Os06g0136600

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Revision as of 09:02, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0136600| Description = Similar to Enolase 1 (EC 4.2.1.11) (2-phosphoglycerate dehydratase 1) (2-phospho- D-glycerate hydro-lyase 1)| Version...")
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Gene Name

Os06g0136600

Description

Similar to Enolase 1 (EC 4.2.1.11) (2-phosphoglycerate dehydratase 1) (2-phospho- D-glycerate hydro-lyase 1)

Version

NM_001063262.1 GI:115466255 GeneID:4340042

Length

5072 bp

Definition

Oryza sativa Japonica Group Os06g0136600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1930306..1935377

Sequence Coding Region

1930561..1930641,1931105..1931161,1931245..1931296,1931382..1931470,1931560..1931610
,1931705..1931899,1932024..1932104,1932214..1932276,1933054..1933128
,1933203..1933283,1933362..1933463,1933545..1933625,1933730..1933816
,1933929..1933976,1934366..1934430,1935011..1935074,1935229..1935297

Expression

GEO Profiles:Os06g0136600

Genome Context

<gbrowseImage1> name=NC_008399:1930306..1935377 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:1930306..1935377 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggtgacgatccagtccgtgaaggcgaggcagatcttcgacagccgcgggaaccccacggtggaggtggacgtgggactcagcgatggcagcttcgcgaggggcgccgtgccgagcggtgcttccaccggaatatatgaggccttggagttaagagatggaggatccgactatcttggcaaaggtgtactcaaggctgtgagcaatgtaaacactattattgggccagcactcatcggaaaggatcccactgagcaagttgacattgataacttcatggttcaacagcttgatggaacctccaacaactggggctggtgcaaacaaaagcttggagcaaatgctattcttgctgtttcacttgctgtgtgcaaagcaggagccatggtgaagaagattcccctttaccagcacattgcaaatcttgctggaaacaagactctcgtgctgcctgtacccgctttcaatgtgatcaatggaggatcccatgctggaaacaaacttgccatgcaggagttcatgatcctccctactggtgcatcctctttcaaggaggccatgaagatgggagttgaggtgtaccaccacttgaagagtataatcaagaaaaagtatggccaagatgccacaaatgtgggggatgaaggtggctttgctcctaacattcaggaaaacaaagagggcctcgaactgttgaaggccgcaatagctaaggctggctacacaggcaaagtggtcataggaatggatgttgcagcttctgaattttacagtgaaaaggacaagacttacgatcttaacttcaaggaggataacaacgacggttcacacaaaatttcaggtgacagcctgaaagatgtgtacaagtcctttgtttctgagtaccctattgtgtcgatcgaagatccattcgatcaggatgactgggctacctatgccaagcttactgatgagattggacagcaagtgcagattgttggggatgaccttcttgttactaatcccacaagggttgccaaggcaattagtgaaaagacttgcaatgctcttctcttgaaggtgaatcaaataggctcagttactgagagcattgaggctgttagaatgtccaagcgtgctggatggggagtgatggcaagccataggagtggtgagacagaggataccttcattgctgacctctcagttggtctgtctacgggtcaaattaagacaggagctccctgtcggtcagagcgtctggctaaatacaaccagctgctcaggatagaagaagagctgggcgatgctgcagtttacgctggagaaaaattcagagcccctgtggagccgtactaa</cdnaseq>

Protein Sequence

<aaseq>MAVTIQSVKARQIFDSRGNPTVEVDVGLSDGSFARGAVPSGAST GIYEALELRDGGSDYLGKGVLKAVSNVNTIIGPALIGKDPTEQVDIDNFMVQQLDGTS NNWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVIN GGSHAGNKLAMQEFMILPTGASSFKEAMKMGVEVYHHLKSIIKKKYGQDATNVGDEGG FAPNIQENKEGLELLKAAIAKAGYTGKVVIGMDVAASEFYSEKDKTYDLNFKEDNNDG SHKISGDSLKDVYKSFVSEYPIVSIEDPFDQDDWATYAKLTDEIGQQVQIVGDDLLVT NPTRVAKAISEKTCNALLLKVNQIGSVTESIEAVRMSKRAGWGVMASHRSGETEDTFI ADLSVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGDAAVYAGEKFRAPVEPY</aaseq>

