Os06g0146100

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Revision as of 09:03, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0146100| Description = Disease resistance protein family protein| Version = NM_001063326.1 GI:115466383 GeneID:4340110| Length = 8391 bp| ...")
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Gene Name

Os06g0146100

Description

Disease resistance protein family protein

Version

NM_001063326.1 GI:115466383 GeneID:4340110

Length

8391 bp

Definition

Oryza sativa Japonica Group Os06g0146100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2409177..2417567

Sequence Coding Region

2409329..2409444,2412786..2415693,2415788..2415844

Expression

GEO Profiles:Os06g0146100

Genome Context

<gbrowseImage1> name=NC_008399:2409177..2417567 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:2409177..2417567 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggatacggtggtgagcatggcgaggtcactgctcggcggtgccatcgcggcggcttcttccgccgctcgccaggagatgagcatgctgatcggtgtacaaaacgacatctggtacataaaagacgagctcaagactatgcacgcattcctaagggccgccgaggttacaaaagagaaagatgaactggttaaagtatgggcagagcaagtgagggatctagcatatgacattgaagattgccttgaagagtttacaatccatgtgaagcaccaaagcctctcacggcagctgatgaagctccggcatcgccaccgaattgctgtccagattcggagcctcaagctaagggtccaagaagtgagcaatcgaaacatgcggtataattttattaagtctgctccttctagagagatggatgacttttcaaccaacatggaaatgactcgctaccaagctgctcactatgttgatgaagctaagcttgttggatttgatgggcccaaaaaggagatcctgaagatgatatcaggcagtgaagatgtagaagtccagacaatttggatagttggagctggaggtcttggcaagactactcttgcaaagaaggtttatgaaagctcaaatatcacaagcatgttcccatgccgtgcttggatcactgtatcacagtctttcgatgtcatggatttattgaaggacatgatcaagcaactcctaggaaaagagtcactggataatctctttacaaaatataaagaggtgaagataaaggagaacaaccttacggatcacctaaaggaatggctcagaaataaaaggtattttcttgttctagatgacttatggagcacaaaagcatgggattgcctcaaacctactttatggggaaataatagggaaggtagccgacttgtagtaacaacaagaaatagagacctagccgaaggcagttctagcccactagtctacccccttcaaacattacatagagaagatgctaccaaattgttgttggcaaaaaccaacaaaagtttatgtgacataaacaaagatggaatgaatgaaacatttgaaaagatactaaagaaatgtggaggtctaccactagctatcatcacaattggtggacttctagctgccaaagatgtcaaagagtgggatggattatatgcacaaattccatcggaacttgagaacaacccaagctttgaagtaatgaggcaggtgttagccttgagttacaagtacttgccatctcatcttaagccatgctttctatatctaagcatctttcccgaggattttgagatccaaaggaaacgtctagtgtatagatggattgcagaaggttttattagagctagagatggggtaagcattgtggatgttgcgataaaatattttaatgatttaatcaaccgaagtttgatgcaaccatcaagagtgaatatggaaggaactatcaagagctgtcgagtccacgatatcatacgcgatatcatgatatcaatttctagagaagaaaaatttgtgtgccggatagatgataaagaaacttgtctgatggaggaaaacatccaccatgtggccttctacaatagcaatagctcagagatagccatggacttgaaccaagtccggtcattaacagtgtttggtgagagacataaagaactaacacctttgctatgttcaccccaagtaaggatgttaagagtcttggattttcaaggagttagatttggaatgacacaaaaagagatggaccatatatggtcggtgctccacttgaaatatatgaatattcggtgtgactacaatcttcctaactccagtggatattcaaaaatttacagaattccaaggtctatagggaaattacaaggcttacgagttttggacatatcaaatacttgcataacatcactgccaactgagatatgtgaactccggagtctcaatatcctccgttgtacaagaaaagaatactacgagttctttgatccatctaaacctatacaatgtttatttgctttatcgtgcattcctgtaacgatggctttggctgattcagaccagcgtcatgaaataactgctgagctacacatggcttgttctactcgctggtttagtacatgcggtgtgagggtacctatgagaattggaaacttaaaacagcttcaagaactagggtatgtggatatcaggctaactagtagcaaagcagtgaaagagctgggggagcttagccagctaaaaaaattaaggttgcgaataaatggtgccacacaacgaaaatgcaaggtgcttcgtgaagccattgagaagctctcgtcccttcaatctctccgcataaatgctttcgacgtatcttcattgagaaatctcgagtggctacattatatttcctctcctcctccctttttgaagaacctcactttggaaggatgtattaaggagattgactggcttagggagttcacacacctggtgaagattcacttattcggaagcaaactgaaggaaggtaaaacagtacagatactcggggaactgcccaacctcatggtcctgcagcttcggtggggcgcttatgttggggtgaagctattgttccgagcagaagcattcccaaaactcaggaagcttgagattcggtttctagaggacctaagagagatgagatttgaggagcgcacctcgccccaaatggaaacaatagaaatctctcactgcaggttggaatcagggattattgggattaagcatcttccgaagctcaaggagatttcactccgttggaactgtgaagtggcaaggcttggccagctgctagaagaggtgaaagcaaaccccaatcgtcctgttctgctattgtataacgacccatccaagcacgacttaggggacacccaagaagggtcaggtacaccagtggaagcaaatgaacccccgaagaatgtgggcgagagctcgcaatccaaccaaggtgaagatgatgatgacgaccagcaacagcctatcacatcaacagagatcatgcctgcagatgcagaccccgctgtctctagctga</cdnaseq>

