Os06g0131100

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Revision as of 09:02, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0131100| Description = WD40-like domain containing protein| Version = NM_001063229.1 GI:115466189 GeneID:4340007| Length = 5535 bp| Defini...")
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Gene Name

Os06g0131100

Description

WD40-like domain containing protein

Version

NM_001063229.1 GI:115466189 GeneID:4340007

Length

5535 bp

Definition

Oryza sativa Japonica Group Os06g0131100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1647618..1653152

Sequence Coding Region

1647633..1647766,1647913..1647975,1648053..1648121,1648502..1648558,1649386..1649540
,1649670..1649725,1649869..1649962,1650756..1650819,1651046..1651128
,1651252..1651343,1652037..1652143,1652407..1652470,1652639..1652779

Expression

GEO Profiles:Os06g0131100

Genome Context

<gbrowseImage1> name=NC_008399:1647618..1653152 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:1647618..1653152 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccctggccgaagccgagaacccgccgcgccgccgccgacctgcgccggaccccgtcgcggtgctccgaggccaccgcgccgccgtcaacgacgtctgcttccacccctccctcccgctcatcttctccggcgcggctgacggggaactcagggtttgggacacagcgagccaccgcactgtctcctcggtttgggctcatggtggatcggctggtgtatattcagtggctgctagcaccagacttggaaacaaaatcattagtcaaggtagggatggatcatgcaaatgctgggaaatcgaggaagctgggctttcacggagggccctatatacaatcagaacaagtacataccatttctgcaaaatgtcactcgttaagtcaacatgttctacatgctgcacacaatctggcttgatctccgcaactggtgatattgagtcacaaagcacagttactgaagaacgtgaactaggcacttgctgtaaaggaccaaatataatggcaatcgctggtcaagaatcatcgcaggttgaactttgggatattgataacgcaataaaggtaatgtgcttgcctgaaacaggcagcgctaatctggctgatcacccgaccaagcaaagaggactatgcatggctgtgcaagctttcttcccttgtggtgcagcttatgtaaatattttgtcaagttacgaagatggaagcacacttttgtgggatgtacgaaatcctggtctacctgtatcctcagtgaaatatcactcagaatcagctttatccattgctattgatgggctatgcaatggggggatctcaggaggtgctgatgataaaattgtcatgtttggccttgatcatcaaaagggtgcatttattctcaggaaagaaataaaacttgagcgaccgggtatagcaggcactgcaattcggccagacaacaagattgcagcgaccgctggttgggatcacaggattcgtgtgtatagctacagtaaaggaaacgctctagcagtgttaaagtatcacagtgcttcgtgtaatgcagtgacattctcatcggactccaagctgttggcttcctgctcggcggatactacggttgcattatgggagctctatcctcccaaaacagatagccaagttggtctcaaaacgagagatgaaatatcccaataa</cdnaseq>

Protein Sequence

<aaseq>MALAEAENPPRRRRPAPDPVAVLRGHRAAVNDVCFHPSLPLIFS GAADGELRVWDTASHRTVSSVWAHGGSAGVYSVAASTRLGNKIISQGRDGSCKCWEIE EAGLSRRALYTIRTSTYHFCKMSLVKSTCSTCCTQSGLISATGDIESQSTVTEERELG TCCKGPNIMAIAGQESSQVELWDIDNAIKVMCLPETGSANLADHPTKQRGLCMAVQAF FPCGAAYVNILSSYEDGSTLLWDVRNPGLPVSSVKYHSESALSIAIDGLCNGGISGGA DDKIVMFGLDHQKGAFILRKEIKLERPGIAGTAIRPDNKIAATAGWDHRIRVYSYSKG NALAVLKYHSASCNAVTFSSDSKLLASCSADTTVALWELYPPKTDSQVGLKTRDEISQ </aaseq>

