Os06g0138200

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Revision as of 09:02, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0138200| Description = 2OG-Fe(II) oxygenase domain containing protein| Version = NM_001063273.1 GI:115466277 GeneID:4340053| Length = 4269 ...")
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Gene Name

Os06g0138200

Description

2OG-Fe(II) oxygenase domain containing protein

Version

NM_001063273.1 GI:115466277 GeneID:4340053

Length

4269 bp

Definition

Oryza sativa Japonica Group Os06g0138200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2029472..2033740

Sequence Coding Region

2029506..2029698,2029786..2030304,2031536..2031621,2031727..2032037,2032569..2032640
,2032738..2033407

Expression

GEO Profiles:Os06g0138200

Genome Context

<gbrowseImage1> name=NC_008399:2029472..2033740 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:2029472..2033740 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgcctcctcctccgcctccgccggcggcgaggccgacgcgatggcgctcgtgcaggggtacaacgccgacgagctcgccatcgccggggagttcctcaccacgtggctccccttcctctccgcgggcctctgcgcctcctgcgccgactccctccgcagccgcgtctcctccctgctgcccccgcaagccgaggaatccccgtcgtcgccgccgccgcggatcgatcagattgagccctcggggtgggagtccgatccggctacggctcacccgcagcatctgccgttcgagccgagcggatgggactcggatccgccgcagctgccaccggagcaggagcagcagaagcagaagccgcagccggcggagaagccgcggaagtcgtgggcagacatggctcaggaggacgagctcgccgccgcggcagaggaggacgcggcggcagccgcggctgatgacggcgaggaagggagcgaggctggtaggccgggtgtgcagctgacgagggagcagcgggagctgaggcggttccggaacgtggtgcggaggaaggatttcatctgttttgagagggtcaatggtcggctcgtcaatatcctcgctggcctggaacttcattgcggtgtgtttagcgcggccgaacagaagcgtattgtcgactacgtatacgatcttcaggagatgggcaagcacggggagcttggagatcgtacgtatacggaaccccaaaggtggatgcgtggtaaagggcgagtaacaatccaatttggatgctgttataattatgccacggacaagaatggaaacccaccaggcattattcgaactattgcttctgatccgatgcctagcttatttaagatcatgatcaagagattggtacggtggcatgttctaccaaagacttgcataccagacagttgtattgtcaatatatatgaccctggagattgcatcccaccacatattgatagtcatgattttgttcggccattctgtactgtttcattcctcagtgagtgcaacattctttttggatctactctgaaaattgctggccctggagagttcactggttcacttccaattcctctgcctgttgggtcggtgcttatcctaaatggcaatggtgctgatgtagcaaagcattgtgttcctgcagttccgaccaaaaggatatccattaccttcagaaagatggatccagcgaagcgtccgttcaatttccgagatgatccagaattgcttaacataattcctctagaaacagctgtacaagaaactggcagatcatcagatgaaggtaagggcaagcagcctgacatacagatcagaaatccgagcaaagcacacaggaacaagaaatctaaagtaagaacatctcctggaaagggtggacggggcggcattctcggagatggacctcctcaatatgcacaagctcaagtcactggcatttcgtcacagcaaaacttccatggccagcctaccatctctggttcaagtgctgagagagaaagacgccctgttggtccattgagagagtcaagatatcagcaggatgcacctggcatgcaatctaacatggatggtatcagagagcgggcaaattggttggctcaagagaggatgcatggtaacagcatgaattcgattgacgatggcacggaatctcaggaaaggaggcagcgaatggagcacagacagatattgatgatcaaccgcacgatcaacgatgatatggattccctttcaatcgggagccatgaatctgaccagactcgtgtaagcgtacgaacactatacaacaagccaaggaggaccagggtaaacctggatgagtaa</cdnaseq>

