Os06g0136100

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Revision as of 09:02, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0136100| Description = Conserved hypothetical protein| Version = NM_001063259.1 GI:115466249 GeneID:4340039| Length = 3784 bp| Definition ...")
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Gene Name

Os06g0136100

Description

Conserved hypothetical protein

Version

NM_001063259.1 GI:115466249 GeneID:4340039

Length

3784 bp

Definition

Oryza sativa Japonica Group Os06g0136100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1913225..1917008

Sequence Coding Region

1913417..1913515,1913602..1913640,1913729..1913868,1914242..1914449,1914550..1914721
,1915376..1915750,1916753..1916946

Expression

GEO Profiles:Os06g0136100

Genome Context

<gbrowseImage1> name=NC_008399:1913225..1917008 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:1913225..1917008 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctctgccaacaagcggtgccaatccaccgcgggcgcaggagcgcccggcggcggtggccgctggccgtccggcggccgccgtcgccggctgcccggctgcttccggagtcgtcctcaaccacagcaggtgcccttgacctccttcgctacgggcggaacttccgtcgagcctcgccgccgccgcgcccaccgttggtaaattctgctgagccttcgtctgcacaagtgctgcgagaaccagatgtttccttctctgtggggttgctcagtaatacagcatcgaaagaaccgataactgcacacacctcttcctcttcctctccacttactgtgcagcatgacgacactgaaacttcgacgccatcacagtgctgcctgtggtcatctcctgggtcatccattttggtcaggagacctcgtggttggtattttgtattctacatcaggatggatcctggggggtgtttccacatgtatcccgatgtgggttgtgggccatatcagagtctgtcagaagttgatgatgctataaaccaacatcttcatgacctgcggattccagaaatgggtgaggagcttgataggctccctctaatggagaagatgatacggcaagcgatgtactggcctgacggcaagcggaaacgttgcaagtcagctgggtattttgaaaaagacaagtgccatttgatccaagctttagtggagaagtataatgaggatcataatcttttgggggattttgcgtatgaacttaaggattttttgcaacatggagtaatttatgaggatcaaaggcagtaccaccatttgaatttcactgcgaaggtgaaaagagctgatgggtgtggtgtggagaacctattctttgctgaaatatcacatatgcaaggagaatatgaatgggtggtcagctgttgctgcataattaaacctagtgctaacggtcattgctatggctgtaggaataatggttatgttggcatgaagcaccctaacaatgatgcatacagtggtggtcatttggatggatatttaccttttggggtcaattcctatgcgcgcaataatgatgaggaactcagtgtcaaggatgaggaagatatgctaagacgtatgtacaagggcctagataagccaggcggattcaagagacccatccctaaatttgcaacacgaattgtgtggaaaactgaggaggaagctggtgtggaagctggttga</cdnaseq>

Protein Sequence

<aaseq>MLCQQAVPIHRGRRSARRRWPLAVRRPPSPAARLLPESSSTTAG ALDLLRYGRNFRRASPPPRPPLVNSAEPSSAQVLREPDVSFSVGLLSNTASKEPITAH TSSSSSPLTVQHDDTETSTPSQCCLWSSPGSSILVRRPRGWYFVFYIRMDPGGCFHMY PDVGCGPYQSLSEVDDAINQHLHDLRIPEMGEELDRLPLMEKMIRQAMYWPDGKRKRC KSAGYFEKDKCHLIQALVEKYNEDHNLLGDFAYELKDFLQHGVIYEDQRQYHHLNFTA KVKRADGCGVENLFFAEISHMQGEYEWVVSCCCIIKPSANGHCYGCRNNGYVGMKHPN NDAYSGGHLDGYLPFGVNSYARNNDEELSVKDEEDMLRRMYKGLDKPGGFKRPIPKFA TRIVWKTEEEAGVEAG</aaseq>

