttaattaggttgtttgaatgtaagcctaactatagctttatcgcatatcctctgattaatttttctcatcatctatcctgaatctaactaaatattcttcatataccttgtattaagttgctaatagttgcaacattacaatggtgttttcttctcatcatttgctttcagtcttttcagagaatgaatttgatcatttcttaatgtacttaatgcagggacgattccttgcatctctttcatctcaatctccagcaataaatgtggtttctcggaggtagttctttgttattgacttgtatatttttgaaaatgccaagcttatcaagtagttcaattctctctttttatttgttgtactcccagtaacatacatgggctcattgcttgtggtggtgaggatggtgtggttgagtgctttgatatgaggagaaaatcttctgttggcagaattaacacagctgtctctcctgaagattttaatcaggtgttgcattgtggagtagctaattgttacatttttgacgttattctgggtgttctcatgctttaaaattgcaggaggtcacatctctgcaattcgatgaaaaccaaggataccttatggcagtagggagcagcacaggaaaggtgaggttcatcattattctcctttgattttcactgccacctaagttgcaaattcttttcctgaatttatagtttttattatacttactgccattgtactaccagagttaactaatttatttctgtattctgtaacaagctatatgcagtttcatatctagcgttttcagcattaccttttcttcggtgatggataggcatattactttatatgttcatggacaacccaatctgtaaaaatgacgatttttgtttatcattttttagtcttaaatgtttgggattttctgcaggtagcaatatatgatctacgtatgtcttcccctttgcgagttaaggatcatatgtaagttcggtatcttttcttttaaaaagaaaaggtttcatgctttcatcataaaccatattcctttagtacatgtcaaagctataaggacttttggagaaaatgagatactcttactagatgtgattctctatgaaaatcttattgtgaaccccacctagtttttcaaaaagttattctcttggctccaagtcaggatcatcttatcttataaaagcaaaggtgctgctggtgggggattgagccgtggtagccaatagctgaaatgttcctgcattggataatatattatcatgtacttgctgttattgcaggtatggtagcccaatattaagtattaagtggcaccagacacttaattctactgaacctaagctgattactgctgacaagcatatagtgagagtttgggatcctaatacagtgagttcttccatttttctttctttggaaagtgcaggcttcattttttcctggaaggcattaactttgttggatgatggccttacccttttctacagggaaataacatgactagcattgaaccagatggtggtactatcaatgatgtttgtgttttccggaacagtggtttgatgttattagctttggacaatagccagatccctgcccactttattcctgcattgggccctgctccaaagtggtgctcgcatcttgataatctaacggtgagtgaataattttcactatttttctagttctaataaaccttggctgaacactaccaactatgaatttctccttgaacaggaagaaatggaagagaagacagagaatattgtatatgaagatttcaagtttttaacaaaagatgagatggatcgatatgatctctctaagtacattgatcagggtcttgtgagagcgcatatgcatggatatgtgatgaaacttcagctatataagaaggtaaactgttttcgtggacatctaagtgaattcatgctgctgtaggatggttgcagtcaacctctctagtaacatgaagactcttttgtggaccagtttttttttgtcattatgtatatcccatctaaagccatctgaccttagagttgaatataaaaatggacttgctatatttgtatttttgtatgtgtggttgggttgcaggaacgaatacattggacatgctctttactaacattttcatttcttttcagctactagctactagtgctgttgatcctgagaatattcaagagaaggttaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0128400, RefSeq:Os06g0128400