Os06g0149700

From RiceWiki
Revision as of 09:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0149700| Description = Cysteine synthase (EC 4.2.99.8)| Version = NM_001063354.1 GI:115466439 GeneID:4340140| Length = 2498 bp| Definition...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0149700

Description

Cysteine synthase (EC 4.2.99.8)

Version

NM_001063354.1 GI:115466439 GeneID:4340140

Length

2498 bp

Definition

Oryza sativa Japonica Group Os06g0149700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2573180..2575677

Sequence Coding Region

2573250..2573333,2573518..2573645,2573778..2573980,2574138..2574263,2574531..2574689
,2574866..2575059,2575260..2575385

Expression

GEO Profiles:Os06g0149700

Genome Context

<gbrowseImage1> name=NC_008399:2573180..2575677 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:2573180..2575677 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggaaggaggcaggagagggatcccttctctgctaaattcatcgtcatcagatgaacatatcgccactgatatcactcagcttgtaggatggacgccactgatagagctgaaccggatcgtccgaaaagacggggtaaatgcccggattgttggcaaattggagtcataccaacccctctgctctgtcaaggatcgcagtgctctgagaatgattgaggatgcagaggagaaaggtctgatctcaccaggcgttacgacgctagtcgagccgacaagtggtaatcttggaataggtgtggcatacaatgctctgctcaaaggttacaggttcgttgcagtcatgcctgctgagtattcacttgataagcaaatgttgttgacgtatctaggggccgaggttattttaactgatcctacacttggttttcagggacaattagacaaagttgaacagatcaagaatgatatgcctaacgtacatcatcttgatcagtttaaaaatgcagcaaatcctgaagcacactttgtatggacagggcctgagatttggaaggatacggcaggcaaagtagatatctttgtggctggttctggcacaggaggaacaatttcaggtgtagggaaatatttgaagatgaaaaacccagcagttaaagtaatttgtgttgagcctgcggaaagccctgtaatttcaggtggtaagccttcgcggcataaaattcagggaatgggtccaggctttgtaccaaaaaacctggatatctcaatcgtcgatgagatcatcacagtaactgcacaagatgcaatggctaatgcaaagaggctggcaagagaagagggtttacttgtgggcatatcatccggagctaatttggcagcttgtctgaaggtggcatcgaggaaagaatatgagggaaagatgattgtaaccattttccctagtggtggtgaaagatacatgaactctgacctctttgcacaagcaagggaggagtgcagcgccatgaccttttga</cdnaseq>

Protein Sequence

<aaseq>MEEGGRRGIPSLLNSSSSDEHIATDITQLVGWTPLIELNRIVRK DGVNARIVGKLESYQPLCSVKDRSALRMIEDAEEKGLISPGVTTLVEPTSGNLGIGVA YNALLKGYRFVAVMPAEYSLDKQMLLTYLGAEVILTDPTLGFQGQLDKVEQIKNDMPN VHHLDQFKNAANPEAHFVWTGPEIWKDTAGKVDIFVAGSGTGGTISGVGKYLKMKNPA VKVICVEPAESPVISGGKPSRHKIQGMGPGFVPKNLDISIVDEIITVTAQDAMANAKR LAREEGLLVGISSGANLAACLKVASRKEYEGKMIVTIFPSGGERYMNSDLFAQAREEC SAMTF</aaseq>

Gene Sequence

<dnaseqindica>71..154#339..466#599..801#959..1084#1352..1510#1687..1880#2081..2206#gtggatccagctgatggaaatatatatactgagatagttctctgctccttgctccgagcaagtgaacagcatggaggaaggaggcaggagagggatcccttctctgctaaattcatcgtcatcagatgaacatatcgccactgatatcactcaggtgagctgatccctatcctctactgcactatcttctttctgatcttctccatcttcagttcttgctttttggggggtgaaattggttttggtctgaacatatatgtgtcagacagaattcatgctggtggtgtgaactgtgaagtttgaaggattagtacaactcaggttcattcttccttcagcttgtaggatggacgccactgatagagctgaaccggatcgtccgaaaagacggggtaaatgcccggattgttggcaaattggagtcataccaacccctctgctctgtcaaggatcgcagtgctctgaggtactgacaaatatgtacccatatgctatccattgttcaatgtttcaatatctctgctgatcacattgttaagttaggctatttcatgatcattttgatcaatggctcatactctgtaataccaattttcagaatgattgaggatgcagaggagaaaggtctgatctcaccaggcgttacgacgctagtcgagccgacaagtggtaatcttggaataggtgtggcatacaatgctctgctcaaaggttacaggttcgttgcagtcatgcctgctgagtattcacttgataagcaaatgttgttgacgtatctaggggccgaggttattttaactggtaaggatgtaaagcacaaatctttggtaattactataagtttttaactgttgaaatcattctcaaaatttgatatcggcatttggtgtcctgtcatttgtcaattgtggggaccacaagatactgaactctctaattcaatgcaatactgtttcagatcctacacttggttttcagggacaattagacaaagttgaacagatcaagaatgatatgcctaacgtacatcatcttgatcagtttaaaaatgcagcaaatcctgaagcacactttgtatggacaggtacctattcttacacaatgtaatgtaatgtaatctactagtaaaagagtactataaatagtagcaagccatatattttatttgcaatgatcattaactgtagaggattatactgtcctggattcaaaacaaaagggcctttgtccgtcataattcatatgatgaaattcatgaattgggtgggcttaatattcctgttatccatatcatgatttacgagtcagatagtgtgatcatattcaaatgttgcctatcctttccttctagggcctgagatttggaaggatacggcaggcaaagtagatatctttgtggctggttctggcacaggaggaacaatttcaggtgtagggaaatatttgaagatgaaaaacccagcagttaaagtaatttgtgttgagcctgcggaaagccctgtaatttcaggtaagtctctacaatatcacaagtatcacactgaacatgtcaaagaaaaagtatcacctccaatgataaaatgtttcgacaaacaaaaaaaaaaatcttttgagaaatgaattgcctcggatatctaaaattgtgtcctgttggcttctacaataattttcctcacattgttttaggtggtaagccttcgcggcataaaattcagggaatgggtccaggctttgtaccaaaaaacctggatatctcaatcgtcgatgagatcatcacagtaactgcacaagatgcaatggctaatgcaaagaggctggcaagagaagagggtttacttgtgggcatatcatccggagctaatttggcagcttgtctgaaggttccaactgaactaattttcttgtgggcatatcaactttcgtttgttctgattatagcttcccagcattataatcttgtattttcttccgctatatcgatagaaacttcaggccatttggtgctgttcgtttgaaaaaaaaaactttcttgcattcttttttcatgtaatctttgcttatctttgtaaggattttttaggtggcatcgaggaaagaatatgagggaaagatgattgtaaccattttccctagtggtggtgaaagatacatgaactctgacctctttgcacaagcaagggaggagtgcagcgccatgaccttttgatctcatggctttttcagttctattctactctgtatggaagccaaggtaggattttagcataaatatataagtacagttaagaactaaaattcaaggtaaaaatacattggtcacttatctaatccgcttattggatttggactcgttacatgttgatgcaggtggcttgtacactgatcagtgagcagagtgtgggggaaaataaagaaaagccggatgtgttgtacttgtttgttgtatgaaaatatgaaataagaggacaagccatttattattttttgtaaagaagact</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0149700, RefSeq:Os06g0149700