Os06g0158100

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Revision as of 09:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0158100| Description = Similar to WRKY transcription factor 63| Version = NM_001063398.1 GI:115466527 GeneID:4340188| Length = 3253 bp| De...")
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Gene Name

Os06g0158100

Description

Similar to WRKY transcription factor 63

Version

NM_001063398.1 GI:115466527 GeneID:4340188

Length

3253 bp

Definition

Oryza sativa Japonica Group Os06g0158100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2958755..2962007

Sequence Coding Region

2958755..2959119,2960477..2960602,2961323..2962007

Expression

GEO Profiles:Os06g0158100

Genome Context

<gbrowseImage1> name=NC_008399:2958755..2962007 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:2958755..2962007 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacggaggagacatccacctgctgctgagcatcctcgccgacggcgaggagcaggcccggcagctcggcgagcccgccgcggcggccgacgacgagtaccacggcggcggccgcggggaggagtactacaggggcgtggcgcggcagctgcagggcacgctcgcgagggcgatgggcatcgcgagggccatcgaggcggcggccttcgccggcggcggcggcggcggcggcgcgtcggggtcgcgcggcaccaccggcgaccgctccgactcgccacggtcggcggacgagagctcgggccggacggcgagggacgccgccgtcgcgcagcaagaacgccaccatgacacgatcaagagaaggaagggcctgccaagatggacagaaaaattcagagtgccagatgcaagtttggaggctacaccagatgatggattcagttggaggaagtatggtcagaaggacatcctcggtgccaaattcccaaggggttactaccggtgcacgtatcgcaacgcgcaaggctgcccggcgaccaagcaggtgcagcgctccgacgccgacctcgccgtcttcgacgtcacctaccagggcgcccacacctgccaccagaagcagcgccgcgccgccgccgccggcgaccaaccgcctccgccgccgccgcaggccgacccgagcgtggagctgctcgtcaacttcaggcacggcctgaaggtggagaccaacgggctggctcctccgccgccgccgcctccgacgacgacgacgaacttccacgacgaccagcacttctgcttcccctccatgccgccgttccacgccggggtggggccaccgccgccgccggacgacgcgctaggaggagggtgtaataatttctcctcgccgccgttcgtctcgccggccggttcggccgccggcgagagctacttctccatggagcactcctacgagccacggggaggcggcggccacttcgtcatgagccgaggggactcgtcggagctccacgaggtcgtctccgccgccgcctcctcctccgccgtggtcgaccctgccgccgccgccggcgggttcgactacccgctgtaccacggcgaggtcgacccgcacctgccgttcccgccattgtttggccacgcttccatgtacggccaatacagagacgcgtga</cdnaseq>

Protein Sequence

<aaseq>MDGGDIHLLLSILADGEEQARQLGEPAAAADDEYHGGGRGEEYY RGVARQLQGTLARAMGIARAIEAAAFAGGGGGGGASGSRGTTGDRSDSPRSADESSGR TARDAAVAQQERHHDTIKRRKGLPRWTEKFRVPDASLEATPDDGFSWRKYGQKDILGA KFPRGYYRCTYRNAQGCPATKQVQRSDADLAVFDVTYQGAHTCHQKQRRAAAAGDQPP PPPPQADPSVELLVNFRHGLKVETNGLAPPPPPPPTTTTNFHDDQHFCFPSMPPFHAG VGPPPPPDDALGGGCNNFSSPPFVSPAGSAAGESYFSMEHSYEPRGGGGHFVMSRGDS SELHEVVSAAASSSAVVDPAAAAGGFDYPLYHGEVDPHLPFPPLFGHASMYGQYRDA</aaseq>

