Os06g0178700

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Revision as of 09:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0178700| Description = Similar to Iron/ascorbate-dependent oxidoreductase| Version = NM_001063500.1 GI:115466731 GeneID:4340297| Length = 2...")
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Gene Name

Os06g0178700

Description

Similar to Iron/ascorbate-dependent oxidoreductase

Version

NM_001063500.1 GI:115466731 GeneID:4340297

Length

2569 bp

Definition

Oryza sativa Japonica Group Os06g0178700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3899489..3902057

Sequence Coding Region

3899583..3899810,3900399..3900658,3901082..3901412,3901669..3901914

Expression

GEO Profiles:Os06g0178700

Genome Context

<gbrowseImage1> name=NC_008399:3899489..3902057 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:3899489..3902057 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgacgagccatggaggctgccaaacatagtgcaagaactggccgccggcgtgcaggagccaccgagccggtacctgcaagacctcgccggcggtgaccagctcgccggcgccgagataccggagcccatcccgaccatcgatctcggccggctgtcaggatcggacggtgccgacgaggctgccaagctgcggtcggctctgcagaactggggcctcttcctggtttctaaccatggcgttgagacctcactgatcgatgctgtgatcgaggctgcgagggaattttttcggcagccagttgaagagaagaagaaactgagcaacctgattgatggcaagcgttttcagatagaagggtatggaaatgatcctgtgcaaaccaaagatcagatcctggattggtctgatcggctgcatctcaaggttgagccagagtgtgacagaaatctagccttttggcccacacatcccaaatcttttagggatattctacatgagtacacactgaagatcaagacggtcaaaaacgatatcctcctcgcattggccaagctcttggagcttgatgaggattgcctcctcaaccagttcagcgacagggccatcactactgccagattcaactactactctccttgtccaagacctgatcttgtgttaggcctgaagcctcactctgacctctgtgctctcaccgttcttctcactgacaaagaagtcggtggcctgcaagttcttagagatggaacatggtacagtgttccagctgtgcgagattactctcttctgattaacattggtgttacactggagataatgaccaatgggaccttcagggctccattgcatagggtggtgacaaatgcagagagggagagaatgtcggtggccatgttctacgctgtggatggcgagaaggagatagagccggtggctgagctgctggggctgaagcaacaatcagcacggtacaggggaatcaagggcaaggacttgttgattggacactatgaacatttctctcgtggtggtagagttgtcgattcattgaagatctaa</cdnaseq>

Protein Sequence

<aaseq>MADEPWRLPNIVQELAAGVQEPPSRYLQDLAGGDQLAGAEIPEP IPTIDLGRLSGSDGADEAAKLRSALQNWGLFLVSNHGVETSLIDAVIEAAREFFRQPV EEKKKLSNLIDGKRFQIEGYGNDPVQTKDQILDWSDRLHLKVEPECDRNLAFWPTHPK SFRDILHEYTLKIKTVKNDILLALAKLLELDEDCLLNQFSDRAITTARFNYYSPCPRP DLVLGLKPHSDLCALTVLLTDKEVGGLQVLRDGTWYSVPAVRDYSLLINIGVTLEIMT NGTFRAPLHRVVTNAERERMSVAMFYAVDGEKEIEPVAELLGLKQQSARYRGIKGKDL LIGHYEHFSRGGRVVDSLKI</aaseq>

Gene Sequence

<dnaseqindica>95..322#911..1170#1594..1924#2181..2426#atccatcttgcctagtgcaagcgtgcaaagccaaaattcaagaaatcacctcgctccatcaagtgagcaagcaaaaccgatcgaacaagttccaatggctgacgagccatggaggctgccaaacatagtgcaagaactggccgccggcgtgcaggagccaccgagccggtacctgcaagacctcgccggcggtgaccagctcgccggcgccgagataccggagcccatcccgaccatcgatctcggccggctgtcaggatcggacggtgccgacgaggctgccaagctgcggtcggctctgcagaactggggcctcttcctggtgagcttctcatctttcattctaaggctgtgtttagatccaaagtttggatccaaacttcagtcctttttcatcacatcaacctgtcatacatacataacttttcagtcatatcatctctaattttaaccaaaattcaaactttacgctgaactaaacacagcctaaacctatttttttgtcggagtatatgatgattttgaactagtgatgggttaaaaaaaacttgcacttgcaccttagggctcattcggtttagaatattttcataagattattgtaggaatcgaatccttagaaatttttttccctatattcatctttcgttttataggaatggattctaccatattcctaaggattgtagtcttacaagttaattccatggaatttttagcatgaggtgagatctcgagaaaaaattcctaaggaatggagtgcatgtgacatcttattcaaaatcctataaacggaataagctcttattctttttgtgacgagtaattaacagtctcttccatcttaatatactctgtcggctgtttgccgacccggcgaaaaaaagtaattaacagtctgtgtgattaggtttctaaccatggcgttgagacctcactgatcgatgctgtgatcgaggctgcgagggaattttttcggcagccagttgaagagaagaagaaactgagcaacctgattgatggcaagcgttttcagatagaagggtatggaaatgatcctgtgcaaaccaaagatcagatcctggattggtctgatcggctgcatctcaaggttgagccagagtgtgacagaaatctagccttttggcccacacatcccaaatcttttaggtaaatcatctcgagtatttttacggtgttctttactaatcgtattatactagcaagatataaaccgttcatttatgagttctactaccagtagaaaaaagtaattctactaccactaattgatgtggtagtatatataaataaatatgatttattgaattggaaaaaaatgaatattctagattggtttcactaccagtagagcactgtaaaacaccccaatcatcttacaaattcacaattatgcatatatgtgctcactgaaaaatatttcgctctgttgtcaatttgcaaaacataattcatctacttctgtgcctgctcaagcagaatttcaggtttcagaaatttcacactcttttcactccaaaaagaagttaaaaaagtcggtttcactgaattacttgagagctatatttgcagggatattctacatgagtacacactgaagatcaagacggtcaaaaacgatatcctcctcgcattggccaagctcttggagcttgatgaggattgcctcctcaaccagttcagcgacagggccatcactactgccagattcaactactactctccttgtccaagacctgatcttgtgttaggcctgaagcctcactctgacctctgtgctctcaccgttcttctcactgacaaagaagtcggtggcctgcaagttcttagagatggaacatggtacagtgttccagctgtgcgagattactctcttctgattaacattggtgttacactggaggtaactatattacatgagaaattttatgatcctcggaaaagtacctcgagattttttttttacctagagataccaaattttatactagaaggtataatacatcccggaatttttttaaggatgataaaattacccatattacatacatgaacacctaagcaaaattctcactttgcatttttgatgaaaaaaagatgtgtgatgtggtcaaatatgttcatggttaatttgtgtttgcccattgtttttgttgcagataatgaccaatgggaccttcagggctccattgcatagggtggtgacaaatgcagagagggagagaatgtcggtggccatgttctacgctgtggatggcgagaaggagatagagccggtggctgagctgctggggctgaagcaacaatcagcacggtacaggggaatcaagggcaaggacttgttgattggacactatgaacatttctctcgtggtggtagagttgtcgattcattgaagatctaacgaagggtaaccgcaaagagtgctattagtactactgtactctctacatagataatattatactacttgtaaaaactatatgagccatcgatttagtaggctataatggtactttttcgtctatacgaattatgctattttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0178700, RefSeq:Os06g0178700