Os06g0142650

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Revision as of 09:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0142650| Description = Similar to Avr9/Cf-9 rapidly elicited protein 11 (Fragment)| Version = NM_001187665.1 GI:297724460 GeneID:9269484| L...")
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Gene Name

Os06g0142650

Description

Similar to Avr9/Cf-9 rapidly elicited protein 11 (Fragment)

Version

NM_001187665.1 GI:297724460 GeneID:9269484

Length

1386 bp

Definition

Oryza sativa Japonica Group Os06g0142650, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2240754..2242139

Sequence Coding Region

2240754..2242139

Expression

GEO Profiles:Os06g0142650

Genome Context

<gbrowseImage1> name=NC_008399:2240754..2242139 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:2240754..2242139 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagagcaagacggccaagatcgtcgccggcgcggccgccgccgtgctgctggtcctcgagctcgctctctacctccgcttccggctgtcgcggccgttcttcctctccaccgccgtcatcgtctccgccgcgctgtcggcggccgccgcggcgctgctgcaccacgcggcgggcgagcggaggcgggcggcgcgcatggcgaggcggctgccgtcgatggaggacgagcggatccgcgtggagtacagctacttccgcaaggtcgccgggctgccgcgcaagctcacgctcgagtcgctggcggcggcgacggacgggttccagtacgccgtcgggcggggctcgtcggggacggtgtacaagggcatcctcgacgacggcacggcggtggcggtgaagcggatcgacggcggcgccgaccacgccgataaggagttcaagtcggaggtgtcggcgatcgccagcgcgcagcacgcccacctcgtccgcctcgtcggcttctgcctcgtcccgcgcgggccgcgcttcctcgtctacgagtacatggagcacggctcccttgacaggtggatcttctccccgcactccggcgatcgccgccgccggaggtacctgccgtgggcggcgcggtaccaggtcgccgtcgacgtggcgagggcgctcgcctacctgcaccatgactgccgcagcaaggtgctccacctcgacgtcaagccggagaacatcctcctcgacgacggcttccgcggcgtcctctccgacttcgggctgtccaagctggtggggaaggagcagagccgcgtcgtcaccacggtgcgcggcacgacggggtacctcgcgccggagtggctgctcggcgtcggcatcaccgagaagtccgacgtgtacagctacggtctcgttctgctcgagatggtcggcggccgccgcaacctgatgcaggcggagaatggcgacgacgggtcgtcggcgtcgccgcggtggacgtacttcccgaagatcgccggagacatggcgagggaagggagggtgatggaggtgctggacaggcgggtggtggagtccggcgaggcggtggaggaggcggcggtgcggaggctggtccacgtggcgctgtggtgcgcgcaggagaaggcgggggcgcgccccaccatggcgcgcgtggtggagatgctcgaggggcgtggcgccgccgcggaggccgtggaggcgccgccgccgtcggacatgatcgtcgtcgacctcctcgcgctcgacccggcggcgcgcggccccggcccgttcggcctgccgccgccggcggcggccagcgacggcgggatgcaggtgacgtcgtcggggatcagcaactcgttcgcgctctcctacctgtcgggacgatga</cdnaseq>

Protein Sequence

<aaseq>MESKTAKIVAGAAAAVLLVLELALYLRFRLSRPFFLSTAVIVSA ALSAAAAALLHHAAGERRRAARMARRLPSMEDERIRVEYSYFRKVAGLPRKLTLESLA AATDGFQYAVGRGSSGTVYKGILDDGTAVAVKRIDGGADHADKEFKSEVSAIASAQHA HLVRLVGFCLVPRGPRFLVYEYMEHGSLDRWIFSPHSGDRRRRRYLPWAARYQVAVDV ARALAYLHHDCRSKVLHLDVKPENILLDDGFRGVLSDFGLSKLVGKEQSRVVTTVRGT TGYLAPEWLLGVGITEKSDVYSYGLVLLEMVGGRRNLMQAENGDDGSSASPRWTYFPK IAGDMAREGRVMEVLDRRVVESGEAVEEAAVRRLVHVALWCAQEKAGARPTMARVVEM LEGRGAAAEAVEAPPPSDMIVVDLLALDPAARGPGPFGLPPPAAASDGGMQVTSSGIS NSFALSYLSGR</aaseq>

Gene Sequence

<dnaseqindica>1..1386#atggagagcaagacggccaagatcgtcgccggcgcggccgccgccgtgctgctggtcctcgagctcgctctctacctccgcttccggctgtcgcggccgttcttcctctccaccgccgtcatcgtctccgccgcgctgtcggcggccgccgcggcgctgctgcaccacgcggcgggcgagcggaggcgggcggcgcgcatggcgaggcggctgccgtcgatggaggacgagcggatccgcgtggagtacagctacttccgcaaggtcgccgggctgccgcgcaagctcacgctcgagtcgctggcggcggcgacggacgggttccagtacgccgtcgggcggggctcgtcggggacggtgtacaagggcatcctcgacgacggcacggcggtggcggtgaagcggatcgacggcggcgccgaccacgccgataaggagttcaagtcggaggtgtcggcgatcgccagcgcgcagcacgcccacctcgtccgcctcgtcggcttctgcctcgtcccgcgcgggccgcgcttcctcgtctacgagtacatggagcacggctcccttgacaggtggatcttctccccgcactccggcgatcgccgccgccggaggtacctgccgtgggcggcgcggtaccaggtcgccgtcgacgtggcgagggcgctcgcctacctgcaccatgactgccgcagcaaggtgctccacctcgacgtcaagccggagaacatcctcctcgacgacggcttccgcggcgtcctctccgacttcgggctgtccaagctggtggggaaggagcagagccgcgtcgtcaccacggtgcgcggcacgacggggtacctcgcgccggagtggctgctcggcgtcggcatcaccgagaagtccgacgtgtacagctacggtctcgttctgctcgagatggtcggcggccgccgcaacctgatgcaggcggagaatggcgacgacgggtcgtcggcgtcgccgcggtggacgtacttcccgaagatcgccggagacatggcgagggaagggagggtgatggaggtgctggacaggcgggtggtggagtccggcgaggcggtggaggaggcggcggtgcggaggctggtccacgtggcgctgtggtgcgcgcaggagaaggcgggggcgcgccccaccatggcgcgcgtggtggagatgctcgaggggcgtggcgccgccgcggaggccgtggaggcgccgccgccgtcggacatgatcgtcgtcgacctcctcgcgctcgacccggcggcgcgcggccccggcccgttcggcctgccgccgccggcggcggccagcgacggcgggatgcaggtgacgtcgtcggggatcagcaactcgttcgcgctctcctacctgtcgggacgatga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0142650, RefSeq:Os06g0142650