Os06g0131500

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Revision as of 09:02, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0131500| Description = Glycoside hydrolase, family 17 protein| Version = NM_001063231.1 GI:115466193 GeneID:4340010| Length = 2167 bp| Def...")
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Gene Name

Os06g0131500

Description

Glycoside hydrolase, family 17 protein

Version

NM_001063231.1 GI:115466193 GeneID:4340010

Length

2167 bp

Definition

Oryza sativa Japonica Group Os06g0131500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1690886..1693052

Sequence Coding Region

1690909..1692180,1692721..1692798

Expression

GEO Profiles:Os06g0131500

Genome Context

<gbrowseImage1> name=NC_008399:1690886..1693052 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:1690886..1693052 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctaccatttccaacgttgtcacgaacacttattgtgcttctcccactccactgctccgccggcgagccaccgccatggcgcttcgtgtacagctcgtcctcgccgtcgccgtggttgtgccggcgttgggggtggcggcgggtggtgctaccttgggggtgaactatggccaggtcgccgataacttgccgccgccgcaggcggcggccatgctcctccgctcgctgaacgccaccaaggtgaagctctacgacgccgacgcgcgcgttctcagcgcgttcgctggctccggcgccgacttcaccgtcggcctcccggaccgcctcgtcccgcgcctcgccgccgacccgtccgccgccgcggcgtgggtgcgcgccaacatcctgccccacatcccggcgacgtccatcaccgccgtcaccgtcggcaacgaggtgctcaccggcaacgacagcgccatgctccggtcgctcctcccggcgatgcagtcgctccacgccgcgctcgccgcttgcaacctcacctcgcgggtggtcgtcaccacggcgcactccctcgccgtgctctcctcctcgttcccgccgtcctccgccgcgttccggcgcgagctcctcccgtacatggcgcccctcctcgcgttcctcgccaagaccggctcgccgttcctcatcaacgcctacccgtacttcgcctacaagggcgacccggagcacgtggacctcaactacgtgctgttcgaggccaatgccggcgtcggcgacccggcgacggggctgcgctacgacaacatgctgcacgcgcaggtggacgcggtgcgcgccgcgatctgcagggcaaactacggcaaggcggtggagatccgggtgtcggagaccgggtggccgtcgcggggcgacgacgacgaggccggggcgacgccggagaacgcggcgaggtacaacggcaacctgatgcggctggtggcgcaggggaaggggacgccggcggcgcccggcgaggcgctgcaggtgtacgtgttcgcgctgttcaacgaggacatgaagcccggcccagcgtcggagcggcattacggcctgttcaagcccgacggcacgccggcgtacgacgtcggcgtgaaggctccgacgattggcggcagctggaaggggagagccaatggcactagcggcggcggcgccggcgggctggtcgtggcggaagggcccggaggggcagacggtgcagggcagggcactggattctacaccgtgtcagcagcagcacacaaggtgaagaggtggcggtgctgggaaagcttgttcgcaaccgttgttctagtcatgtcgtccggcctgtgttggtcatga</cdnaseq>

Protein Sequence

<aaseq>MATISNVVTNTYCASPTPLLRRRATAMALRVQLVLAVAVVVPAL GVAAGGATLGVNYGQVADNLPPPQAAAMLLRSLNATKVKLYDADARVLSAFAGSGADF TVGLPDRLVPRLAADPSAAAAWVRANILPHIPATSITAVTVGNEVLTGNDSAMLRSLL PAMQSLHAALAACNLTSRVVVTTAHSLAVLSSSFPPSSAAFRRELLPYMAPLLAFLAK TGSPFLINAYPYFAYKGDPEHVDLNYVLFEANAGVGDPATGLRYDNMLHAQVDAVRAA ICRANYGKAVEIRVSETGWPSRGDDDEAGATPENAARYNGNLMRLVAQGKGTPAAPGE ALQVYVFALFNEDMKPGPASERHYGLFKPDGTPAYDVGVKAPTIGGSWKGRANGTSGG GAGGLVVAEGPGGADGAGQGTGFYTVSAAAHKVKRWRCWESLFATVVLVMSSGLCWS</aaseq>

Gene Sequence

<dnaseqindica>24..1295#1836..1913#atgcatgcacgcgctttttgtttatggctaccatttccaacgttgtcacgaacacttattgtgcttctcccactccactgctccgccggcgagccaccgccatggcgcttcgtgtacagctcgtcctcgccgtcgccgtggttgtgccggcgttgggggtggcggcgggtggtgctaccttgggggtgaactatggccaggtcgccgataacttgccgccgccgcaggcggcggccatgctcctccgctcgctgaacgccaccaaggtgaagctctacgacgccgacgcgcgcgttctcagcgcgttcgctggctccggcgccgacttcaccgtcggcctcccggaccgcctcgtcccgcgcctcgccgccgacccgtccgccgccgcggcgtgggtgcgcgccaacatcctgccccacatcccggcgacgtccatcaccgccgtcaccgtcggcaacgaggtgctcaccggcaacgacagcgccatgctccggtcgctcctcccggcgatgcagtcgctccacgccgcgctcgccgcttgcaacctcacctcgcgggtggtcgtcaccacggcgcactccctcgccgtgctctcctcctcgttcccgccgtcctccgccgcgttccggcgcgagctcctcccgtacatggcgcccctcctcgcgttcctcgccaagaccggctcgccgttcctcatcaacgcctacccgtacttcgcctacaagggcgacccggagcacgtggacctcaactacgtgctgttcgaggccaatgccggcgtcggcgacccggcgacggggctgcgctacgacaacatgctgcacgcgcaggtggacgcggtgcgcgccgcgatctgcagggcaaactacggcaaggcggtggagatccgggtgtcggagaccgggtggccgtcgcggggcgacgacgacgaggccggggcgacgccggagaacgcggcgaggtacaacggcaacctgatgcggctggtggcgcaggggaaggggacgccggcggcgcccggcgaggcgctgcaggtgtacgtgttcgcgctgttcaacgaggacatgaagcccggcccagcgtcggagcggcattacggcctgttcaagcccgacggcacgccggcgtacgacgtcggcgtgaaggctccgacgattggcggcagctggaaggggagagccaatggcactagcggcggcggcgccggcgggctggtcgtggcggaagggcccggaggggcagacggtgcagggcagggcactggattctacaccgtgtcagcagcagcacacaaggtaattgattgattgattaattaattaattataattacattttgcaaccgcataattacttcattgtttggttacttttttttttgttattagtgtggttcttgattgaatgaattgtgattgagtttggtacaaggaaagtatagtttaagtatgcagtgttgtgtcggttcagacgttcagttgatgctgcgctagctagttgctttgcagtgcttctgttgctaatcaattaaatcatcaatatagtctaattagtatgtgtaacaagtttggtatgcacgtacaaaaccaagttttaaaattgcaaagaggggaaaatgctgctgtgctagctcccagatcatactcctactttgctattccatacccaaaaaaaaaaaagatttgctcatcaagtgagtaatcatgcttggcactagctagtaatcaatcaaaaggttagctacctgctgtgacagtattggagattatactagccctcctttacaagtaatgctttgtgtcacacactttatcttcatgttccttttttcataggtgaagaggtggcggtgctgggaaagcttgttcgcaaccgttgttctagtcatgtcgtccggcctgtgttggtcatgacctgaagagttgaagatgttcatgaagaattgaagatgcagtagaggaggagatcgatctgcagcatttgcagacaaaggagaaatgagcttgaacaaaaacgccattgattcaattgattcttgtgttttcgctgtcctccgattggtgttggttgatgtgtagtttgtgtactgtaaggaagagagatgtaagggacattacatgatacactggattattaattagttcagattcagatttctgaaaggatt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0131500, RefSeq:Os06g0131500