Os06g0144800

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Revision as of 09:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0144800| Description = Similar to GTP-binding protein lepA| Version = NM_001063318.1 GI:115466367 GeneID:4340102| Length = 5346 bp| Defini...")
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Gene Name

Os06g0144800

Description

Similar to GTP-binding protein lepA

Version

NM_001063318.1 GI:115466367 GeneID:4340102

Length

5346 bp

Definition

Oryza sativa Japonica Group Os06g0144800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2365747..2371092

Sequence Coding Region

2366202..2366376,2367072..2367131,2367332..2367472,2368184..2368297,2368381..2368452
,2368556..2368660,2368735..2368802,2369123..2369177,2369272..2369428
,2369593..2370343,2370752..2371045

Expression

GEO Profiles:Os06g0144800

Genome Context

<gbrowseImage1> name=NC_008399:2365747..2371092 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:2365747..2371092 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccggcgccgccgcgctccggcgatccgcgcgccgtgtcgtcctgccaggcgcctacgccttgtcccgggcgctacagcaccctgagcgcctcctctcctcccaggcttcgccggaccgcggcggggtgctgggttcggagcttgggctgtatcccccggagagggtcaggaacttctccatcatcgcgcacgtcgaccacggcaagtccacgctcgccgaccggttgctggagctcaccggcaccatcaagaagggccatggccaacctcagtacctcgacaagttacaggtagagagagagaggggaatcacagtcaaagcacaaacagcaactatgttctacagacatgctaacaaccaacttcctgcatctgatcagccagatgctccaagctatttgcttaacttgattgatactcctgggcatgtggatttcagctacgaagtatccaggtcgcttgcagcttgtcagggtgctcttttagtagttgatgcagcccaaggtgtccaagcacaaacaattgcaaacttctaccttgcatttgagtcgaatctaagcatcattcctgttattaataagattgatcagcctaccgctgatccagataatgtaaaggctcaactgaagaggttatttgacattgatccaagtgaagctctgctaacttcagctaaaactggtcagggccttagccaggtcttgcctgctgttattgagcggattccttccccacctggaaaatgtgattcacctgtacgcatgcttctcttagattcatactatgatgagtataaaggggtgatatgccatgttgctgttgtggatggtgctctccacaaaggagataagattgcatctgccgcaactggtcgcacatatgaagtccttgatgtgggcattatgcatccagagcttactcctaccggtgtgctttacactggacaagttggatatgtcataagcggaatgcgttcaactaaagaagcacgaattggtgatactcttcatcaagcaaagagtattgtcgaaccacttcctggtttcaagcctgctagacacatggtcttctctggtctatacccagctgatggctctgactttgacgctcttagccatgcaattgaaaaactaacatgtaacgatgcgagtgtgtctgttacaaaagagacaagcactgcacttggcatgggcttcagatgtggctttctaggattactacacatggatgtatttcatcagcggctagaacaagaacatggagctcaagtcatatcgacaataccgacagtgccatatatctttgagtatggtgatggaagcaaagtgcaagtcgagaaccctgcagctttggcttcaaatcctggaaagcgtatagcagcttgttgggaaccaacagtcattgcaactattattattcctagtgagtatgttgggccagtaattatgctttgttcagagaggaggggcgagcagcaagaatatacattcattgatgcccaaagggctttgttgaagtaccgattaccattgagggaaatcattgtggatttctacaatgaactgaaaagcataacatctggatatgctacttttgattatgaagattctgagtaccaacagtctgatcttgttaagatggatattttacttaatggtcagcctgttgatgctatggcaacaatagtccacaaccagaaagctcagagagttggacgagaattagtggataaactcaagaaattcatagaacggcaaatgtttgagatcactatacaagccgcagttggttcaaaggttatcgcaagggaaactctgtcagcaatgagaaagaacgttctggccaagtgctatggtggtgatattactcgcaaaaagaagttgctagagaagcaaaaagaagggaagaagcgcatgaagcgtgtagggtccgttgatattcctcaagaagcatttcatgagctattaaaggtctccaattcaaaatag</cdnaseq>

