Os06g0166900

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Revision as of 09:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0166900| Description = Protein kinase-like domain containing protein| Version = NM_001063451.1 GI:115466633 GeneID:4340247| Length = 3000 b...")
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Gene Name

Os06g0166900

Description

Protein kinase-like domain containing protein

Version

NM_001063451.1 GI:115466633 GeneID:4340247

Length

3000 bp

Definition

Oryza sativa Japonica Group Os06g0166900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3359525..3362524

Sequence Coding Region

3359707..3359777,3360511..3360655,3361150..3361412,3361535..3362159

Expression

GEO Profiles:Os06g0166900

Genome Context

<gbrowseImage1> name=NC_008399:3359525..3362524 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:3359525..3362524 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcacccgaagctgtcgcggttcgcgcacagggtgctctgctgcgggaggaaaggctccggggaggatttgagtgatgaggggagcggatcgttgaggtgggtgttttcattgcgggagcttcggtcagctacaaatagcttcaactatgataacaagattggagaaggaccattcggaagtgtctattggggacaagtttgggatggttctcagattgctgttaagaagttgaagtgcgcaaagaatgggacagaaacagaatttgcttcagatgttgaaattctgggaagagtgaggcacaaaaacctcttgagtttccgtggatattgtgctgatggacctgaacgcgttctggtgtatgacttcatgccaaattcaagtctttatgcacatctgcacggaacacattctacagagtgccttcttgactggcggaggagaacatttattgcaattggtgctgctcgagctctagcgtatcttcaccaccacgcaacaccccagataatccatgggagcgtcaaggctactaatgtgctactcgattcaaatttccaggcacatcttggtgactttggtctgataaggttcatcccagatggggtggatcatgataagataatcagtgaaaaccaacgtggctatcttgctcctgagtacattatgtttggcaaacctacaataggttgtgatgtctacagctttggcataatactgttggagctatctagtgggagaagaccagtggaaaggtcgggctctgccaaaatgtgtggggttcgaaactgggtgctccctttggcaaaagatggcagatacgatgaaattgtggactccaaactcaatgataagtattctgaatctgaactaaaaagagtagtgttggttggtctggcttgcacacacagagaacctgaaaagagaccgacaatgctcgaagttgtatcgatgctgaaaggtgaatctaaagagatgctttccaggcttgaaaatgatgaattgttcaggccagactcgacggtgagttcccatggaatgtcaacaccagaggggagctcggactgtgtgcccaagaatgatcaagaattggcagcggcatga</cdnaseq>

Protein Sequence

<aaseq>MHPKLSRFAHRVLCCGRKGSGEDLSDEGSGSLRWVFSLRELRSA TNSFNYDNKIGEGPFGSVYWGQVWDGSQIAVKKLKCAKNGTETEFASDVEILGRVRHK NLLSFRGYCADGPERVLVYDFMPNSSLYAHLHGTHSTECLLDWRRRTFIAIGAARALA YLHHHATPQIIHGSVKATNVLLDSNFQAHLGDFGLIRFIPDGVDHDKIISENQRGYLA PEYIMFGKPTIGCDVYSFGIILLELSSGRRPVERSGSAKMCGVRNWVLPLAKDGRYDE IVDSKLNDKYSESELKRVVLVGLACTHREPEKRPTMLEVVSMLKGESKEMLSRLENDE LFRPDSTVSSHGMSTPEGSSDCVPKNDQELAAA</aaseq>

