Os06g0153800

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Revision as of 09:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0153800| Description = Beta 5 subunit of 20S proteasome| Version = NM_001063377.1 GI:115466485 GeneID:4340166| Length = 2943 bp| Definitio...")
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Gene Name

Os06g0153800

Description

Beta 5 subunit of 20S proteasome

Version

NM_001063377.1 GI:115466485 GeneID:4340166

Length

2943 bp

Definition

Oryza sativa Japonica Group Os06g0153800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2770074..2773016

Sequence Coding Region

2770396..2770523,2770972..2771072,2771161..2771264,2771354..2771488,2771559..2771665
,2772583..2772712,2772827..2772955

Expression

GEO Profiles:Os06g0153800

Genome Context

<gbrowseImage1> name=NC_008399:2770074..2773016 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:2770074..2773016 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagctggacgtctccgccatggagaacaacttcgccgcccacgccgccggcggcgaggacgacggcggcctcttcggcgccggcgccgacctgcccgccatggagctccccacctgccccgccgacttcgacgggttccagaaggagaccaaggagatgctgaagcacaagaagggaacgaccacgctcgcgttcatcttcgacaagggcgtcatcgtcgccgccgactcccgcgccagcatgggcggatacatatcttcgcaaactgtgaggaaaattattgaaataaatccgtacatgcttggaacaatggcaggaggtgctgctgattgtcaattttggcataggaacttgggcatcaagtgccgactccatgagctcgcgaacaagcggaggatctctattgctggtgcttcaaagcttttggccaacatcctgtactcctaccgtgggatgggactgtcaattggtacaatgattgctggatgggatgagaagggtcctggcttgtactatgttgatagtgagggcgcaaggctcatgggaagccgattctctgttggatcaggttctctgtatgcctatggtatcttggacgagggttaccgctatgtgatgccagttgaggaagctgctgagttagcaaggcgggctatttaccaagctacattccgtgatggggcaagtggtggttgtgttagcgtttaccatgttggcccgaacggctggacgaagctttctggagatgatgttggggagctgcactacaagtactacccggttgaggccactcctgtcgagcaggaaatggccgatgccccagctgcttaa</cdnaseq>

Protein Sequence

<aaseq>MKLDVSAMENNFAAHAAGGEDDGGLFGAGADLPAMELPTCPADF DGFQKETKEMLKHKKGTTTLAFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYML GTMAGGAADCQFWHRNLGIKCRLHELANKRRISIAGASKLLANILYSYRGMGLSIGTM IAGWDEKGPGLYYVDSEGARLMGSRFSVGSGSLYAYGILDEGYRYVMPVEEAAELARR AIYQATFRDGASGGCVSVYHVGPNGWTKLSGDDVGELHYKYYPVEATPVEQEMADAPA A</aaseq>

Gene Sequence

<dnaseqindica>2494..2621#1945..2045#1753..1856#1529..1663#1352..1458#305..434#62..190#aaagaaaaaaagagagaaaaaactcactgcatcgcctccgcctctcgccgccatcgccgcgatgaagctggacgtctccgccatggagaacaacttcgccgcccacgccgccggcggcgaggacgacggcggcctcttcggcgccggcgccgacctgcccgccatggagctccccacctgccccgccgacgtgagtgccctagctttgtcgatttcgatccccttttgccgcgatctgattctcttaagtttctaaaccctcgattgatctctggtggtgtgtgtgggtgggggatgcgggcagttcgacgggttccagaaggagaccaaggagatgctgaagcacaagaagggaacgaccacgctcgcgttcatcttcgacaagggcgtcatcgtcgccgccgactcccgcgccagcatgggcggatacatatgtgagcgctcggccctcttcctctctcgcgcttcgattttaggggcgtcttagggtttggcagctgcgcttaatttgtgatgtggtcgtgtgattcgggcctgagaagtttagatcttaatgcggaatttgatgcattggtctgtcgatgggtggagtagcaagatctcatacttataggtgcatggaaagttgcggacttgtggttatctacgagatttgtgttctccagtgatatttaggtttggaattgatagggagattcttaattcaataactagactagactagagtagggaaatctgcatacagtggttcttttacactttatcagagaacgaaggaaactagttggtagtgtttggttatgaatggtgtggtgaaggctttatactgtaaactagtttatttaggaagatagtttactttatttagtgttaatggatagcgtagaactatttgtcgacagattgggatttgatgtagtgtagataagctaggtttctggtgggaaaaggtttgctttgaaaagatttaccctaggatgcaagttgtgtacagtggtacatgatgagtcaaatgttttgcgaaggtcaggcttttatgcttacctatttatcatttatgctctttgtgctttggatggatataaagttcaaccctgtactctagagaattacactgttttgtgtggaaatcactgatctgaactgacagtacaacacaatgaccctaagtgctattattttcttattacaagttctaatccttttgtaaaaacttgtctttgaatattatcatagaaaagtaactttgtcaaaatgcttgttgctgtttcagaagaccttgctttattgcaaggatggtcacttaatcttacttattgggtcttaatatcacatttcttcttacctgcagcttcgcaaactgtgaggaaaattattgaaataaatccgtacatgcttggaacaatggcaggaggtgctgctgattgtcaattttggcataggaacttgggcatcaaggttagatttcaacttgattgtacttgcatttcatcattgcagagaactaaaagtaggttatgcttttcagtgccgactccatgagctcgcgaacaagcggaggatctctattgctggtgcttcaaagcttttggccaacatcctgtactcctaccgtgggatgggactgtcaattggtacaatgattgctggatgggatgagaaggtgaattcagcctacatgcctttgattagaagtcttaagtttatgtgctgtgtgctactctatacttaatgtgttctatctcgatctagggtcctggcttgtactatgttgatagtgagggcgcaaggctcatgggaagccgattctctgttggatcaggttctctgtatgcctatggtatcttggacgaggggtaggttttatcttttatttacctccttttatgttgctttgctgcttgcttatactgtgttacttacgtatgaacttccgcttttcagttaccgctatgtgatgccagttgaggaagctgctgagttagcaaggcgggctatttaccaagctacattccgtgatggggcaagtggtggttgtgttagcggtatgctttctgtttaccggtctctgcttcatgatatctcttgtgataatttctattcctgtcatgtttccactttccacacaactgtctgccttaattatggcttggattcatattaaatcaatccatcttactgcatttaacagtaacatcaaacaacctttagggtatatcattgatacattgttagtcatcaacaatttttattagatatgcattttagcaccttggtaacagcattggtgattcaatcaacaaataatgctgaagtacctttcgcttgttacgattgggggaaattatgtgtgctacataggacttttggagggcacagttacaaaatgaagatcctattgattatctgctgactgcaccccgcttttgttagttcaaacatgaattgtgggattgtgccagaactgacgttatccttttgtttgaatttcagtttaccatgttggcccgaacggctggacgaagctttctggagatgatgttggggagctgcactacaagtactacccggttgaggccactcctgtcgagcaggaaatggccgatgccccagctgcttaaacctccctctgcccaatctggcgcatggtatccagggctgtgaactgtagaagcgcccttgtctatgaacttgtttggacatgtttctctcgtcgatgttgagagatctcttttgagatcagctgatgtttctcattaactttacgctactgctaccgcaaatgtgattgtagactcgtatagatgctttttattcatgtttcctttacattggtagtgccccgactccgtatgccttgcctgtgctgcgttcacctatgtttctcgatatcacgccttttcgttgctgaatacacataataaatatcactaatttttatgt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0153800, RefSeq:Os06g0153800