Gene Sequence

<dnaseqindica>3494..3592#3369..3407#3141..3280#2560..2767#2288..2459#1259..1633#63..256#atcgaacccaaattccgaacctccaatcgaattcctccgattccccggcgacgcagaacccgatgctctgccaacaagcggtgccaatccaccgcgggcgcaggagcgcccggcggcggtggccgctggccgtccggcggccgccgtcgccggctgcccggctgcttccggagtcgtcctcaaccacagcaggtgcccttgacctccttcgctacgggcggaacttccgtcgagcctcgccgccgccgcgcccaccgtatgtgcatcccctctcctctctctctctcgctccttccttttcccgcgatttagttcgcttttgctatgcgtgtattgattttactgctagtctccacgtattgttatctctcgacgctatttgtgatttaagtacttcgattttctatgtgtgatttaggcagcgttcgttctgggagattggagatagattgcacatcgttttccgcgtgcacgcttccaaactattaaacggtgcgttttttgcaaaaaaaattctataagaaagttgctttaaaaaatcatattagtctatttttgaaatttaaaataattaatacttgattaatcatgcacctcgttttgcgtatcttcccaatcttctctatctcccctttctcaaacacagccttaggcaccgttcgttccagggtgtttggggagattgagtctcgttttccgcgcgcacgcttttcaaactactaaacggtgcgttttttgcaaaaaatttctataggaaagttgctttaaaaaaccatattaatccatttttgaaatttaaaatagttaatacttaattaatcatgagctaatggctcacctcgttttgcgtatctttccaatctcctcaatccccttcccctcaaacacacccttagtgtcgttcgggaggatagaacagtgtattttataagactgatagacagtatacgtcttctgtaagacttgcgatggattagtggaagtagcagtttgtgacactagattcttgggagtggagaggcaggacaggggggaaaagcgctgtttgctagcacaaacataaccggtgtattcatatgtgatttctagggattaatgtaacaaattggtaaagtctatatagtttttgacccctgctaacttggccactgcaaaatgatccttctgcaatatttatttagaatgaataaatatgttttgattgagatccttccagaataaaattatttctcttactcattgagcttgtttgctacaggttggtaaattctgctgagccttcgtctgcacaagtgctgcgagaaccagatgtttccttctctgtggggttgctcagtaatacagcatcgaaagaaccgataactgcacacacctcttcctcttcctctccacttactgtgcagcatgacgacactgaaacttcgacgccatcacagtgctgcctgtggtcatctcctgggtcatccattttggtcaggagacctcgtggttggtattttgtattctacatcaggatggatcctggggggtgtttccacatgtatcccgatgtgggttgtgggccatatcagagtctgtcagaagttgatgatgctataaaccaacatcttcatgacctgcggattccagaaatgtgaggcttcttaactttgttttatcttgttatctgtttatttgttgcaaactcttgtggttggatacttggatgtatttatttagggcagacagtaactgccttttatatttcggtgcatgtttcatctcatggagcttcaggttgatttaggatcatagtaataattaggacacacatatacacttcaaaatcagttgaattgatttgacaacaaaaaacttttgagagcttgaatcagaatataatagtatttgagaaaaaaatcagaatataatggatgacccagaccctagttatagaaaagatgactagttctcgtttacaaaaataccgggcttccataatttctgatgttatattctgaattgctgcatgttagtctaattaattgctcaaaacagtgtcccatgttccaagtgagttagaaatctgaaatttaatgatgctttgagagtatataatctaggcatggaaacaactatcactctccattgttttatcatgtgctgtgttaaatttatctttctacgtgaactaattgaggaacaccagacttggtaacatgtgcaaacaactttatagcacattgtatcgacaactttgagaaagtacagcatactaatcatacatgatcttcattgatctaattaggggtgaggagcttgataggctccctctaatggagaagatgatacggcaagcgatgtactggcctgacggcaagcggaaacgttgcaagtcagctgggtattttgaaaaagacaagtgccatttgatccaagctttagtggagaagtataatgaggatcataatcttttgggggtatgttctttctctctccacacacacaaatatatattatctatatcttatgtcttactattttaacatttgtttatctgatccatgcgttttgttttaggattttgcgtatgaacttaaggattttttgcaacatggagtaatttatgaggatcaaaggcagtaccaccatttgaatttcactgcgaaggtgaaaagagctgatgggtgtggtgtggagaacctattctttgctgaaatatcacatatgcaaggagaatatgaatgggtggtcagctgttgctgcataattaaacctagtgctaacggtaatatatcttctgcacaattttagttcaaatttcttatcctatataactttctgcttaaaaaattgtatgtaacagcaaattggtaagttgtgcatgccttttggcttaggatatatgctgtagtgcatgtgccccttcagcaacttgtatcaaaacactacctcagtgttcacgtttgaaatagtctgtctagctcacactaatagggagtactgtttcttttcgatataattgaaaatttctataggatgtgattcattatccttgtactgaagacatgccttatttaccattgatcacttatcagcatggtaaccatctgcccagttactttggctgttaaaactgacaaatatccccatttttgaaggtcattgctatggctgtaggaataatggttatgttggcatgaagcaccctaacaatgatgcatacagtggtggtcatttggatggatatttaccttttggggtcaattcctatgcgcgcaataatgatgaggaactcagtgtatgacaatttatttctgacaagcatctatcattgttgtattgctctaagtactcaacagttaatagcctgatcttctcttttacaggtcaaggatgaggaagatatgctaagacgtatgtacaaggtaataacacaacaagatctacttccacctgtacacatgttgctcggttcattgttgattgagtgctccttgtttttattttttagggcctagataagccaggcggattcaagagacccatccctaaatttgcaacacgaattgtgtggaaaactgaggaggaagctggtgtggaagctggttgaagctggaaccttgcatttttctactagatgtgttaggcaaatgtgctatcgtatacattcatgtaacacaagttaaacttatcaccatcgaacttgtccaccagtgccccagcagtagaagcgcatcttatcacaattggtggtaaatttagtggaatggatgaacatccacgctaatggttgctgaaagct</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0136100, RefSeq:Os06g0136100