Protein Sequence

<aaseq>MDASSSASAGGEADAMALVQGYNADELAIAGEFLTTWLPFLSAG LCASCADSLRSRVSSLLPPQAEESPSSPPPRIDQIEPSGWESDPATAHPQHLPFEPSG WDSDPPQLPPEQEQQKQKPQPAEKPRKSWADMAQEDELAAAAEEDAAAAAADDGEEGS EAGRPGVQLTREQRELRRFRNVVRRKDFICFERVNGRLVNILAGLELHCGVFSAAEQK RIVDYVYDLQEMGKHGELGDRTYTEPQRWMRGKGRVTIQFGCCYNYATDKNGNPPGII RTIASDPMPSLFKIMIKRLVRWHVLPKTCIPDSCIVNIYDPGDCIPPHIDSHDFVRPF CTVSFLSECNILFGSTLKIAGPGEFTGSLPIPLPVGSVLILNGNGADVAKHCVPAVPT KRISITFRKMDPAKRPFNFRDDPELLNIIPLETAVQETGRSSDEGKGKQPDIQIRNPS KAHRNKKSKVRTSPGKGGRGGILGDGPPQYAQAQVTGISSQQNFHGQPTISGSSAERE RRPVGPLRESRYQQDAPGMQSNMDGIRERANWLAQERMHGNSMNSIDDGTESQERRQR MEHRQILMINRTINDDMDSLSIGSHESDQTRVSVRTLYNKPRRTRVNLDE</aaseq>