Gene Sequence

<dnaseqindica>1..365#1723..1848#2569..3253#atggacggaggagacatccacctgctgctgagcatcctcgccgacggcgaggagcaggcccggcagctcggcgagcccgccgcggcggccgacgacgagtaccacggcggcggccgcggggaggagtactacaggggcgtggcgcggcagctgcagggcacgctcgcgagggcgatgggcatcgcgagggccatcgaggcggcggccttcgccggcggcggcggcggcggcggcgcgtcggggtcgcgcggcaccaccggcgaccgctccgactcgccacggtcggcggacgagagctcgggccggacggcgagggacgccgccgtcgcgcagcaagaacgccaccatgacacgatcaagagaaggtgcgtgtgtgtgttcaaattcgtctaaacaaaaaaaaatctctctctttcagttcgttttaaaatttctctttcaatttgctttaaaatctctatcactgtctcacacacacgtttggcattttggccgtcgtcacatcactttaattttttttaaaaaaatggcgcgaaactaaggacatgcccgccacgcgtaagtcgccacttaagcaaattgagataatggatagagtatattatcatcggcttgtcttatctgaaactgaataaggataaaattcgtgtcaccctttctaagcccctatttgtgtacatggttggacttgtttagagccttaaactttttttttgttataaatctcttgccttaatgttaagaatggctcttatcagtccagctacagtctataactataagtcgtagacaaattaacgaagtaataaaaaaataatattccctccgttttttaatagataacgccgttgactttttctcacatgtttgaccattcgtcttattcaaaaaatttacgtaattataatttattttgttatgagttgttttatcactcatagtactttaagtgtgatttatatcttatacatttgtataaaatttttgaataagacgaatggtcaaacatgtgagaaaaagtcaacggcgtcatctattaaaaaacggaggtagtatctaggtaaaattttacaagtcaaggctaaaaaaataaaccgtggtaaaaaaactcaaaaccaactctaaaatttaatttgctaaaaaaactaggtttaaaatcaagtcactgttttttttctttttagcaaaaagggcaaatgatctacctaatgcgttatggatgtagatgagtatgtatgtcgtctctgtgttgtatcatggtgcaatgtgaattttttagcttccagttccacatgtttttggtagttccaaaatatcgatgtctccggttaatcaatgtcagggggaaaacccattcgaaatatcattgtgactctaaacagaggatatttaatttcctaaaaaaaaggctatttaatttgtggttatttgcttaaatataaaaagaacaaattccgttttcaaaccaatcatatgcaaccgtcaaaaatatatttgaaaaggacctaaccccaaggacgggcaatgtagaaatccatgtcatagttctttggtcaaaagcatggaaacagtcataatcataagtggaaacagtcataatcataagcatacagctgtactgaattattagaatttgcctgagtcaaccaaaggaaaaaaaggagtcaaatatcattgactgaccatttggtataattttcttggctctaaatcatcatacaggaagggcctgccaagatggacagaaaaattcagagtgccagatgcaagtttggaggctacaccagatgatggattcagttggaggaagtatggtcagaaggacatcctcggtgccaaattcccaaggttagctcaacatatcattttatacatgttttaatttaaaccttggtaattttaaacataagtatatttctaaatatttagattggatgcatgaaaacatattgtaggttaaaaaaatattataataattttgtcaggattattattattttgaataaaactagtggtgaaagatcaattttgaagactgtaaatacccaaaacagcttgtttcttgacgggagggagttaaacctacaaaattcattccccacaaaaaaaaaccctacaaaattcaccattatttgaagcccccatagttccaaacacaaaaatcgaatcattttacagcctcatggctgactctacggttgataagcttaaaaaaaatcgaagcagtcaaaaataatttatgggtacaacttttatataagtatatttaatgatttaaaagttaatgatgaattactgataaaacatgatatttttttaaaaaataaagttaagtttcaatttttatattttggttgtggttaacaaacgataaaagcttttgattgggaggcctagtccgagcccaatcgatttatcgtggcaaattcatttcttaaaattgggtcaaaattaacattctcagttttttaaagcttgtgggccgacaaaaagaaagtaaaaaaatgaacgggccagatgcatgatctgatgcctcctgtcactgacacgtgtcggatggattcgcaggggttactaccggtgcacgtatcgcaacgcgcaaggctgcccggcgaccaagcaggtgcagcgctccgacgccgacctcgccgtcttcgacgtcacctaccagggcgcccacacctgccaccagaagcagcgccgcgccgccgccgccggcgaccaaccgcctccgccgccgccgcaggccgacccgagcgtggagctgctcgtcaacttcaggcacggcctgaaggtggagaccaacgggctggctcctccgccgccgccgcctccgacgacgacgacgaacttccacgacgaccagcacttctgcttcccctccatgccgccgttccacgccggggtggggccaccgccgccgccggacgacgcgctaggaggagggtgtaataatttctcctcgccgccgttcgtctcgccggccggttcggccgccggcgagagctacttctccatggagcactcctacgagccacggggaggcggcggccacttcgtcatgagccgaggggactcgtcggagctccacgaggtcgtctccgccgccgcctcctcctccgccgtggtcgaccctgccgccgccgccggcgggttcgactacccgctgtaccacggcgaggtcgacccgcacctgccgttcccgccattgtttggccacgcttccatgtacggccaatacagagacgcgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0158100, RefSeq:Os06g0158100