Protein Sequence

<aaseq>MAGAAALRRSARRVVLPGAYALSRALQHPERLLSSQASPDRGGV LGSELGLYPPERVRNFSIIAHVDHGKSTLADRLLELTGTIKKGHGQPQYLDKLQVERE RGITVKAQTATMFYRHANNQLPASDQPDAPSYLLNLIDTPGHVDFSYEVSRSLAACQG ALLVVDAAQGVQAQTIANFYLAFESNLSIIPVINKIDQPTADPDNVKAQLKRLFDIDP SEALLTSAKTGQGLSQVLPAVIERIPSPPGKCDSPVRMLLLDSYYDEYKGVICHVAVV DGALHKGDKIASAATGRTYEVLDVGIMHPELTPTGVLYTGQVGYVISGMRSTKEARIG DTLHQAKSIVEPLPGFKPARHMVFSGLYPADGSDFDALSHAIEKLTCNDASVSVTKET STALGMGFRCGFLGLLHMDVFHQRLEQEHGAQVISTIPTVPYIFEYGDGSKVQVENPA ALASNPGKRIAACWEPTVIATIIIPSEYVGPVIMLCSERRGEQQEYTFIDAQRALLKY RLPLREIIVDFYNELKSITSGYATFDYEDSEYQQSDLVKMDILLNGQPVDAMATIVHN QKAQRVGRELVDKLKKFIERQMFEITIQAAVGSKVIARETLSAMRKNVLAKCYGGDIT RKKKLLEKQKEGKKRMKRVGSVDIPQEAFHELLKVSNSK</aaseq>

