Os06g0161900

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Revision as of 09:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0161900| Description = Protein of unknown function DUF569 family protein| Version = NM_001063422.1 GI:115466575 GeneID:4340213| Length = 30...")
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Gene Name

Os06g0161900

Description

Protein of unknown function DUF569 family protein

Version

NM_001063422.1 GI:115466575 GeneID:4340213

Length

3006 bp

Definition

Oryza sativa Japonica Group Os06g0161900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3130222..3133227

Sequence Coding Region

3130915..3131433,3131856..3132117,3132868..3132908

Expression

GEO Profiles:Os06g0161900

Genome Context

<gbrowseImage1> name=NC_008399:3130222..3133227 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:3130222..3133227 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcagttccacgacgggcaccacgtgtggctgcggagccgcgcccagggcacgtacctccgcgccgacgacgacgggagaggcgtctccatgggccagggccgcgcgtccgtgcacgcggcgtggacggtgcacacgcaccacctcaacgccggcgacgtcgacatcctcatgctccacagcgccgcgaacgggcggtacctggcgacggggctcgggtggacgcggcggcgcctcctcagcggcaaccgcgccagcatcatcctccgcgatctcgaccaggaggtgttcccccccgcctgctggttcgctatcaggtcggggtggggggacgacgtcctgctgcgtcactgcagctggcgcttcctccgagctgacgacaggaaatggaattggaatcggaatggcaccggcgtcatcgccgacatgatcgacggccgccgcctggcgaggtggcagtgggtggtggaggccatccccccgaggaactccatacctaggcctccgaatccttcgccctcattcggtttctttgcgcgtcgcatcattttccggcgattaacacataatgatttacaatgggtttggatctggttcactgggaggtctgcgctccatctatggaaccagctgtcgagacgaatgggcttcgaaccagaccccaactccactatgtgtgttagagcaggaacctacggacggctgactcctctggtgaccgatctgcctcgcaacaatgcgacaatggtgatattcgttctcccacctgagtcattagctggtttggggttgacgtgccccaatgttcatgccgcctag</cdnaseq>

Protein Sequence

<aaseq>MEQFHDGHHVWLRSRAQGTYLRADDDGRGVSMGQGRASVHAAWT VHTHHLNAGDVDILMLHSAANGRYLATGLGWTRRRLLSGNRASIILRDLDQEVFPPAC WFAIRSGWGDDVLLRHCSWRFLRADDRKWNWNRNGTGVIADMIDGRRLARWQWVVEAI PPRNSIPRPPNPSPSFGFFARRIIFRRLTHNDLQWVWIWFTGRSALHLWNQLSRRMGF EPDPNSTMCVRAGTYGRLTPLVTDLPRNNATMVIFVLPPESLAGLGLTCPNVHAA</aaseq>

