Os06g0150400

From RiceWiki
Revision as of 09:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0150400| Description = Conserved hypothetical protein| Version = NM_001063358.1 GI:115466447 GeneID:4340145| Length = 3190 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0150400

Description

Conserved hypothetical protein

Version

NM_001063358.1 GI:115466447 GeneID:4340145

Length

3190 bp

Definition

Oryza sativa Japonica Group Os06g0150400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2588060..2591249

Sequence Coding Region

2588365..2588541,2588621..2588746,2588820..2588897,2589593..2589724,2590040..2590108
,2590777..2590887,2590973..2591200

Expression

GEO Profiles:Os06g0150400

Genome Context

<gbrowseImage1> name=NC_008399:2588060..2591249 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:2588060..2591249 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagaggcggcggcgtcgcggtggccatggccgtcgcggtggcggcggttgtcctcctgctccaccctgccgcttctgcggcggcggcggggccgaagaaggtggcgacggccgcgaggaaggaggacatcccctacatccggtgccaggtctgcgagcggatcgcgcgggagatctcggcgcaggtggcgaagaagcagcaggcgctcccggcaacgaagaaggtgccggagatcgagatcatcgagatcgcggagaatgtgtgcaacctgaagaagcaggaggcagactggatgctcaagatcgatatcgtagagaaaggcgataagctcgagctcgttgagcaagatgaggaagggcactgtaatgcagaatgcaaaaccattgagcgtgcatgtcaggaggtgatggggtatgctgataccgatgttgctgaattcgtctacaagaaaaaaccttcagctgatcagctggtcaaatttctttgcaaagatctttctgaagcatgcgttgtggatccaccaccagttccaaaagatcgggtccctggcgaaccttttgctgctaagccatcaaaagatgctgagatggataggatattgaaatcgatggagggtattccaggagctccaagcatgaaaatgtactctagagatgatctgatgaagaacaattttggtgttgacggtgatgatgacgatgatgatgaagatgaggacgatgacttcccaaagaacttgggaaaagttttcaaagataagggttcaccaaagaaagatttgaaacaacaagttgtgaagcagatcaaggatacaggcaaaaagttaaaaggccatgtgaacaaggtgtcaaaggtggtaaagaaatggtggcaagggaagaagaaaccttcaaaatccagcaaaactgaactctaa</cdnaseq>

Protein Sequence

<aaseq>MARGGGVAVAMAVAVAAVVLLLHPAASAAAAGPKKVATAARKED IPYIRCQVCERIAREISAQVAKKQQALPATKKVPEIEIIEIAENVCNLKKQEADWMLK IDIVEKGDKLELVEQDEEGHCNAECKTIERACQEVMGYADTDVAEFVYKKKPSADQLV KFLCKDLSEACVVDPPPVPKDRVPGEPFAAKPSKDAEMDRILKSMEGIPGAPSMKMYS RDDLMKNNFGVDGDDDDDDEDEDDDFPKNLGKVFKDKGSPKKDLKQQVVKQIKDTGKK LKGHVNKVSKVVKKWWQGKKKPSKSSKTEL</aaseq>