Gene Sequence

<dnaseqindica>4717..4891#3962..4021#3621..3761#2796..2909#2641..2712#2433..2537#2291..2358#1916..1970#1665..1821#750..1500#48..341#aaccagaaccctagctcccgccgccgccgccgccgcgctgttccgggatggccggcgccgccgcgctccggcgatccgcgcgccgtgtcgtcctgccaggcgcctacgccttgtcccgggcgctacagcaccctgagcgcctcctctcctcccaggcttcgccggaccgcggcggggtgctgggttcggagcttgggctgtatcccccggagagggtcaggaacttctccatcatcgcgcacgtcgaccacggcaagtccacgctcgccgaccggttgctggagctcaccggcaccatcaagaagggccatggccaacctcagtacctcgacaagttacaggtgtgagaacaaacttgccgttttgaaaaaaatggggacgcgttgagtgagaaattggtagctttgatttgtggtccgtattccataagcttattggataaatgcacataccggaattaatcaattggaagttactccagaatttagttgagttgaacttcgttatgtttggtgaccggtagtaatagcaaagataatccttgtactcactgtgttgacttttgagcatactggatcttaagtgactatttccttaattggcatctcatttcatttgagatgatgacagcactagcataacagatagtgttcattttcagtggatattttcttactgaaattgaaaagaaatatttatactgtgtgcatttgtcataacatttgtatgattgtatctgttctctacaggtagagagagagaggggaatcacagtcaaagcacaaacagcaactatgttctacagacatgctaacaaccaacttcctgcatctgatcagccagatgctccaagctatttgcttaacttgattgatactcctgggcatgtggatttcagctacgaagtatccaggtcgcttgcagcttgtcagggtgctcttttagtagttgatgcagcccaaggtgtccaagcacaaacaattgcaaacttctaccttgcatttgagtcgaatctaagcatcattcctgttattaataagattgatcagcctaccgctgatccagataatgtaaaggctcaactgaagaggttatttgacattgatccaagtgaagctctgctaacttcagctaaaactggtcagggccttagccaggtcttgcctgctgttattgagcggattccttccccacctggaaaatgtgattcacctgtacgcatgcttctcttagattcatactatgatgagtataaaggggtgatatgccatgttgctgttgtggatggtgctctccacaaaggagataagattgcatctgccgcaactggtcgcacatatgaagtccttgatgtgggcattatgcatccagagcttactcctaccggtgtgctttacactggacaagttggatatgtcataagcggaatgcgttcaactaaagaagcacgaattggtgatactcttcatcaagcaaagagtattgtcgaaccacttcctggtatggcatctcctaccctcctgaaatagttttgtcattctattagttttaactagtctgattcagcctgataaaacactgcagttggtacataaaaaaagtctaatgctttgttgctttagttttttttttatgttgtcactatatagagaatatcctttcaggtttcaagcctgctagacacatggtcttctctggtctatacccagctgatggctctgactttgacgctcttagccatgcaattgaaaaactaacatgtaacgatgcgagtgtgtctgttacaaaagagacaagcactgcacttggcatgggcttcaggtatcaacttttttgcatgtgaagtataaatattaaaaaaaattccattgttttatgctatcatgtggagaaacatactgtaattcttctacagatgtggctttctaggattactacacatggatgtatttcatcagcggctagaacaagtatacatcttactgtttgtttttcaaataattgtcaatctatttttgctgacagcaactgactgtgatctttgcatgtactttggtttggcatatctttttttttttacccaacatgtttttcatgttgatttaatactgaaccagagtagtttgcatccaaagaactacatgtcggtcagttgaatcattgatgcatgcttctcttctcagtaaatgatttggaaaacaaggaagatgtgcttgcatcatgtgatgaactgatttctattccctattatatttcttgaggttttaatttattgttgtgccctgttaaggaacatggagctcaagtcatatcgacaataccgacagtgccatatatctttgagtatggtgatggaaggtgcaaaattgcaattattatattatatatacttgttctctgttagttttctaatcatggagtgctttatccagcaaagtgcaagtcgagaaccctgcagctttggcttcaaatcctggaaagcgtatagcagcttgttgggaaccaacagtcattgcaactattattattcctagtgagtaagatctgcttcctttctcatacactcttttagttcatgaatttatacatatttatatttataaaccagaagttcttgagactacccaaccgctttttcaggtatgttgggccagtaattatgctttgttcagagaggaggggcgagcagcaagaatatacattcattgatgcgtaatagtttactccagaaatcattttcttaaaataaattttgttcttgccttacagggctattgtttgtttgtttgatgcagccaaagggctttgttgaagtaccgattaccattgagggaaatcattgtggatttctacaatgaactgaaaagcataacatctggatatgctacttttgattatgaagattctgagtaagtttccttttcaactcggtaaccatacatggtcttgtctaatcttttgattttttttaaacattctgagatggaaaggcatgtatctgttttctttcatcaggtggccttattattcttttctgtttttttgctcctttttgtgatgattattttggaggcctgttttatgccccattcctgaaattcgtactacaccttgctcacaattttctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatattaatgaatctagatagatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtatttacagttcttgtctctactccagcatactaagtactagtagtcacctcactttctttaaaaaaaagcaaagttgtaagcacaaatagaaagctctcttgggagtttaggcatctagtgttttgaccttttgagagtgtttcctgatgaataattattaccaaataatgtgaactataatcacattctggagataatttgcatttcatgcgacttatattatcaaattgcatgtaggtatatttctatggttaaaattaaatgggtgacaaagcaggaaaaaatgccactatggatggctgtttattttcttgtttaactccctttaatttacttcaacaggtaccaacagtctgatcttgttaagatggatattttacttaatggtcagcctgttgatgctatggcaacaatagtccacaaccagaaagctcagagagttggacgagaattagtggataaactcaagaaattcatagaacggtattcatcatgctccttattgtggaaatcctgatgcacagattatgcgcttttataatatttccatatattattagggaacgacaaacataatcgtgattgctgcctacattcttttatcgttgtacagaatgtcaaaaattttcacccatccattaccgccatcctttttcgttatgcttttgtctctgattatgcaggcaaatgtttgagatcactatacaagccgcagttggttcaaaggttatcgcaagggaaacgtaagatagttaaaacctgctgctgtttttttttcccttacaagttaacagcacgattatttttaatggattgtgtttattccctagcttgttgaagttattatttgcatgcacatcactctacagcaagggaattcatagaaaatcacttatctgtccatgagaactgatatttttttctagttgggatgcacttccaactcccaagtaaaattgtgtttgcccattcacatttaccttctaagtagaacaattagatatgctctttggagcttggaacatcctaggtacttggtagtatttggtgtaaagataatcactggagatgtttcctggaaaaaaagcgtttagaaagctaacctttcttagagccgataattttgaatagaactattgtgaacctctattggtctaagcagaactggctgcaaactacaaccatacagccttggtaaatctgttccatgatctgatcttacttggtcatctgtgaaagacctggacataatattccatgcatgactctcagagactcagattatttaccatgcacttagtttcccggtcttaattgtgtctgtaatgtcattcagtttcatggtaaatgttatggtaactataaggttcattccgttcatgtaaaattctgtgcatttgtgtaaatacttaaatatgctatcttgcattgcttccagtctgtcagcaatgagaaagaacgttctggccaagtgctatggtggtgatattactcgcaaaaagaagttgctagagaagcaaaaagaagggaagaagcgcatgaagcgtgtagggtccgttgatattcctcaagaagcatttcatgagctattaaaggtctccaattcaaaatagatgctgtgcttagtgctgtagctgtctaacagcatgagggtgtgttgtggtgaaacacaaacagcatgttctggacttctagtcatcttctgaaaggtgtgtttattacacagttttacacgttatgcccccatgtcccagtgtccagaaaggcctaatttcatgccattttgctctattacaggtgccttttggtctaatgagtacataatgatgtttcttaatgataagaggagacaaagcaccattttgccatcttttgctgtggcaacatattttcatgttgagaagctagcattaccttttgtttttcattgattttcactgtacagaattcggtgatgcctgctgaatcagcagtagcgtcggcttacccttctgattccttaattggcacagccatttagctgaatctcatttctttgttcaaattatgttaagaactttttgggagg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0144800, RefSeq:Os06g0144800