Gene Sequence

<dnaseqindica>35..227#315..833#2065..2150#2256..2566#3098..3169#3267..3936#gggtggggcccacacggcagcgagagacgcttcgatggacgcctcctcctccgcctccgccggcggcgaggccgacgcgatggcgctcgtgcaggggtacaacgccgacgagctcgccatcgccggggagttcctcaccacgtggctccccttcctctccgcgggcctctgcgcctcctgcgccgactccctccgcagccgcgtctcctccctgctgcccccgcaaggtaacaatcccgtgtgctgggttcgccgtagttagggtttttgtgctgttgcctcttacgcccccccgttcacctcgactctgacagccgaggaatccccgtcgtcgccgccgccgcggatcgatcagattgagccctcggggtgggagtccgatccggctacggctcacccgcagcatctgccgttcgagccgagcggatgggactcggatccgccgcagctgccaccggagcaggagcagcagaagcagaagccgcagccggcggagaagccgcggaagtcgtgggcagacatggctcaggaggacgagctcgccgccgcggcagaggaggacgcggcggcagccgcggctgatgacggcgaggaagggagcgaggctggtaggccgggtgtgcagctgacgagggagcagcgggagctgaggcggttccggaacgtggtgcggaggaaggatttcatctgttttgagagggtcaatggtcggctcgtcaatatcctcgctggcctggaacttcattgcggtgtgtttagcgcggccgaacagaagcgtattgtcgactacgtatacgatcttcaggagatgggcaagcacggggagcttggaggtgagatttaagctgcatggagattcgatatgtttttctatggcgctagttgaatttggctaaattttcatgtaaagtcttgagttttgagaaatgctttaatgaaaagggttttaggtcaggattatgtaaaattttaggcaaaggttttagctgtaattaaggtcatgctttgctacttaggctatggtagttgtggggatatggatcataggcaaacatttagatgtctatatgcaccacagtagttctatcgtgtagaactggaacttgtatagtgttctcgtgcaaagtagaaagccgaagaattattataaaattggttttctcatgtcttgttctatgtggtatgcactcaaagctacaaacttttttggtaattattctactaaatcattggatctacctaccacaagtagcagattagcttttgtgatttcaagcaggaagataaatatggtatttgataaattataggtattgccatcataacataatcagccatatttgacaaaaataacacagtttcaccctactacacaatcagaagcatctgccgaaatctgtctgtccaggagaagcgtagcggatagcaaaacattttcattgttttctgtacacatgattctgtcataatggtgtttccccatttgtgtaaacctcaatatgtttcaatgtattatttacagtaatctctgagtgtttttggtttctttgcttatatgctgcataagcgttctcagcatggatattaaaacagacatgcatgattttctgtgcttcttacagtcgtgcacaccacaataaccacgattgaagtaaatgtaacatgttgagtgagatgcctgaccttcattccagtttacatatctgcgttcttcttttcaatttaattaatttaatattcaagctatgcactatttatctactgagggcccagtataacactaacaaatggccacactttagagtaccctgaagcacctaagcctgtttgattcaccttaggccattggaccggaatagaatttctcatccttatttgggtgagtgtatactatatattgggaagcctactctatttagtgctatccaaggtccttctttctgctttacaaatgctatacgcacatgaattttcttgggctcacagctgcatttatttatttgccatgttttgtttatttgtatttttgtatatctaaatccaagcataatatccccctgtcagatcgtacgtatacggaaccccaaaggtggatgcgtggtaaagggcgagtaacaatccaatttggatgctgttataattatgccacggtacatactctagttttatcctctgatcccatcagcttgaatactgcagtggtactgatttaattcacatgtgaatccatctaaggtttgaatctgtgatgacaggacaagaatggaaacccaccaggcattattcgaactattgcttctgatccgatgcctagcttatttaagatcatgatcaagagattggtacggtggcatgttctaccaaagacttgcataccagacagttgtattgtcaatatatatgaccctggagattgcatcccaccacatattgatagtcatgattttgttcggccattctgtactgtttcattcctcagtgagtgcaacattctttttggatctactctgaaaattgctggccctggagagttcactggttcacttccaattcctctgcctgttgggtatgttctcatgcttttcgctgtgctgatagattatttgtggtagccagttgtgctatttgggatgttaacaaattgattttatttattattgttttaaacttgattactcatgaattcaaaggctgtgtagacttctcattcgatttcttgaatggtattgcatggtatgattactaagggcctgtctggctgtcatacttctgcagctgtgctgctgctgtagagattgtatgcgcagtactgtagctgatggctgtattgcagccaaatttagtcctaccgaacaggccctgaacttttctcctttagactttgcttgaagtttttgctgagagagatttctactccatacttgtttgttgctgtgtttccttctcattggattgtcataaactctaaaatactaactgtatgtaatttttgcattggccactttaataatattcaattattcgtgtctcatcatgtctttcagttttcttctgcagctctttagttctcttatatactaaatacaaacattcacaggtcggtgcttatcctaaatggcaatggtgctgatgtagcaaagcattgtgttcctgcagttccgaccaaaaggttgtgatactgatatcctgttctatcatttggcttttggaactcaattcctttgcctgtataacatttgaactctgacacactaattaaaacacaggatatccattaccttcagaaagatggatccagcgaagcgtccgttcaatttccgagatgatccagaattgcttaacataattcctctagaaacagctgtacaagaaactggcagatcatcagatgaaggtaagggcaagcagcctgacatacagatcagaaatccgagcaaagcacacaggaacaagaaatctaaagtaagaacatctcctggaaagggtggacggggcggcattctcggagatggacctcctcaatatgcacaagctcaagtcactggcatttcgtcacagcaaaacttccatggccagcctaccatctctggttcaagtgctgagagagaaagacgccctgttggtccattgagagagtcaagatatcagcaggatgcacctggcatgcaatctaacatggatggtatcagagagcgggcaaattggttggctcaagagaggatgcatggtaacagcatgaattcgattgacgatggcacggaatctcaggaaaggaggcagcgaatggagcacagacagatattgatgatcaaccgcacgatcaacgatgatatggattccctttcaatcgggagccatgaatctgaccagactcgtgtaagcgtacgaacactatacaacaagccaaggaggaccagggtaaacctggatgagtaagcaagcaagccaagcctgtactcaaatctgtgaacttgcttttgctaaaaaagaaaaaaaaaactgtgaacttgctgttgggaatgttgatacctgaaagcatacttgcgctgtatatttcaggaggtgtgaccagaacaccagcagatataacttactaaaacacttagtattgatttgatgaaatttgtcagctgatagtcaggcccctattctgtagataagagtattttttgggaatgctgtaattgtgacttaatatggatgcatttctcgttgatgaatgaggacctctcaataatttgattccactgtgaccacaacatttcttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0138200, RefSeq:Os06g0138200