Protein Sequence

<aaseq>MGDTVVSMARSLLGGAIAAASSAARQEMSMLIGVQNDIWYIKDE LKTMHAFLRAAEVTKEKDELVKVWAEQVRDLAYDIEDCLEEFTIHVKHQSLSRQLMKL RHRHRIAVQIRSLKLRVQEVSNRNMRYNFIKSAPSREMDDFSTNMEMTRYQAAHYVDE AKLVGFDGPKKEILKMISGSEDVEVQTIWIVGAGGLGKTTLAKKVYESSNITSMFPCR AWITVSQSFDVMDLLKDMIKQLLGKESLDNLFTKYKEVKIKENNLTDHLKEWLRNKRY FLVLDDLWSTKAWDCLKPTLWGNNREGSRLVVTTRNRDLAEGSSSPLVYPLQTLHRED ATKLLLAKTNKSLCDINKDGMNETFEKILKKCGGLPLAIITIGGLLAAKDVKEWDGLY AQIPSELENNPSFEVMRQVLALSYKYLPSHLKPCFLYLSIFPEDFEIQRKRLVYRWIA EGFIRARDGVSIVDVAIKYFNDLINRSLMQPSRVNMEGTIKSCRVHDIIRDIMISISR EEKFVCRIDDKETCLMEENIHHVAFYNSNSSEIAMDLNQVRSLTVFGERHKELTPLLC SPQVRMLRVLDFQGVRFGMTQKEMDHIWSVLHLKYMNIRCDYNLPNSSGYSKIYRIPR SIGKLQGLRVLDISNTCITSLPTEICELRSLNILRCTRKEYYEFFDPSKPIQCLFALS CIPVTMALADSDQRHEITAELHMACSTRWFSTCGVRVPMRIGNLKQLQELGYVDIRLT SSKAVKELGELSQLKKLRLRINGATQRKCKVLREAIEKLSSLQSLRINAFDVSSLRNL EWLHYISSPPPFLKNLTLEGCIKEIDWLREFTHLVKIHLFGSKLKEGKTVQILGELPN LMVLQLRWGAYVGVKLLFRAEAFPKLRKLEIRFLEDLREMRFEERTSPQMETIEISHC RLESGIIGIKHLPKLKEISLRWNCEVARLGQLLEEVKANPNRPVLLLYNDPSKHDLGD TQEGSGTPVEANEPPKNVGESSQSNQGEDDDDDQQQPITSTEIMPADADPAVSS</aaseq>