Gene Sequence

<dnaseqindica>2709..2885#2504..2629#2353..2430#1526..1657#1142..1210#363..473#50..277#agagtgagacgaagggaagaaaaaaaaaaaaactaaaatctcatcggagatggcgagaggcggcggcgtcgcggtggccatggccgtcgcggtggcggcggttgtcctcctgctccaccctgccgcttctgcggcggcggcggggccgaagaaggtggcgacggccgcgaggaaggaggacatcccctacatccggtgccaggtctgcgagcggatcgcgcgggagatctcggcgcaggtggcgaagaagcagcaggcgctcccggcaacgaagaaggtactgaattttcgtttcgggttcggtgaattttgcggtgattgtggtggtttgtgttgatgggttgaggtgggagtgtgcgtaggtgccggagatcgagatcatcgagatcgcggagaatgtgtgcaacctgaagaagcaggaggcagactggatgctcaagatcgatatcgtagagaaaggcgataagctcgaggtgattcggttgccatcctctgtttttaagttgatgttagtgtagatgtgtgtgggttggtgcttgctaaatctgcaaactatactgatctgcttgtctctggtcactggagagaaaattgctccttcatgtatgtatatgttcatgaaacccatgcactaaaaagctatgaaatctgcttcaacaccactagatacaaagccaaagctttactcatacactgaccctggttaaaatatgttcactgtcaccaatcacaaacaataattctacccgaacacatgattgaaacgtaagtgttatgacctggcccaaaaacaatttatgtagttgaatttatgatgtgaattcttgtttatgtaaggcttcataatttttatctttattcacatagtacacacataactatacaagtatttagccttcttgattttccacttagaaacgccgccgaaagtgaaaactctactaaaactttcttctgaacacagtacatcttcaaattatcaatagatatacttgttagtccaatccaggttcatatgaattacctgtaaaccttttaaagaaaatctctatctaaatctgtttgatcttggctgtggttaatttgttatactcacttgtttgtattatttcccaatctaatctatagaagctttttacagctcgttgagcaagatgaggaagggcactgtaatgcagaatgcaaaaccattgagcgtgcatgtcaggaggtgaagatcaatgcttatctgattggtgtttctttattgttgttaaacactattacacacatgtttcacaaatcacaagaccatatcttgacatactaatcttgcatgattaatacattaatgacttactgactaaataagatttatgttaatgaatcagttcgaatggattgcaaggagtttaatcatgttaatattgcataggatctgcataagatttatttgcagatcatagtaacttttaaacatatgtgcaccacttttagttgtattgaattttgtgaatcttagcaaaccaaactaaatccattgcaggtgatggggtatgctgataccgatgttgctgaattcgtctacaagaaaaaaccttcagctgatcagctggtcaaatttctttgcaaagatctttctgaagcatgcgttgtggatccaccaccagttccaaaagtgaggatattttcatcttagtttcccttttatgcagatattatctatgaacatcgctagttgtagtgttgtaaagatgatcaattggggtattgaaatactaggaggctttatcactggtagagtggcagttatgtatatagattagcagcactagaaaaagaactccaatatttattcggacactttgtatcagtgttcgcatcgacatttaactagtcaacaatatttgagctattgctatcttgtatgaagcaagatgcaggtgtatttctggcatattagcattagcctacctattttttccagcccataagtttcatattggtagaaattggctgttctaatttaataacagttcacttacgatggataaaagcgtagaaatcctgtgattctattctttacttaattacattggttgcctcatactctatactactgacttagtttttcccgattataagtgcatcgattcatatggttgactatgagaaaccattaaagccttactagaaggggaagaatagcagtagattcaatataggaattaatatttacttgtcacatcatttaaaattgataatttaatttgtgtgcttcattgccacaaaagaggtatgccatatgtgaagcttggaacatcactattgaaccatcatattcctgacatacatccattgcaaaaactgcaggatcgggtccctggcgaaccttttgctgctaagccatcaaaagatgctgagatggataggatattgaaatcgatggaggtaaacattctagcagtaaattctatagcttcatccaagtagattcaatttcatgagttcccgtcgatgacagggtattccaggagctccaagcatgaaaatgtactctagagatgatctgatgaagaacaattttggtgttgacggtgatgatgacgatgatgatgaagatgaggacgatgacttcccaaagaacttggtaatattttgcacctttctatctaagatacttttattttgattctaacatttaatcatacatctcacattccttccagggaaaagttttcaaagataagggttcaccaaagaaagatttgaaacaacaagttgtgaagcagatcaaggatacaggcaaaaagttaaaaggccatgtgaacaaggtgtcaaaggtggtaaagaaatggtggcaagggaagaagaaaccttcaaaatccagcaaaactgaactctaaataccacggaatttccagtccaattttgcattctcctggagatagattgattgtcggaaggttagcgtgccccccagcaaaacatccacagctttcatagatgatcagaacataaacgtgtacaatttttttccagaaattttcagtgtacacctaaactaggaaggtaactggacgagttcggcatgaatattcatgagtcatagtttgcaagtttaggaaaaacaccaattgattgttgctatgccatactctgtaaaacaacggccataccagtaaattagatgattggctgtctgaagttc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0150400, RefSeq:Os06g0150400