Gene Sequence

<dnaseqindica>183..253#987..1131#1626..1888#2011..2635#aagctgcgaggctgttctccgctgtgacgtctcgtctcttcctcctcctcaggaagtccagcgagtccacctccctctcctgctccaccaccaccacctcctccttccaaagattccttctcttcttcttcgtttcaggcgctgcgcgtctgcgggatttggggaggggagcggcggcggagatgcacccgaagctgtcgcggttcgcgcacagggtgctctgctgcgggaggaaaggctccggggaggatttgtaaggatttcttcttctttctttttgttttttactcttgactgcttgttcttgtgttcttggggcttgttgggttcgtggttgtgggagcgcggggggtttggcgtgattcgtggtggaggatttgggaattctccccgattttgtgcgctggtctatcgattcttatcctgggtgggtttggtttagtttggttagatgagacgggatgaaacctagaggctagagatgatgtgcagtctggttgctccagtgattgggtactggaagttgtctgtttggtactgaatttgataggaaaaacgataaatcttggtttagttttggaacaattctgtaaaggtagtggttttatagcagtgtaactagtggaatttttggggaaacagagacagtctactgttttagactgtcgaaatgtgtgatgttcagtatggaattccttttgtagctctcatatatgctgttttcgaatccttttgtgtgaataatcgattttacaaagtgaatgaaaatgaaatatgctccgataatactgtaggattaaatgctatggtaatttggcatggtagttttctttttgatgcatcatcaggatgtgtcagtcaattcgagtgggtaccatatcagttgaagggaaagaaatagtttgaattgttactttacctaaccgtggtgctaaaacgtggtagactggtatctcatattctgtttcatggcttcgatttaacaggagtgatgaggggagcggatcgttgaggtgggtgttttcattgcgggagcttcggtcagctacaaatagcttcaactatgataacaagattggagaaggaccattcggaagtgtctattggggacaagtttgggatggttctcaggtttctattcttgacatctcagtcgatttgatctacatgtcatgtcaagaaatagaatttcaactgtctcctttagatatcttgctttgtagttggcccagccaggaatcatcattaatttgcagcgttggaaaatcttattgatagctgtctcactaagtaaccaaacaactatcagctagaattttttattcggttgcagagcattgatctttgattgcattatcattaagtaggtaggatatgttgtcataggcaggtcaacttagacaaaatttggaagatggactggctacaggtttgcagatctgtatcttgtacaataaaagaaggctcaacatattccctgtcatggctgcaactaagttgtatgtcttttaaaaggactgttaaccgtaacctaccacaattttgtagcagtttgcccgtctgaagattcttcttctataacaaggtttcttgattatttcaattgctaatgtttttttatacagattgctgttaagaagttgaagtgcgcaaagaatgggacagaaacagaatttgcttcagatgttgaaattctgggaagagtgaggcacaaaaacctcttgagtttccgtggatattgtgctgatggacctgaacgcgttctggtgtatgacttcatgccaaattcaagtctttatgcacatctgcacggaacacattctacagagtgccttcttgactggcggaggagaacatttattgcaattggtgctgctcgagctctagcgttagtaaaagaaacctcatctttgttcattactgcacagcatacataatctctgcttctcagtttctctccttctggtaagctgtcacagaagaaactcactcatatgagcttctccacaggtatcttcaccaccacgcaacaccccagataatccatgggagcgtcaaggctactaatgtgctactcgattcaaatttccaggcacatcttggtgactttggtctgataaggttcatcccagatggggtggatcatgataagataatcagtgaaaaccaacgtggctatcttgctcctgagtacattatgtttggcaaacctacaataggttgtgatgtctacagctttggcataatactgttggagctatctagtgggagaagaccagtggaaaggtcgggctctgccaaaatgtgtggggttcgaaactgggtgctccctttggcaaaagatggcagatacgatgaaattgtggactccaaactcaatgataagtattctgaatctgaactaaaaagagtagtgttggttggtctggcttgcacacacagagaacctgaaaagagaccgacaatgctcgaagttgtatcgatgctgaaaggtgaatctaaagagatgctttccaggcttgaaaatgatgaattgttcaggccagactcgacggtgagttcccatggaatgtcaacaccagaggggagctcggactgtgtgcccaagaatgatcaagaattggcagcggcatgatggattagtaccctaggaaatgtagagtcgcattttttttgtgggattggtgcttggtctgcttggtttggcatgattcaaatgtacaggcattgtcatttgtgaaggtttctcctctttttggagagaggaaattagatgaatgatgagttagcagttatacatggtgctttttttggcaaagaattattatacatggtgctttttgtgtgcactggatagaagatccatatacttggcctgatgtttgggtatgattggtcatgttgtcatataaattattctttaatgctgatatctggatgattgaattgtgtttgtatcttatgattgaaacttctgcacaacacaggagtaaatactgc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0166900, RefSeq:Os06g0166900