Os06g0178300

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Revision as of 09:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0178300| Description = 2OG-Fe(II) oxygenase domain containing protein| Version = NM_001187705.1 GI:297724540 GeneID:9266216| Length = 2035 ...")
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Gene Name

Os06g0178300

Description

2OG-Fe(II) oxygenase domain containing protein

Version

NM_001187705.1 GI:297724540 GeneID:9266216

Length

2035 bp

Definition

Oryza sativa Japonica Group Os06g0178300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3895491..3897525

Sequence Coding Region

3895491..3895739,3896080..3896237,3896479..3896773,3897274..3897525

Expression

GEO Profiles:Os06g0178300

Genome Context

<gbrowseImage1> name=NC_008399:3895491..3897525 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:3895491..3897525 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgacggccaccactggaacattgtcaagataccgccgattgtgcaggagctcgccgccggcgtccatgagccgccgagccagtacatggtcggcgagaaagaccgccctgccatcgccggctccgacatgcctgagcccatccccgtcgtcgacctcagccggctgtctgcctccaatggtgaagacagcgccggcgagcttgccaagctacgctccgccttagaggactggggcctcttcctggggagcattctcagtgagatgatcaatgtgacaagaggattctacaagctcccactggaagagaagcagaagtactccaacctggtgaacggcaaggatttcaggatcgaagggtacggcaacgacatggtcgtgtcagagaaacagatcctgaactgggagatcaccagccttgtgctcgccagattggccaggctgctcggcctgcgagagggctacttcgtcgacatgttcgacgaggacgccacgacgtacgcgaggttcaactactaccctcgctgcctgaggccggaggatgtgttgggcctgaagccacactccgacggctcggtgatcaccgtcgtctccgtcgacgacaccgtcagtgggcttcaggtgctgaggcaaggcgtctggtacgatgtgcccgtcgtccccaatgctctgctcatcaacatgggggatggaatggagataatgagcaatgggttgttaaagagcccggtgcatagggtggtgacgaacgccgagagggagcgagtgtcggtggtgatgttctacgcgctggatccggagaaggagctggagccggcgccggagctggtggacgatgagaagaggccgaggcagtatgccaagatgaagatcaaggactacttaagtggcttctacgagacttttgcaagagggacacgagtcatcgacactgtcaagatgtcagaatga</cdnaseq>

Protein Sequence

<aaseq>MADGHHWNIVKIPPIVQELAAGVHEPPSQYMVGEKDRPAIAGSD MPEPIPVVDLSRLSASNGEDSAGELAKLRSALEDWGLFLGSILSEMINVTRGFYKLPL EEKQKYSNLVNGKDFRIEGYGNDMVVSEKQILNWEITSLVLARLARLLGLREGYFVDM FDEDATTYARFNYYPRCLRPEDVLGLKPHSDGSVITVVSVDDTVSGLQVLRQGVWYDV PVVPNALLINMGDGMEIMSNGLLKSPVHRVVTNAERERVSVVMFYALDPEKELEPAPE LVDDEKRPRQYAKMKIKDYLSGFYETFARGTRVIDTVKMSE</aaseq>

Gene Sequence

<dnaseqindica>1..249#590..747#989..1283#1784..2035#atggctgacggccaccactggaacattgtcaagataccgccgattgtgcaggagctcgccgccggcgtccatgagccgccgagccagtacatggtcggcgagaaagaccgccctgccatcgccggctccgacatgcctgagcccatccccgtcgtcgacctcagccggctgtctgcctccaatggtgaagacagcgccggcgagcttgccaagctacgctccgccttagaggactggggcctcttcctggtaaataaaagtaccactgcattcgtttcatattataagttattttgactttagttaaagtcaaactgttccaaatttgattaaatttatagacaattttggtaatattataacatcaaattattttcattaaatctataattgaatatatttttataatatagttatcttgtgttgaatatattactatttttttctacaaatttagtttaatttggagtacgtttttctttaaccaaagtcaaaatgacttataatctgaaacggattgagtattactttttttttttgggtacctatggtactataaggtgcagggttatttggtactataatggaggggagcattctcagtgagatgatcaatgtgacaagaggattctacaagctcccactggaagagaagcagaagtactccaacctggtgaacggcaaggatttcaggatcgaagggtacggcaacgacatggtcgtgtcagagaaacagatcctgaactggtgcgaccggttctaccacatcgttgagcctgagtcccggatagcccatagcctctggccaacacagcctccttctttcaggcactgaatcttcctaaccttgattaatccattgttcactctgcaatctacacgcatgattaagaacttaaaatctgtcaagttctgccagtacatttgtctgaaatttcctgtttcttttatacagagatgttctgcatgagtacactatgaggtgcagggagatcaccagccttgtgctcgccagattggccaggctgctcggcctgcgagagggctacttcgtcgacatgttcgacgaggacgccacgacgtacgcgaggttcaactactaccctcgctgcctgaggccggaggatgtgttgggcctgaagccacactccgacggctcggtgatcaccgtcgtctccgtcgacgacaccgtcagtgggcttcaggtgctgaggcaaggcgtctggtacgatgtgcccgtcgtccccaatgctctgctcatcaacatgggggatggaatggaggtatatatacatttactccatccgtttcacaatgtaaaactttctagcattgcgcacatatatctagacatatgtatgtatttagattcattaacatctatatgtatgtgggcaatgctagaaagtcttacattgtgaaacggagggagtacttgttagtggttgtttatccaaggatactgcacccatgtaacccaaaccaaaatattacggtgttccaaaagtattctaccatgattcctaaagtatatcatgattccttttatcttctcctgaagaaatctttggagggatcagagatttgggagatctgaacaacaatctgaattgcacgtaaagtagacctgtaaagcttcaattttgagtacatcatcatttacacgtctgattatatttgatcttttagggaattagtccgactaagtagcagaggtcggagatgtaaatcatttccattatctaaaaagatatgactaacagacacctattctgggatgcagataatgagcaatgggttgttaaagagcccggtgcatagggtggtgacgaacgccgagagggagcgagtgtcggtggtgatgttctacgcgctggatccggagaaggagctggagccggcgccggagctggtggacgatgagaagaggccgaggcagtatgccaagatgaagatcaaggactacttaagtggcttctacgagacttttgcaagagggacacgagtcatcgacactgtcaagatgtcagaatga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0178300, RefSeq:Os06g0178300