Gene Sequence

<dnaseqindica>16..149#296..358#436..504#885..941#1769..1923#2053..2108#2252..2345#3139..3202#3429..3511#3635..3726#4420..4526#4790..4853#5022..5162#ctcgcagcccgagccatggccctggccgaagccgagaacccgccgcgccgccgccgacctgcgccggaccccgtcgcggtgctccgaggccaccgcgccgccgtcaacgacgtctgcttccacccctccctcccgctcatcttctccgggtacgctctcccctcgaccccccaaaaccccccttgcctgattctccgccgcagcagcgcgtgtgtatgagccctcgcgcttgtgatcacgctctcggtaacatctcctctgcttttttgcattttggggtttgctcttcatccagcgcggctgacggggaactcagggtttgggacacagcgagccaccgcactgtctcctcggtttggtaatttatttccgcgtcaacgattatggttggttcgttttgagggatacttgatgcgagggcatacgattttgcagggctcatggtggatcggctggtgtatattcagtggctgctagcaccagacttggaaacaaaatcattaggtgagtgaacagaggtgattttttcaggagttgctggctgtaggtttgcatcattataggatgctattgcaacaggctagataagaagcatccgtagctgttatgcgttaaaacatcgggttgaatcagtgtaatattttcgatttgagtacacagccttttcggatcggaattgcattgcaagtaggattgaacctcttcatatcatatatgaccgtattatctttctgattattcagtctagacagcatcagcgcattgtactatacagatggaacataaaaataactttagtagcatattttgagttgagtgcctctcacattgttacgatttggattgaattttgatcgatatatctgtttctgatgctgaggcagtcaaggtagggatggatcatgcaaatgctgggaaatcgaggaagctgggctttcacggtatgactcattgcacatgaagtgtaataggagttagaattggatctttctttggatggaacatgctaaggattgacatacaatttttaaaaagaaaaaatagaacatgctacctttaacataaattaggacttggttaatagtaggctttaccaatgtaaatgcaaggagaagaagacatgggcatacatatagacaaaagatattttgaatactagaagagatatacaacccatcaagagaagtctttgcaagacaacttttactcctacacatgtaggcctcattaggtttgatgccaccaaaccaagtgtatctatcctgaaactacctgctatatactccaccatttattgcatctgctccacaaagtccatctgctcaggtaattggatactccatcctgttgtcctcattctgctgcaagtgcatccaccagagcataagtgtaatgctattaatgttttgtcagtatatttaacctgattatagtctgtagggcaggtccccatatgcctcttgaagatcttatagctcttaaataataaaagaatatatataccaacttagtgctatcatattcttgtgtcaatggactttacatgatctgtagtggtaaattgatgaagaaacttaaacaaactagtcagagcctcctcggtatttgttgactagcaccttgtcctaattaagatgataagtgtaaggtccagaaggaatatggtaaaacacatacttgtcaaccttctttgtttgagctgtgtttcatttgtgtttcttatttgagtttccgtggcatgcaaatccaatttcttgggttctttcaggagggccctatatacaatcagaacaagtacataccatttctgcaaaatgtcactcgttaagtcaacatgttctacatgctgcacacaatctggcttgatctccgcaactggtgatattgagtcacaaagcacagttactgaagaacgtgaactaggtagtgcatgatttcagcatctcaaataaaagagagcaactagaaacttgatcactcttgacaagaaattggtgtcagagaactccttagtgactctcttcatgattgacttaatggtgtatttcctaggcacttgctgtaaaggaccaaatataatggcaatcgctggtcaagaatcatcgcaggttagtttttaatcttgactttgagcaaaacatagcgtgatgcaatagaacataactaattcatcgttttttttgtgcctacatattttcttgccctgttttcaattttttcatgttgtcactaaataacaaagtgaatacaggttgaactttgggatattgataacgcaataaaggtaatgtgcttgcctgaaacaggcagcgctaatctggctgatcacccgaccaagcaaagaggttcatctccacaacttctgctgtaattgttttgtcttatgaaccataccaaatgtaggttgagctagcataaggtggtacgtctggtgccgatctgatctcttgcttggtagaaccttcaagcatttatactcctaggttctggttagccctcaccatgtctttggtgccatattttttaaagcataatgttagttttcaagaaatagtcggaagaagcaggaacttgatgataaattaggagctgcattggtgattatagactggctgttggcattgtactaggacaaggatacctttgtcattgccttgaaggataaatacttgctgagcatagctgtatctttgtgtatttggcttaacagaattatttacgagccgtgtcactattttacttccttatgcacaataccgagtgtattcatgctagcgtagcatcccatgatgctgtcccatccagcaggaaattgtcaaatcctgccgtcagccagaaatatgtgctttacaagtcactgaagcaaatgtttcatagatgtggtttaggatgaatacatcttctatgatatgagactgcacgtatgttcttcagttcttcactgtagtagcttgctaagttcacgaaattgcgcttcacatcaatttatctattatagctagtgtgctgttatgccgctctgcatttgcacactgcaggacatttataacaattcatttgaattgcccaatgacattcgtttttcccttgcattcatgctttaagtaatccttgaaaacttcatgctgttgattgtaggactatgcatggctgtgcaagctttcttcccttgtggtgcagcttatgtaaatattttgtcaaggtttgtgtccagatatttttttgtcaaggttaagcgtgcaaacccaagcacatttattaacagccattacctaggctcctgttttgccacggcagaaagccttttatcccagttgttgttgtttaacagtgtgtttttcccttgcataaagaaaacaaatgttcctttgcttaacatcttttggactgttctcattttagtaaacctttgcttttatggtgatcagttacgaagatggaagcacacttttgtgggatgtacgaaatcctggtctacctgtatcctcagtgaaatatcactcagaatcaggttgctctccattctgaaaattactattttagttatttaacctatccttttttcagtagtagctatgtttatatctttggtgtttggaaataatgtatgatctaataagagtctggtgtgcagctttatccattgctattgatgggctatgcaatggggggatctcaggaggtgctgatgataaaattgtcatgtttggccttgatcatcaaaaggtgtgcaccaaattttctgatttcctgtttcctgctacacaaatctttactcttgtcgtgaaaggtgcaccttgtgagtacaaaaaaccatgttatgtacatgcagtacaaagctagcccaagttgacattgattttatgctttctctgatgtcgtgctattaattatctccaattatctgctagtcattcaattatataaagaaataagctgctaaggagatctttgcattcattatttttctgtaatattgacttcaacgtcatctgctattgtcttcttgacaaggttcataagcatttcaatttcctaaatgatgcagtatactgaaggttaagtttagcagtgtttaacactcagaagtaggcctagagttggagactgcactattatccttctgatatccacttctgacatctgtgatatttgaatcccttcatatctgaagcaagaaacacgcgcacaaccatggtttttttattagctagatgggtagtaattcttttcctcagggaggatagtagttatttccagttacaggcatataaacattctacatttcataacaaaattatcaccgctggaaaatgcatttgcttctgttgtagcttttgcaattacattagtgaatgctggtttaacttggtaagccatcttttgatttactggcatgcagttttgttccaattacagggtgcatttattctcaggaaagaaataaaacttgagcgaccgggtatagcaggcactgcaattcggccagacaacaagattgcagcgaccgctggttgggatcacaggtttgtttttcccattctgttccttgatgaccaggatgttaacataagctatttttagtggcttcctaaatcctgaattaacatgctcaagttagtaggtacattatacatatgatttaatatatataatctattaagtagtaatacctgagtgacgagtacaaattgtactaatgatggctcctttgtgattttggtcgctactaatcttgtcttctagttgatgattatgatccaagtttgcaattgttacatcattgcaggattcgtgtgtatagctacagtaaaggaaacgctctagcagtgttaaagtatcacagtgcttcggtatgcagcttctctcatataataacattttctttcaaaatttaccatgctgtttttcctcagctcaaaagggaaggaatgcctgtcggtccctgatatcaccttatattgatcgttcagccaaagcttcacggaacataactttgtgttcgtccttttggcttgcagtgtaatgcagtgacattctcatcggactccaagctgttggcttcctgctcggcggatactacggttgcattatgggagctctatcctcccaaaacagatagccaagttggtctcaaaacgagagatgaaatatcccaataatatggccgggccttcctttgaggcgatgcctctgcctcttgactggaggagcacacggcggatgaattagagttagtttatgacatgttttgagtgtttttgacacggcggaagatcacgtggctagctcatactgattcatgggggtcggagttttaatctccgaccctccttgcatcacttttccttcattggatgtctttctcgctttagcgaaatcggtgtgggaacgagagatgaaatatcccaattaatatggccgggtcttccattgaggcaatgcctctgcttcttgactagaggagcataagacggatgaattagagctactttatgatttgttttagcatttatgaaagaaacttagcttgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0131100, RefSeq:Os06g0131100