Gene Sequence

<dnaseqindica>153..268#3610..6517#6612..6668#gtgttgctcactgcaagccctagttaagcatttcttaccacagaaagcgctggcagatcgaactagctagtcctctctccgatccactcgtcaggatcgtcaggctaattcttttgtgcgcagtgagcgagtggcgccagacgaatccagcgatgggggatacggtggtgagcatggcgaggtcactgctcggcggtgccatcgcggcggcttcttccgccgctcgccaggagatgagcatgctgatcggtgtacaaaacgacatctggtacacacactcatctctactactacctccgtccatcaatgtggatctgaattgtttgctatagactgcttgcaacacacagctaataaagtagagtcagttaactagttgctacaaacatatcaaaaagagcaaattaattatattagagctaaaatatataataagttagctataacgttatctatgtttttttttctattatcccttttttatctcacctatgtgttataatgtatctctcttggtccaatctaccattatatttgctcgatctaaggttgcaaggcaatatgaagtgcgtgcagcagtgcctccatgcatctattgtgctaaatcagtctaaagtagattcccctgcttcatacgataggaacttaggaagcaggcagtccaagggatcgataataatgaaactatacctaattaaggacgtaactacactgctagtgatagcgggttaccactccatctataagaggcaccatccatctatactaatacaattttttcttaaactactcatccgatctacgatccaattataccgttgtgttcgtaacaattaaatctttacaacaaaatatcacatgattatattttgatgaaaaatcacaaattacttttatgatatgtctaaattacttttaaatttcactaagttacttcttagatatataaaagtaaattcagtaaagcctaaaagtaatttacatatattatagaagtaacttagaacaaaacgaaggtaactttggcataccatttgaagtaaatccgttgtagagataaaaaaatgactctatctaaaaattaaattaatcaacacaaattatggaattaacttaaaaaataataaaagtaatcacctcagagtattatgaatatataggaagtattttaatccaatctaaaagtaacttttaaacaaataaataaataaataaataaataaataaataaatatttatttatttatttaaaagttacttttagattttatatatatatatatatataatatgataatttgttcaatgaaaaaaggcattaattaaagttactttctttttgttataagttacttctataatatatgtaaattacttttaggctttactgaatttacttttatatgtctaagaagtaacctagtgaaatctaaaagtaatttagacatatcataaaagtaatttgtgatttttcatcaaaatataatcatgtgagatcttgttgtaaagatttaattattacgaacacaacggtgtaatttgtaaatcggatgagtaatttaagagaaaattttatttgaagcatagatgatatgaatatttcccctacttgctcaatggattaatagcaaccaaaacttctaaagtactagcacgtgggtgtctctggttaagactaattggagaggcctctccagttagatttaccgcctaattaaatgatactatatacaattaagggtattgctagattttaggcttttagcttcctgaagatttataaatttcagttacctaaattgaatattcctaagtctaagcgtaagcaatgtgcaattttacttctttttttactacaattttgttgtttatatatggatttactttatttttatcttaagtttgaaaaaaaaaatttcatgtaatttagtttatttcttgtaaagttgtaattttgtatgttcaaatatatggtttaaccttttataaggaaaaaatggaggggcattaagaaccactagattacctgacatctagacactccctataattaaatgctactccctctatttcaggttataagatattttaactttggtcaaagtaaaactcactagtacaaaaaagctcataaagatcggcactataggtgccggaacaactaaaatcggcacctataatgcttttcccttttccgtgggctgaaaacacataaaaccataagcaactataggtgtcggttctaaagaagaaccggcacctatagtataggtatcggtttttctttagaaaacccgacaccttttaatataatataggtgccagttttctaaagaaaaactgacacctgacacctatactacaccaataataaattataggtgtcggtttttttttaaaaaaaacggcacctatccaagcttttttttttgcggggggcacctatccaagctaccgagtcgagccaagccaagccgaccaaggccaaccattagccttatcctatatgagaaccttatcgcctcgtcttctctcgttctctctcgcccctctctcttgcttctcgcctctctgtgtcgcgcgcggcggcggcggcgcacctcgacgacgagcggcgcgcgacagcggaggcggcaccctcccctccgccgaatctggcgggaggggaggcggcgggcggcggcaaaagtggggctcgccggcgacaaagccgatggtggagcatgaagtgggctctcctccctcgtttcttgtagatttattttagatgttttggtagatttgtggatgatttttttagatgttttggtagatttatggattggagtatgttcatactgtgatgtcaattgattttgatggcaatttgtggatgatttggggatttgggaattttggtgctgatttgtggatgatttggagatttggggattttaatttgatttgggagcaactcgggcgatgacacagtgacggtgctcagtgagctcggcttgatttgagccgagctggtccttttttttttttggctcgagcaaagctaaaggtgccggttttattttcttcataggtgccggttgctagtattagtgccgaccaataggtgtcggttaggaaaccgacacctataaccggttgggaaccagcacctatggtcatttctgtagtagtgactgcttcaagtttgattaagtttatagacaaatataataatatttatattaccaaattagtttttatcaaattaatgattaaatatatttttataataaatttatcttggttcaaaaatattactatttttttatataaacttggtcaaaattgaagcagtttgactttgactaaagtcaaaacatcttataacctgaagcagagggagtagatatttgtttttctagaagttatggccatttatctgattttttagcgtatctaaaaatctttcacctatctttaatactgataatagatagattttcacgagcgtcaagcttttgtagtatcagtttcacttggcataagatttttcgtactgcactccatgtgtggttacaataattagcagctgatttggaataagatattctttgaactcatggctgccaggtacataaaagacgagctcaagactatgcacgcattcctaagggccgccgaggttacaaaagagaaagatgaactggttaaagtatgggcagagcaagtgagggatctagcatatgacattgaagattgccttgaagagtttacaatccatgtgaagcaccaaagcctctcacggcagctgatgaagctccggcatcgccaccgaattgctgtccagattcggagcctcaagctaagggtccaagaagtgagcaatcgaaacatgcggtataattttattaagtctgctccttctagagagatggatgacttttcaaccaacatggaaatgactcgctaccaagctgctcactatgttgatgaagctaagcttgttggatttgatgggcccaaaaaggagatcctgaagatgatatcaggcagtgaagatgtagaagtccagacaatttggatagttggagctggaggtcttggcaagactactcttgcaaagaaggtttatgaaagctcaaatatcacaagcatgttcccatgccgtgcttggatcactgtatcacagtctttcgatgtcatggatttattgaaggacatgatcaagcaactcctaggaaaagagtcactggataatctctttacaaaatataaagaggtgaagataaaggagaacaaccttacggatcacctaaaggaatggctcagaaataaaaggtattttcttgttctagatgacttatggagcacaaaagcatgggattgcctcaaacctactttatggggaaataatagggaaggtagccgacttgtagtaacaacaagaaatagagacctagccgaaggcagttctagcccactagtctacccccttcaaacattacatagagaagatgctaccaaattgttgttggcaaaaaccaacaaaagtttatgtgacataaacaaagatggaatgaatgaaacatttgaaaagatactaaagaaatgtggaggtctaccactagctatcatcacaattggtggacttctagctgccaaagatgtcaaagagtgggatggattatatgcacaaattccatcggaacttgagaacaacccaagctttgaagtaatgaggcaggtgttagccttgagttacaagtacttgccatctcatcttaagccatgctttctatatctaagcatctttcccgaggattttgagatccaaaggaaacgtctagtgtatagatggattgcagaaggttttattagagctagagatggggtaagcattgtggatgttgcgataaaatattttaatgatttaatcaaccgaagtttgatgcaaccatcaagagtgaatatggaaggaactatcaagagctgtcgagtccacgatatcatacgcgatatcatgatatcaatttctagagaagaaaaatttgtgtgccggatagatgataaagaaacttgtctgatggaggaaaacatccaccatgtggccttctacaatagcaatagctcagagatagccatggacttgaaccaagtccggtcattaacagtgtttggtgagagacataaagaactaacacctttgctatgttcaccccaagtaaggatgttaagagtcttggattttcaaggagttagatttggaatgacacaaaaagagatggaccatatatggtcggtgctccacttgaaatatatgaatattcggtgtgactacaatcttcctaactccagtggatattcaaaaatttacagaattccaaggtctatagggaaattacaaggcttacgagttttggacatatcaaatacttgcataacatcactgccaactgagatatgtgaactccggagtctcaatatcctccgttgtacaagaaaagaatactacgagttctttgatccatctaaacctatacaatgtttatttgctttatcgtgcattcctgtaacgatggctttggctgattcagaccagcgtcatgaaataactgctgagctacacatggcttgttctactcgctggtttagtacatgcggtgtgagggtacctatgagaattggaaacttaaaacagcttcaagaactagggtatgtggatatcaggctaactagtagcaaagcagtgaaagagctgggggagcttagccagctaaaaaaattaaggttgcgaataaatggtgccacacaacgaaaatgcaaggtgcttcgtgaagccattgagaagctctcgtcccttcaatctctccgcataaatgctttcgacgtatcttcattgagaaatctcgagtggctacattatatttcctctcctcctccctttttgaagaacctcactttggaaggatgtattaaggagattgactggcttagggagttcacacacctggtgaagattcacttattcggaagcaaactgaaggaaggtaaaacagtacagatactcggggaactgcccaacctcatggtcctgcagcttcggtggggcgcttatgttggggtgaagctattgttccgagcagaagcattcccaaaactcaggaagcttgagattcggtttctagaggacctaagagagatgagatttgaggagcgcacctcgccccaaatggaaacaatagaaatctctcactgcaggttggaatcagggattattgggattaagcatcttccgaagctcaaggagatttcactccgttggaactgtgaagtggcaaggcttggccagctgctagaagaggtgaaagcaaaccccaatcgtcctgttctgctattgtataacgacccatccaagcacgacttaggggacacccaagaagggtcaggtacaccagtggaagcaaatgaacccccgaagaatgtgggcgagagctcgcaatccaaccaaggtgaagatgatgatgacgaccagcaacaggttagtactgcatgggatgtgctacttgtttttctcctctgttgtgtgagcttttttttttcctatactcacaattcctctatcttgtttgtagcctatcacatcaacagagatcatgcctgcagatgcagaccccgctgtctctagctgattaacctctccttcgtgatgattaacactacaatcacagcaatggtgatcaaatctagcgagtggccagctcgagttctgtattgcttgttgtctccccctgcctggtgtacccaaggcttaggtcactgtctcttctctcaccatgccggtatgcctgtttcaacctgattcctgataatagctgcacttttgtgtgttatcgatttgctaaaacacataccttattgttgtttgttgtgcctgaaaaccatgcctttttgtactctccagcttgtgtggagtttgagtacaacggcgcacagcctgattggtttctgaacctcaccctgttgctgatgatttgctttctgagagccagcagcaatacaaaggtaaaactattcaagtgcttgttggctctgcccactcatggcccttcattatttcaggcttgttcactttgttgccactttcaaccctattaaattttggcattactaattttagtatggtaacaaacgaaatatatccttaccatttgtactctaccaaatttttgtaatttcggaagttttcgctctcaaacactttactaatatttggtagactttaaactaaagacgttacacatccaacactaccaagctttgataacgctaaaaatgtgctaaaagttaccattgcagagggttgaaaatgcaacaaagtgaataagcctcttcaatgtatatatattcgcgggggaaactagcattcaaaacaggactttttttttgaaaggagggcaaaagcattcaaaacaagagtattttcaattaccaggatctcgatatcgatgcgctggagaagtgcactttcagtagggcacctccaggtgaatgaacatcccatccattgtgtgctgtcagcagaaagaccgaagcaagcacaattgcatgggctgcaagtgatctggacactgaattaacactggaagcagcacgcagtcccttgctgagctagtagagagctaatgacacacttgaagaccaatgcttgtctctgaattatgaagaatgaagtgatcttattgataacaggtcagttcttctcagtaatagctctcatctgcagttatcattcagatgcttcgttcttacgattcccaatatcattttcagcttgtgatcgcaaatatttgggcccgtattcatctcaagggctagtcgcacagccccaagtgcagcattgcaagtacttttcttgttgcaagcgaggactacctcacccgagtttgcgtcctctgtgaccaacaagaagaaacaatcgatcacatcctaattataatttgctgtccggaagcacttcaactttggtggatcatcctcattgcagttggccaacttcgttgttttcacaatccttcttcatcctatggtggtgtgacaacgggaatgatcgtcatcctaatagcctagtctattttgaaggaaagaaacaacagtgttttcaacaatataagagcaaatcctgggcagaagtggctgccgctgctgcagcagaactgaagaagcagcagtaagagggtcatgtcctagtcgcatattcatcccgcgagaattagcctatccttttgcctagccttttttgttccttttatttctttatatttacatatttcttgttgtttgtgcgctgatgtacatcacttccaaatttggtgtcattcttgtttacatagtcgcaaattcgtactactgttt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0146100, RefSeq:Os06g0146100