Os06g0153200

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Revision as of 09:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0153200| Description = Protein of unknown function DUF250 domain containing protein| Version = NM_001063375.1 GI:115466481 GeneID:4340163| ...")
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Gene Name

Os06g0153200

Description

Protein of unknown function DUF250 domain containing protein

Version

NM_001063375.1 GI:115466481 GeneID:4340163

Length

5528 bp

Definition

Oryza sativa Japonica Group Os06g0153200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2742657..2748184

Sequence Coding Region

2742843..2743265,2743362..2743539,2743613..2743698,2743815..2743864,2744070..2744137
,2744976..2745076,2745197..2745209,2745742..2745926,2746003..2746089
,2746645..2746739,2747154..2747283

Expression

GEO Profiles:Os06g0153200

Genome Context

<gbrowseImage1> name=NC_008399:2742657..2748184 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:2742657..2748184 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gttgccagccacagccaggtaggtaggtgggtgcgcgcgcgcgcgccgcgggcggagccgccgaggaggaggagagagatcgctttggcgcgcgccgtggtggtggagggatatgcattccaagcccgagggggacgcggcgtcggcggcggcggcggcggagggtgggtccccgcgatccggctacttccggcagcggagcatgtacgccgcggatccggacggggtcggcgccgccaccccacgcaaggcgttcgacgtggagaaccctcccggcggcgccggggggctccgcccgagcgagtccgtcaccaagctggagtcgctggagcgtgcggagcgcgccgcgctggcgcccgcggtggtgctcaagacgggcttctacatcctcgtctggtacgccttcagtacctgcctcacgctatacaacaagacgctgcttggcgacaagctgggcaagttcccggcgccgctgctgatgaacaccgtgcacttcgcgctgcaggcggggctctccaagatcataatgctgttccagaccaaaggggtggagaacgcggtggagatgggatggaaggattacttcatgagaggtttgtattcgtgccaactgctctgggaacagcattggacatcaacctgagcaatgcgtctctagtgtttatctcggtgacatttgctaccatgtgtaaatcagcctccccgatatttcttttgatgtttgcttttgcatttaggttggagagtcccagcatcaagcttctaggaataattgtagttatctctactggggttctcttgacagtttcaaaggagactgagtttgacttctggggattcatttttgtgacacttgccgctgttatgtcaggatttcgctggtccatgactcagatactgttgcaaaaagattcttatggtctaaaaaatccaatcaccctgatgagtcatgtaaccccagtgatggccatagccaccatggtactctctctcttaatggatccttggagcgattttcagaagaacacatattttgatagcccgtggcatgtcatgcgcagttttttacttatgcttgttggaggaaccttggcctttttcatggtgttaacagagtatgtacttgtttcagcaaccagtgctataactgtgacaatagctggggtagtaaaagaagctgtaaccatcttggtcgcagtattttatttccatgatgagttcacttggttgaaagggcttggtctcgccaccatcatggttggagttagcttattcaattggtacaagtatgagaaatacaaaaagggtcacataaatgaggatgaagttaattcaccttcattcgatggagatgccaaatacatcattctagatgacttggaggaccaggatgagtttcaggatgaagatacataa</cdnaseq>

Protein Sequence

<aaseq>VASHSQVGRWVRARAPRAEPPRRRREIALARAVVVEGYAFQARG GRGVGGGGGGGWVPAIRLLPAAEHVRRGSGRGRRRHPTQGVRRGEPSRRRRGAPPERV RHQAGVAGACGARRAGARGGAQDGLLHPRLVRLQYLPHAIQQDAAWRQAGQVPGAAAD EHRALRAAGGALQDHNAVPDQRGGERGGDGMEGLLHERFVFVPTALGTALDINLSNAS LVFISVTFATMCKSASPIFLLMFAFAFRLESPSIKLLGIIVVISTGVLLTVSKETEFD FWGFIFVTLAAVMSGFRWSMTQILLQKDSYGLKNPITLMSHVTPVMAIATMVLSLLMD PWSDFQKNTYFDSPWHVMRSFLLMLVGGTLAFFMVLTEYVLVSATSAITVTIAGVVKE AVTILVAVFYFHDEFTWLKGLGLATIMVGVSLFNWYKYEKYKKGHINEDEVNSPSFDG DAKYIILDDLEDQDEFQDEDT</aaseq>