Gene Sequence

<dnaseqindica>694..1212#1635..1896#2647..2687#gagtttgtgttctgttgctgccgatgcctttcctcacaggcgatggcggatgcgcgcgccgccgccgccgccatcgccgcccgtcgcggcgttggacaaaacccgatccgccgttgggcgtcggcacgtcgcagagcgccgctgttggggcctccactgcttctctgctgccgcggcgacaggatgagctctgttcttactcgcacacgaggtgttcgttgaaatgcttcggagtcggttcgcttgctaatcaggttgcttcttgatgtcacagggaaagcacacatatcgagcatggcattcacgggcgcggtggtcgtggacgacgacgccggccgcgccgtggtgagcgcgtgcgtggcgtgtggtgcaggtgcagcagctagctctcgttgcttccggcgaaacgggcatgacgtcatccagcatgtgggaccagcgggcccacctgtcagaggagccggaactgcggccccacctgtcagcgaagggggacaactcctttaaattgcggccgccttggcgctgacgctgagagccccgagccgtaacaaactcctctcctctcgccggagagcgcaagaaaccaagcggcgcgccgcctccgcctccgcctccgctgctcgccgaccggagaggcaagacatcaagagccccgccgccgccgcctctgccgctcgccggagggaggcaatggagcagttccacgacgggcaccacgtgtggctgcggagccgcgcccagggcacgtacctccgcgccgacgacgacgggagaggcgtctccatgggccagggccgcgcgtccgtgcacgcggcgtggacggtgcacacgcaccacctcaacgccggcgacgtcgacatcctcatgctccacagcgccgcgaacgggcggtacctggcgacggggctcgggtggacgcggcggcgcctcctcagcggcaaccgcgccagcatcatcctccgcgatctcgaccaggaggtgttcccccccgcctgctggttcgctatcaggtcggggtggggggacgacgtcctgctgcgtcactgcagctggcgcttcctccgagctgacgacaggaaatggaattggaatcggaatggcaccggcgtcatcgccgacatgatcgacggccgccgcctggcgaggtggcagtgggtggtggaggccatccccccgaggaactccatacctaggcctccgaatccttcggtgagcacgtcatgcccctgtttcctttcctgattcttgcataatcgattgcgttactgggttcttcagggctaggctaattcttgatcttttcctgtgattgctggaattttcgttactgggttcttgatcttttcttgtgattgctgcgaaattctgttagttccgcctctattgctaatttgctaatctcgtgttcccgggaaagtagatcttactagcattttagctctaggtgtccattctctatgttgcattcgtaaggaggggggggggggggggtggagcagttcttcgtttcatctgtcaggttgccacctatgttcggttcttgaaaatggcgacatccccactgctgttctttcttactaagttcttggtcctcagttacttcgtgtttgtaacgatcttctttgctgcagccctcattcggtttctttgcgcgtcgcatcattttccggcgattaacacataatgatttacaatgggtttggatctggttcactgggaggtctgcgctccatctatggaaccagctgtcgagacgaatgggcttcgaaccagaccccaactccactatgtgtgttagagcaggaacctacggacggctgactcctctggtgaccgatctgcctcgcaacaatgcgacaatggtgatattcgttctcccacctgagtcattaggtgagatatgtacctgtgcaagacttgctgtcgccttcttgttttatggctattggctaatgttctatagattacatgctcatggtattcatttagtcttgaatctctcgtgcgcattgcagtgctctagatcagtcgtactgttgctgcatgtttcatgaaaatttctgtgctgatttctttctaatgaaatgctatcaataaagtccaatccacttgtcctcagggaaaattcctatagataagaaaatggactcaagtaagaataagtaggtattcagagtttggcatgtggattttcaatctgtgtacagatgctaaaatatggcctgaagttaattttatggctgggaaggtagtagtgttgaggggtttaagcccagaccatcccaaatcccaatgagatcttttcagtctaagaaatagttgtttttttttaatttaaggcaatcttgcatgtgttgtgcatactctcactgtaaaaaagacaataagttaatcttgcatgcgttttgtatcatacaaatatacgatagacagcactgctgccgttaaatcattacaccagcttctgctcattatgctggtttctagatgagttatccgttttattttgctgttcattttcttatttcacaaaaaggtgacctcagatgtttttagatggtttctgaatattgaatggcttgtgagctgtaatatctgtaattaacttgtctcatcgttttgtttgtccctttgcaaattcagctggtttggggttgacgtgccccaatgttcatgccgcctagaggaagacagaagaactacaggagcagaacccctgacagtcacttgttcattcgtcccttcagaaaattacgctgcttcagatcgaatgacagagaactgaatgtcttctctctctctctctctttggtatcaactcttctgtttcccggtcattagatattactggccattgtgctctgaagttcacgaactgcattaagcaactaaggagaatgtgtacctggcaattgtgtgttctgacatttgctgtagtttctccatcgttatctgtgattctgtatgacacgagtgatgatcatccatacatttgcagaagtg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0161900, RefSeq:Os06g0161900