Gene Sequence

<dnaseqindica>4737..4817#4217..4273#4082..4133#3908..3996#3768..3818#3479..3673#3274..3354#3102..3164#2250..2324#2095..2175#1915..2016#1753..1833#1562..1648#1402..1449#948..1012#304..367#81..149#cttcaggtggaagccacaaaacgaacgcgaactcgagcggcgaagaagaagagagagagagataaggcggcggcagcgagatggcggtgacgatccagtccgtgaaggcgaggcagatcttcgacagccgcgggaaccccacggtggaggtatacgcgagacattcattcgatcccctggaattggaatttcaaattttgttgcgtcgattcggttctgtttttgtatctatccggttcttgattttgaagcgctgagaagttttctgtttgtgttcaaatctggggtttgcgctgtgcgcaggtggacgtgggactcagcgatggcagcttcgcgaggggcgccgtgccgagcggtgcttccaccggtaagcagatggctgaggcactggctcttccattctgaagaacaatgggtgtttttttttgtagtgataattcgttatatgttaataccatttgatcttcgatttccaagaaacgcgtatcttcgatatcatcgaatggttggtcccaataattcttgggcatggcagtaatgaattggtgtgtgcgtggaaagagatgtttgcatagttatttagatgggacaggggattgatgatttttgaaaacactcaaacagtaatagtaacacgatcatctctgtctgtcaaggctgtgtattgaaattcattagctcatcgcccaaagcacttgcaatgtggaccgtaactgaaacaagagaaacctcttcagtttttgtttttttaagaaagttgaaatatcttcagtttgttataaacttatagagatgacaatattagcacgttattcaagcgctgatggtttccttcttaaagatcttagttcatgtgtttttttacgctgatcttagatttgtcgtttaccttggcaaaggtgtacttaaaattcattagatttttctgtttcctgctttgactgtaggaatatatgaggccttggagttaagagatggaggatccgactatcttggcaaaggtgtactcaaggttagcttattggctttccctcgaatgttaggactattttacaatctataaataacttgttcgtttatattgcattttgattgagcagatcatatttcagctgaacagttaacaatccaaagtctctgtaatttatgtttaagtaaggcagcgtgtacgaagataaccgtcatatgtttgtctatctcttgtgtgggtcacaaaattggttcaaaggaactatttggacctgcatttttcaatttgcaagtgcgagaaaatcattgaacttttgttggaaaaactgattgttaggtgttttctaccattttctaacaactgatggcacctatgtatgccaatcaagtaagtcctccatgtctaatggtgataatgtcctcttttggcaggctgtgagcaatgtaaacactattattgggccagcactcatcggaaaggtatgcatcccatactacatgattttattgatatcatacacacacacacacacacacacaacaaagaaaaaaaaaggatagctttcttaactaatggtgttttttgttgcaggatcccactgagcaagttgacattgataacttcatggttcaacagcttgatggaacctccaacaactggggctggtgcaaacaaaaggtattactccattacttgtgtagtaacaatgcttttggatctaattgcatcagacactgtactctttgcgctgacttcctttgatgtggtaaaaacaatgacagcttggagcaaatgctattcttgctgtttcacttgctgtgtgcaaagcaggagccatggtgaagaagattcccctttaccaggtctgttaaacaactgcatcggtatataactttgttcttctgaaacttcagaacctatgctaaaacatcaagaaattgcagcacattgcaaatcttgctggaaacaagactctcgtgctgcctgtacccgctttcaatgtgatcaatggaggatcccatgctggaaacaaacttgccatgcaggtaaaatattgcttgaataacaagaccatgtcgatgcatgattcagtcatattctctgctcatttagctgctgtacaggagttcatgatcctccctactggtgcatcctctttcaaggaggccatgaagatgggagttgaggtgtaccaccacttgaaggtgaaaaaaaaaaatcaaccttttcattttgtatctgaaacttcagaatgtgttatctgaacttctttatacagagtataatcaagaaaaagtatggccaagatgccacaaatgtgggggatgaaggtggctttgctcctaacattcaggtaatcctccataaatctctgcacggctttcaagtcaataaaacttcttagaatgtcccagtattttttaggcaaatctgacgggtttctcattatgaagtagtagaagtgtagaactgatcgtaaacataagcagttaacgtcacttaagatgttctgagaatatgagtaaagctaaactattcagatactatcaactaaacaacatctgtattagtaaaactaagtagctttatttaaaagttttgacaagagttttcaaatgttttaaataaggtggtggtattggttccgttcagaatactttattagagtagtagtacagcgagttggaccgtacgtacttgggccgtctacggctaatttcggccggatgtacacaaaccagcccaactaatatgagccaggaccgcaccctgttctgggcctagtggtatgggccgcataaacaccactgatcccattcaggtccaactaatatgggccgcaccatcacaccggaggaataagttcactttggctcccttaactattggccgaatctgatttatacccctaaaccacgataccggaatctcgttccagccgaagtagtatggactatggacaaaacattaatctgggccggatacgtggatctaacgatggatggtagtcggggcccactggtcagtctcatgtgtccaaaattgtgcgaccccttggatcttagtgaagcaatatttgcagttacttttcatttttgttgcatacatgaactgaaatattcatgtgcaggaaaacaaagagggcctcgaactgttgaaggccgcaatagctaaggctggctacacaggcaaagtaattcccttttttctcttaatttagctcataattcaagcatctctttgattgtatttgcgtgatcattatgattcatcaatatctattgatttcgtttatatggcaggtggtcataggaatggatgttgcagcttctgaattttacagtgaaaaggacaagacttacgatcttaacttcaaggaggatgtaagatcggcctgcaacttcttgtcaaatctttatctgcacatagttctttgtgttgttccatgaaactacaataagaaataaaactcagtgtgtattaacatgtcttaaatttcttgaccagaacaacgacggttcacacaaaatttcaggtgacagcctgaaagatgtgtacaagtcctttgtttctgagtaccctattgtgtcgatcgaagatccattcgatcaggatgactgggctacctatgccaagcttactgatgagattggacagcaagtgcagattgttggggatgaccttcttgttactaatcccacagtaagttacagttagttaattaattaattgctactaatctcagttagttctctcgaagtttatgttttaacaatgcaatacttgccttttacagagggttgccaaggcaattagtgaaaagacttgcaatgctcttctcttgaaggtattgtatgctgttcagagttgctagttcttttgctaggacattgaatgtagtgcaatattgattataccatctgtttatgctgtcaggtgaatcaaataggctcagttactgagagcattgaggctgttagaatgtccaagcgtgctggatggggagtgatggcaagccataggaggtaagagttgcaagttgtaactctttcagctgttttcattgtttgtaggatttgtttcatttaactatttttgtcatcttttcagtggtgagacagaggataccttcattgctgacctctcagttggtctgtctacggtatgggttttggttaaacttgaatttgattgttctgagtaccttcaatggtaataacatcatatcccacaattttgtttcagggtcaaattaagacaggagctccctgtcggtcagagcgtctggctaaatacaaccaggtaagcctcttgcctcaaacccaaattagtcattactacctcctttgcagccaaatacactttgaatctctgcttgttttcatggagccttactcactagccactactagtaattcatccgacaagaccattaaaatactccttttgctgtgtgattttgtaatctatagtggaagtgattatgtgtgtgaattaaattacatttcatttagcatggcttgatagtttaagcaggaatctatgatagaacactgggcaaagaacggcgatttgcaaacttgtcactaggtagtattatgtttcagcgggagtctgtttgcttgtcctggaaggagcatcattttttttttccagagaattattttagactttttttcccagaaaattcaatgaagaggttccacacaacactattgttttggtgatatatacaatttgtgtcgttgcttgcttgtggttgcagctgctcaggatagaagaagagctgggcgatgctgcagtttacgctggagaaaaattcagagcccctgtggagccgtactaaaccttggcaccttgcggtgatcttgtgcctatggaccatggtgccatcaatctactactgcgtttttacacgagtctacaagggcaataaaattagtacttcttgacagtcccagaaattgcttagttaccctcgctttttcgttaatggccagattgtttgcttactactgtgttgacacacttgagcaccaatatgtaagatcaataaaagagcaaatcgcttgatttttcatcataaagtatttttttcccc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0136600, RefSeq:Os06g0136600