Gene Sequence

<dnaseqindica>187..609#706..883#957..1042#1159..1208#1414..1481#2320..2420#2541..2553#3086..3270#3347..3433#3989..4083#4498..4627#acacccgccaaatccaccaccgtctccctcctcgcctcgtcccccggcaggcaaggtcggcacgcaccggccacccacccccattcccagatcccccggcgccgccgcggccgcgccattcgccgattgcgtcggcgtcggcattccgtgtcgcgcgccgcaatgccggcgtcgtcgtccttgtaggttgccagccacagccaggtaggtaggtgggtgcgcgcgcgcgcgccgcgggcggagccgccgaggaggaggagagagatcgctttggcgcgcgccgtggtggtggagggatatgcattccaagcccgagggggacgcggcgtcggcggcggcggcggcggagggtgggtccccgcgatccggctacttccggcagcggagcatgtacgccgcggatccggacggggtcggcgccgccaccccacgcaaggcgttcgacgtggagaaccctcccggcggcgccggggggctccgcccgagcgagtccgtcaccaagctggagtcgctggagcgtgcggagcgcgccgcgctggcgcccgcggtggtgctcaagacgggcttctacatcctcgtctggtacgccttcagtacctgcctcacgctgtgagtatactcctcctcctattcttctttctcctcagatgtgatgtgagccagcaacaatggcggtttgatttggttggttgcttgctggggtagatacaacaagacgctgcttggcgacaagctgggcaagttcccggcgccgctgctgatgaacaccgtgcacttcgcgctgcaggcggggctctccaagatcataatgctgttccagaccaaaggggtggagaacgcggtggagatgggatggaaggattacttcatgagaggtttgtatgtatgttggattcctcagagttgaagatcattttgtttggccgtttagtcttactttctttgcatttcttcagtcgtgccaactgctctgggaacagcattggacatcaacctgagcaatgcgtctctagtgtttatctcggtgacatttgctaccatggtatctacttatccacagaaatgcttcattattcttgctattaatcaggttcctctcagttcatttggctgaaaaattaactagattttttttaaaaaaaaattgactctttgcagtgtaaatcagcctccccgatatttcttttgatgtttgcttttgcatttaggtgagtgctaactaccacgaaatttgttattacctctgtagtatggctttcctgtacaaatgcttactcagttgattttatctgtgatggttattgggggtaattgattattattctatcaaattgataagatttgttcctcggtctttcgatgtcctttgttttttatagtatattcttctaaatattccttctgttttacaaggttggagagtcccagcatcaagcttctaggaataattgtagttatctctactggggttctcttgacaggttcgtacactcggagggcttagaatgcatgcagagagactattgctgagtattgaattttgtgctgctgctaagtatgctggtagctactagcttatttattaagatagtagtattgctttatcttttttgtgacttgctcttctatgtcattattagattgtattttaccagcacaggttgaaacatgatctgtaggtaacaaacaaaagttagctgttcggaaggtggtattatgatagactaagtactacctgtcttaattgtcattcttgacttgtttgataaatgaagaaaaagctgagctttctcattatgcagtataagtctattgccttgcaaaattccaatgctggagaatacatcatttcgtaaattaggggcgggtgttggtttaaaggttttatcagttcaaattatcctttttaacttgtttttgggataatggctactgaatttaacatagtgtagacgccatacctgataaggtaaaacatgtctgtggtgtttaccacaatttggatatcagtgactcttttggttgtgttgagatggttatctcctatttggccagcattgtttctctaggcatgtttagatcaactactgagctgaagaagttggcgagacgaaatgctgttaaatatatattctgcttcacatagaggttgaattgacgggtgtgcaacaaactgtaacttgtactccagtagagtgtttctcttatataaggcactatattgttacactcttccgttgtgcaatcctttttagtgtaataacgtaatgtaccttttggagttatcttttatgatctaatgatgtgtttttttatcagtttcaaaggagactgagtttgacttctggggattcatttttgtgacacttgccgctgttatgtcaggatttcgctggtccatgactcagatactgttgcaagtaagtgtcctaactaaagttatccaaatgtttttgaatcacatgtttctcttgttcctcaatgctcctcgtgctaatgtttagctttgtttttctgcatgtggatcttgatatttcaagaaagattcttatggtatgttacctacttagctgagcttaatgctttatctttgaaaacttattccaacaataagagaggaacccacaagggcaccttaatacttctaatgtcaaattatttggtagatttgttgtgcatataataattttttattcagtcaaattaaggccttctttggatatttacctatgttttttcccgataagtaagctatgttgaaaaggttggagccttgaaggctaagtagaattttttttttatcaaaggctcacgcccagctttttgagctaagtagaaatctttgctctgttctccaaagccatatgacctttttatatgaggagccatcagttgcttgtgcagttgatgaaatttaaacacaaattttgtgtaccataaatgtgtatgacactaatgttgttgatctttaccttagaaatatcaggaacaatgttccaacatacagactagctgtagtttgtgctggatcctcattccatttgacctagggtttcacggggtgacaataatctatctttggcaggtctaaaaaatccaatcaccctgatgagtcatgtaaccccagtgatggccatagccaccatggtactctctctcttaatggatccttggagcgattttcagaagaacacatattttgatagcccgtggcatgtcatgcgcagttttttacttatgcttgttggaggaaccttggcctttttcatggtaatgagcatttattttatcacaaacttgttagtagtatcatatatgttgtcatgatgttttgttttaaatgcaggtgttaacagagtatgtacttgtttcagcaaccagtgctataactgtgacaatagctggggtagtaaaagaagctgtaaccatcttggtaaaatttaaaatttgtatatatcttccaactttcatcatctatagcagaatctgaattttattgaccccttgcaaggtagtatcttaattctacctaatatttaagtgaatactgctattaataacagagaacgcttcatttgaactagaaccaggataataaacatggtcaaccattgataactcatgaaaagaatgactaatagtcttgaaccggtttttttgagtgttccttttctaaatattttttatgcacccaaggaaaaaaaatacaaccagcagcttcctcgattttaaatcatgatcagtaagttattcaatttttggcacatctaaagtttaaagatagcttgcgtaataaaagaagctgtcagtagtgttacatgacaatcaacgttttgtattagtagtattaccatgaatatcataccatgattggcaatatctctatatataaatagaaccctatactccataagttcagattaggcatgcttctaggtataggcatctgcaactgtgattgaagaaattttccaccttgtcctttcaggtcgcagtattttatttccatgatgagttcacttggttgaaagggcttggtctcgccaccatcatggttggagttagcttattcaattggtacaagtaagtgtctatttttttgaaacatttgcaactttaactcatgggcaacacaaatgtgagtccatagttcttaacttgtatagaaaagggctaatgaactaacagaggaatagcattcagaataggttaacatgagataatgccataatgaatggtaagctagttcaaaatgctagtagcatattccatattgctaaaccgattgttgttttttacctagtagttgattctttttgcatcaagtttgcaatcgtcaaccgatctttagatcttaagtcttacgacatcataataatcgcactacacattaagcacttactgtaccacatatcacataattgattccttgacatgctattcttttgccttttcatggtgtgacgatatcttatttattgctaatcataatcataggtatgagaaatacaaaaagggtcacataaatgaggatgaagttaattcaccttcattcgatggagatgccaaatacatcattctagatgacttggaggaccaggatgagtttcaggatgaagatacataattttgcaatgtggcaacattttaactgtcacttggtaaggacctcttgcatctcttgtccaatatggacaccctggcatgactgagtaggctctaggcgcgcgtgtttgattatacaattccatatttgccaaaaatgtttgaacctgcaactgaaccaacataatattcatgccaaataatgctgcaattagatatgtcaataccatttctgacataatatttgttcggattaatctgtggttctgttctctcgttttgctcaccatttttgtcccaaaattgatgcagtgatgatttgactaatccaattttggcaggatttttatgccctgaaaccattcatgtctgcttattgattgaaactataagtacttatggatgtttccacttaaacgaggtgtcacggacaagggcactgctagacttgctgatgttctgcaaccaaacttaaaaattatctgccggagcttgtccgtctccaaacaatgaaatggtttctcacttctcatccttcattaaatagccaggcaaactaagagctaacttcatcgaaatccccatttttgagaagattggcagcagttgaaattgttatggctgtttatattggtattgcctgagaatggacgtcatttacgtgtttttcttctctttgtgcgagctggaacatgcacatattcattcttaaacctccacatttttggtgcctaggaatattcattctatatagatcaaattgtaagagttaccacacatacctccatatttgctgttcccttgaaagttagggagcagccttttgattgtttgtatttgtagaattgtagcatgttatatactgtaacttgtactgtaacacttccagtctacttggaatcacaagttttaaatttgtgtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0153200, RefSeq:Os06g0153200