Os06g0138700

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Revision as of 09:02, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0138700| Description = Cyclin-like F-box domain containing protein| Version = NM_001063276.1 GI:115466283 GeneID:4340057| Length = 4412 bp|...")
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Gene Name

Os06g0138700

Description

Cyclin-like F-box domain containing protein

Version

NM_001063276.1 GI:115466283 GeneID:4340057

Length

4412 bp

Definition

Oryza sativa Japonica Group Os06g0138700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2042909..2047320

Sequence Coding Region

2042909..2043064,2043159..2043305,2043391..2044230,2045191..2045291,2047133..2047277

Expression

GEO Profiles:Os06g0138700

Genome Context

<gbrowseImage1> name=NC_008399:2042909..2047320 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:2042909..2047320 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gaagtgccgaccggcgacgacgaaaggccggcggagagagatcccctcaccaccatggggatgctggatctgatgcgcctcatgtccatccagcgccagcgggaccaggagcgccgccgccgccaagcccaagctcccccccgtgatggattgattgctttacgggctaaaagaaagggctcaccctgccaacaagacggcgattctcagggtgctgctgacatagagataccaagccttccagaggacatctggcgtcttatacattccttgatgccaatgcgagatgctgcccgagctgcctgtgtgtctcgttcctttctaagtttgtggagatgccaccccaacctcaatttcagtagtgaagcatttgggttgaacaaaaatgcatgtggaaaggaagaattggctggacttttctacagcaaagtcgaccacattctcaaaaggcactcaggcatcggcgtgaaaaaacttaagattcagatatattcagattatagtgggaaaggctcttcatatctcaacaattggcttcagatttctgttaaaccagggattgaagaactcataatttcactgacccagttccaggcaaagtacaatttcccatgctctcttctgtcgaatgggagtggagactcaatccaatatcttcacctttctaactgttccttccacccaacagtcacacttagtggcttaagaagtctgatgagactgtatctttgttgtgtgcgtattacggagaacgagttaggctgccttctttcccattctcttgcattggagcagttggaaatcaggtactgcgataggatagtttgcctgaaggtaccttgcctactgcagcggctcatctccctgaaggtgtttgggtgtgacaagctgaaactgatagaaaatgaagctcctaatgtctccatttttgcatttcaaggggacaaaacggaactgaaacttggagaaactttgcaaataaagagcctatgcatggtccgctctggttatgtttatcatgctcgtgctgaacttccatccatcatgccaaatcttgaatctcttgccataaagtcacgcaaagagacggcctttgcaccgaagctgtgtagcaaattcctctgcctcaggcacttgagcattggccttattggatttttcccagcctatgactatttatccctggcttcttatatttatgctgcaccttctctggagacttttgacttgaatgtaatgcagcggaacgtgcagagtgtttcaatttttgcacatcctgcagatctgagatcaatacgagaagagaagcatcacaaccttaagagtgtgacggttacatcattcatctctgtaaagagcttggttgagctgacatgccatatccttgag</cdnaseq>

Protein Sequence

<aaseq>EVPTGDDERPAERDPLTTMGMLDLMRLMSIQRQRDQERRRRQAQ APPRDGLIALRAKRKGSPCQQDGDSQGAADIEIPSLPEDIWRLIHSLMPMRDAARAAC VSRSFLSLWRCHPNLNFSSEAFGLNKNACGKEELAGLFYSKVDHILKRHSGIGVKKLK IQIYSDYSGKGSSYLNNWLQISVKPGIEELIISLTQFQAKYNFPCSLLSNGSGDSIQY LHLSNCSFHPTVTLSGLRSLMRLYLCCVRITENELGCLLSHSLALEQLEIRYCDRIVC LKVPCLLQRLISLKVFGCDKLKLIENEAPNVSIFAFQGDKTELKLGETLQIKSLCMVR SGYVYHARAELPSIMPNLESLAIKSRKETAFAPKLCSKFLCLRHLSIGLIGFFPAYDY LSLASYIYAAPSLETFDLNVMQRNVQSVSIFAHPADLRSIREEKHHNLKSVTVTSFIS VKSLVELTCHILE</aaseq>

