Os06g0167200

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Revision as of 09:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0167200| Description = Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein ATL8)| Version = NM_001063454.1 GI:115466639 GeneID:4...")
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Gene Name

Os06g0167200

Description

Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein ATL8)

Version

NM_001063454.1 GI:115466639 GeneID:4340250

Length

1372 bp

Definition

Oryza sativa Japonica Group Os06g0167200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3388075..3389446

Sequence Coding Region

3388185..3389276

Expression

GEO Profiles:Os06g0167200

Genome Context

<gbrowseImage1> name=NC_008399:3388075..3389446 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:3388075..3389446 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggtcgccggagtaatcaggagcaaccaggatggcggcggcggcggcgggacggtgtccggtgcggcgaggattagcccggcggtggtgttcgtcctggtgatattggctgtggtgctgttcgtgtccgggttgctgcatcttcttgtcagattcttgctcaggcgcggccgtgggcgagatggcggcggcggcggcgacgcggaggcggcggagggtgtggaggagtcggcgttgcaacggcagctgcagcagctgttccacctgcacgacgccgggctggaccaggacgtcatcgacgcgctcccggtgttcatgtaccgggaggtggtggtcggcgtcggcggcggcggcggcgcgggcggcggagccaaggagccgttcgactgcgcggtctgcctgtgcgagttcgccggcgacgaccggctccggctgctgccggtgtgcggccacgcgttccacatcgactgcatcgacacgtggctgctctccaactccacgtgcccgctctgccgcgccgcgctcggcgccgacgccgccgctctgttcgacgccgcgttcgacgagatggccgacgaggaggaccggaagcagcaggaggacgccgtgttccccgtccgcctcggcaagttcaagaacctctccagggcggtcggccccgtccacgaccgcgacgacgccgccgccgccgccgccggcgtcggcgtcggcggtggcattatcacgcgagaggaaggcgagtcgagcagcagcagcttggacgccaggcggtgcttctccatgggctcctaccagtacgtcctcgccgaggcgagcttgcaggtgtccgtacaccggaggcacggcgacggcaatggcagggcgaggctgagagggctcgccggcgccaacccggccggcaacgacgccgccgccgccgccgacgggaagaagatcggcgccggcagcaagggcgacagcttctcggtgtccaagatttggcagtggccgcggcaaggcaaggggaagctgccggtgctcgcctccgacgactcgccggcggtggacggccggctgccgtggccgaggagaagccccggggcttcctga</cdnaseq>

Protein Sequence

<aaseq>MMVAGVIRSNQDGGGGGGTVSGAARISPAVVFVLVILAVVLFVS GLLHLLVRFLLRRGRGRDGGGGGDAEAAEGVEESALQRQLQQLFHLHDAGLDQDVIDA LPVFMYREVVVGVGGGGGAGGGAKEPFDCAVCLCEFAGDDRLRLLPVCGHAFHIDCID TWLLSNSTCPLCRAALGADAAALFDAAFDEMADEEDRKQQEDAVFPVRLGKFKNLSRA VGPVHDRDDAAAAAAGVGVGGGIITREEGESSSSSLDARRCFSMGSYQYVLAEASLQV SVHRRHGDGNGRARLRGLAGANPAGNDAAAAADGKKIGAGSKGDSFSVSKIWQWPRQG KGKLPVLASDDSPAVDGRLPWPRRSPGAS</aaseq>

Gene Sequence

<dnaseqindica>171..1262#cctttgctttggccattttctcaagcacctaatttgcttggatccttcttgcacttgcaacttgcaaaacaaccaaaggaaatactagtagcatcatcaagcgaagaaggtcagctcaaaagggcgttgtgtgcttcgcctcgcgaaatgagagtcgcattgctccggagatgatggtcgccggagtaatcaggagcaaccaggatggcggcggcggcggcgggacggtgtccggtgcggcgaggattagcccggcggtggtgttcgtcctggtgatattggctgtggtgctgttcgtgtccgggttgctgcatcttcttgtcagattcttgctcaggcgcggccgtgggcgagatggcggcggcggcggcgacgcggaggcggcggagggtgtggaggagtcggcgttgcaacggcagctgcagcagctgttccacctgcacgacgccgggctggaccaggacgtcatcgacgcgctcccggtgttcatgtaccgggaggtggtggtcggcgtcggcggcggcggcggcgcgggcggcggagccaaggagccgttcgactgcgcggtctgcctgtgcgagttcgccggcgacgaccggctccggctgctgccggtgtgcggccacgcgttccacatcgactgcatcgacacgtggctgctctccaactccacgtgcccgctctgccgcgccgcgctcggcgccgacgccgccgctctgttcgacgccgcgttcgacgagatggccgacgaggaggaccggaagcagcaggaggacgccgtgttccccgtccgcctcggcaagttcaagaacctctccagggcggtcggccccgtccacgaccgcgacgacgccgccgccgccgccgccggcgtcggcgtcggcggtggcattatcacgcgagaggaaggcgagtcgagcagcagcagcttggacgccaggcggtgcttctccatgggctcctaccagtacgtcctcgccgaggcgagcttgcaggtgtccgtacaccggaggcacggcgacggcaatggcagggcgaggctgagagggctcgccggcgccaacccggccggcaacgacgccgccgccgccgccgacgggaagaagatcggcgccggcagcaagggcgacagcttctcggtgtccaagatttggcagtggccgcggcaaggcaaggggaagctgccggtgctcgcctccgacgactcgccggcggtggacggccggctgccgtggccgaggagaagccccggggcttcctgatgctgatttccatggtgtgtttgcaatttgcaaaactttttcagagctaattctgctcatctttttaacaccgtattaatcaatctgttcatagccaattcgttccattc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0167200, RefSeq:Os06g0167200