Gene Sequence

<dnaseqindica>4257..4412#4016..4162#3091..3930#2030..2130#44..188#acaaattataactctcgttccccaattttgtgtgtgacgttgagaagtgccgaccggcgacgacgaaaggccggcggagagagatcccctcaccaccatggggatgctggatctgatgcgcctcatgtccatccagcgccagcgggaccaggagcgccgccgccgccaagcccaagctcccccccgtggtaaagaaactactcctcataagcttcctctcccacctccctctgtcactctctggtcaagcggcggcagcagcagcagcttcttgcgtttacggtgggggaagggaaccagatggacttgcttgcgcctctttttcctgtttcgttgggtgggtgtttatttagttttcttcacactagtttgtgtcgattattcgaatctgtatatatgtagtactagtatatacacaaaccaaaaagaaaaaaaaacatgtttttattgagcgcaaggtaggagatcaaaggtggtttatccgatccgccatggctggtggccggccaccaccgtcttgttccttttctctttaactagattgacgagacgtagggagagagactacactgtaactataaggtacccgcgtgttgctgcgggaattcttagaacaatatttgtgcgtatggtcgcatggatagcaaaaacactgaattgcattgaagtaagacaacctctttttgtgtgaatatggagttacggttttgttcaacattcaaatcagttgtgaaatatgaggatatatatcttggtagctgacaatttagatattaccgtgggcaacagaaaaagaaaaatgtttagtaatactgtgagaacttggctaatgatgataattcaaaatcatatacattgctccccaagttggataacagggttagcaaaaaaaaattcatattcagatatgaaagaaggttcagcagataaacatggctattaaaattcagttaccgaacaaggttcaccaactaaaaatttccatcaaaattaagagttttacgcacctcaatattatacttagactacgaatcaaccaactgatggtcttgtttcctgcattcttcaattgcttaaaaagaagaaaaggatctgacaatgaaaccacagctacatagggcatcgacagaaagtggttaaagttgtaactgcatatctacatagcagcatacgatagacacataattgaaaggtccagattagcatagcttcaagcatcataaaacatgaagctagtcatgggtggaaagattctgtggaaggacagggataataagcatattgatttgaacctgcgggagtggcatatcctgagagagataagttgtgttgggaaggctcatcagctagtgtcgttgaccagagtgagtttgtcatcgtcgccggaggatacagctcgtctttctctctcccatgaagatctggcagcatagctgagagcctttgagaggaaaggagaaggcatattgagggtaataaatgtccatggcggctgtcacttcaactcctagctgtttcaggttttgatagcgcagcgaacggtttcagcctttcaggtgagggagactcaaaggcggacatggaagccgaatggctcagttctcttgcgtcgtgttgcgctgagagtggagatggaacgatagcaggtaggatgttctggggtacgtaggaacgtttggttgggttttctgcgtgagagacactacatgcaatctgatggaaattaaggggtgatgtggcaaagcgagatgaccaaaaaaatactattaattgcactaattggggatgaattgtattggtttataggatactatgctatgcaaaataagaaaaatactatatgacatgctgaacttcagccatttccccttaaattgataacatgttggtttcttttacaaactgttagtgttgttgtacaaaaggggacaaaaaaaaaataacggattgccatgtgtgcaatggtgtgcttgcttgaattttctgtttattcctcaaatggatgtaaaccatgcatcttgtgctgcagatggattgattgctttacgggctaaaagaaagggctcaccctgccaacaagacggcgattctcagggtgctgctgacatagagataccaagccttccagaggtacaccataaataaaatgttgatgatgaaacatcttactagtagtgtagtacaagtaaattatgacgattactgcttgaatcgcacaaatcggtcgaccaacgttattaaagtttatgaacggagcactttgatgctataacctcctacagctgctgcatcggaactgtttttccagctgttgcacttactttcaatcacaaattgtctacacataatgctttcttctaagctggtggttcttaggctgggagtttctcaagtcaacatcaatgatgagcttttgccactagtctccatgctgtttctaacttccttaaattgtaccatctcaaaaacggttccgtgctaacaaatgttatctccgttagaccattgcagtcagtacatggtaattttgtgagccgcatgtccttgtaggatggcattcttgtttgattccccgcatctccccatcctgactccccgcatcttccccatcctgagttcctgacctagtgtatgaaaatccaagcaagtaaccaaacacaccttaatgtttctaacttcatatcaatttattttaacactgtagctgccaaaagttatttgattctgatacatatttaactgagctttctggttgtttatatattcagatattggtaccctatgcaaagtgcatgtccatttctgttccttttctgccattagacaattaaacatcattccatccattttatctggcacaattgcaaagaaacaaatagtgctgagcacttaatacatgatttgggtaagaacatatttgcctagcggaagtcaactatataattcatagtaatagtacataatcaggcaggtagcactggaccagttaaagtgttactccataagttaccatttttttcttccatctaattcaaccatttgtcttcacaattccaatgtttaacttctctcccatgcttgtgcaagcaggacatctggcgtcttatacattccttgatgccaatgcgagatgctgcccgagctgcctgtgtgtctcgttcctttctaagtttgtggagatgccaccccaacctcaatttcagtagtgaagcatttgggttgaacaaaaatgcatgtggaaaggaagaattggctggacttttctacagcaaagtcgaccacattctcaaaaggcactcaggcatcggcgtgaaaaaacttaagattcagatatattcagattatagtgggaaaggctcttcatatctcaacaattggcttcagatttctgttaaaccagggattgaagaactcataatttcactgacccagttccaggcaaagtacaatttcccatgctctcttctgtcgaatgggagtggagactcaatccaatatcttcacctttctaactgttccttccacccaacagtcacacttagtggcttaagaagtctgatgagactgtatctttgttgtgtgcgtattacggagaacgagttaggctgccttctttcccattctcttgcattggagcagttggaaatcaggtactgcgataggatagtttgcctgaaggtaccttgcctactgcagcggctcatctccctgaaggtgtttgggtgtgacaagctgaaactgatagaaaatgaagctcctaatgtctccatttttgcatttcaaggggacaaaacggaactgaaacttggagaaactttgcaaataaagagcctatgcatggtccgctctggttatgtttatcatgctcgtgctgaacttccatccatcatgccaaatcttgaatctcttgccataaagtcacgcaaagaggtatgagaaattttgcctgacacatgaatgagactagattctgtcttatgggttgtagcataattaatttgacctctttatgcagacggcctttgcaccgaagctgtgtagcaaattcctctgcctcaggcacttgagcattggccttattggatttttcccagcctatgactatttatccctggcttcttatatttatgctgcaccttctctggagacttttgacttgaatgtgagtagctgttcatatattattactgctatgaatgaaattagtagctgtgtggtggaaatgtcacttaaaatttctccctttcacatcctaggtaatgcagcggaacgtgcagagtgtttcaatttttgcacatcctgcagatctgagatcaatacgagaagagaagcatcacaaccttaagagtgtgacggttacatcattcatctctgtaaagagcttggttgagctgacatgccatatccttgag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0138700, RefSeq:Os06g0138700