Os06g0180000

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Revision as of 09:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0180000| Description = Conserved hypothetical protein| Version = NM_001063509.1 GI:115466749 GeneID:4340306| Length = 3317 bp| Definition ...")
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Gene Name

Os06g0180000

Description

Conserved hypothetical protein

Version

NM_001063509.1 GI:115466749 GeneID:4340306

Length

3317 bp

Definition

Oryza sativa Japonica Group Os06g0180000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3965108..3968424

Sequence Coding Region

3965642..3965713,3966255..3966368,3966450..3966521,3966614..3966683,3966794..3966891
,3966977..3967178,3967260..3967327,3968146..3968301

Expression

GEO Profiles:Os06g0180000

Genome Context

<gbrowseImage1> name=NC_008399:3965108..3968424 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:3965108..3968424 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtactactggttcaagcgggcgcgtgaggccggcggcggcggaggcgccgagatgggcgggttcaccaggatcctccactccgggaagcccgacgcgttcgtcgacgagatccccaccttcgtcgccgacccgctccccgctggcacggatcagggatacgttgttctcaatagaccttgggcatttgttcagtggcttcaaaaggcagacatacaagaagaatatatcttgatggcagaaccagatcatcttattgtcaaacctataccgaatttatcaagggatggtcgttcagcagctttccctttcttctacattgagcccaaaaaatatgaaaatgtgctgcgtaagttcttccctgaacatgaaggaccaataaccaaaattgatcctattggaaattcccctgtcatcgcaagaaaggaatctcttgcaagaattgctccaacttggatgaatatttcaatagcaatgaagaaagatcctgaaacagataaagcttttggctgggttcttgaaatgtatgcttatgccgtagcatccgctctccatggagtgggtaacatcttacataaggaatttatgattcagccaccatgggacttggaaattggtgatgcatttatcatacattatacttatgggtgtgactatgatatgaagggtaaactcacttatggcaaaattggagaatggagatttgacaaaagatcctatgatagtaaacctcctcctagaaatttgccattgcctccaaatggtgtacctcaaagcgtggtgacacttgtgaaaatggttaatgaagcaacagccaacatacccaactgggattcttatgcagctgcatag</cdnaseq>

Protein Sequence

<aaseq>MYYWFKRAREAGGGGGAEMGGFTRILHSGKPDAFVDEIPTFVAD PLPAGTDQGYVVLNRPWAFVQWLQKADIQEEYILMAEPDHLIVKPIPNLSRDGRSAAF PFFYIEPKKYENVLRKFFPEHEGPITKIDPIGNSPVIARKESLARIAPTWMNISIAMK KDPETDKAFGWVLEMYAYAVASALHGVGNILHKEFMIQPPWDLEIGDAFIIHYTYGCD YDMKGKLTYGKIGEWRFDKRSYDSKPPPRNLPLPPNGVPQSVVTLVKMVNEATANIPN WDSYAAA</aaseq>

Gene Sequence

<dnaseqindica>2712..2783#2057..2170#1904..1975#1742..1811#1534..1631#1247..1448#1098..1165#124..279#gcctccttccccggcgccaccgcctcccgccgcctcgcctcgggccgcccgacggcggcggcggcgttccacaccgcggtcaccgcgtcgggctccctctacaacacgtggcagtgccgggtcatgtactactggttcaagcgggcgcgtgaggccggcggcggcggaggcgccgagatgggcgggttcaccaggatcctccactccgggaagcccgacgcgttcgtcgacgagatccccaccttcgtcgccgacccgctccccgctggcacggatcaggtaccgcgttcgtctctgctggttggtggtgaaacttgcagattgttactaccaatttgatcgctgcgttcttggtctttcgttacttgttcgttgcaattctggaaaaaatgtgggttcctcatagaaattagtaactgaaatcgagaaattccaaacatgtggacttccgtgaatttgtggatcatgtggaatcaatgtggcattgtgtgaattttgttgacatttcattccgtgcacgcaagctaatccccatatatgagagtagttgaatagcgctattagacatttcagccttttcttgtgaggatacagtataccaaacatgtggaaatgcgagtgctaaggaaggcccagttgatggaaaaagactgagacttgcagttgcagctaggatctcacgtgatgaaaaggtttaagcatgatttggttccatctcgtgcctgccttttttatcatgataacgtataaagcaagataatatgctaataatcctgtgtgctgtagctgtctgattgtagtgtcctatgctgaaatttaaccgtaacttttttttcgccgggaaggctgaaggaggttgtccgaatgtattaagaaggagaaaaaatttaaccgtaactgttctggctatatagcttataccctgtccatcttttaaccaaaaaaaactagcatgctgatgaatcaataatttagcagaaacttagtactaaaacggatgttattgttccaattgtttttgtcttttatgaggtgaagtgttccgtagatgctggtttgaatttttgtccttgacggagttcatgcttacatctcagggatacgttgttctcaatagaccttgggcatttgttcagtggcttcaaaaggcagacatacaagaagagtaagtttggtaggtttatatgagaagcacggcttagtctaaagtttcaatactttagttgactttcataatgttttacagatatatcttgatggcagaaccagatcatcttattgtcaaacctataccgaatttatcaagggatggtcgttcagcagctttccctttcttctacattgagcccaaaaaatatgaaaatgtgctgcgtaagttcttccctgaacatgaaggaccaataaccaaaattgatcctattggaaattcccctgtcatcgcaagaaaggtaatttgtttccctctgcgatatattgtgatcacctacacataacaacgcaatttattgatttatgtttttcctgatttcctaggaatctcttgcaagaattgctccaacttggatgaatatttcaatagcaatgaagaaagatcctgaaacagataaagcttttggctgggttcttgaaatgtaattcctgccattcagtttcttagttcccaattccttccaggctttcagcctggctctgttatgcattccaaatctaatatttctgtggtctcatttgtggaaaataggtatgcttatgccgtagcatccgctctccatggagtgggtaacatcttacataaggaatttatgattcaggtctgatgctcagttaattagcatgtcatcatgtgtattggatagtgtgtgcaatcctctcctgagctgataatattgtcctgttgttttagccaccatgggacttggaaattggtgatgcatttatcatacattatacttatgggtgtgactatgatatgaaggtaatcgttctccttttgatgtggagtttcagtaactgtatctggtagtttcctgttttaaccatatcttttgtgcactagggtaaactcacttatggcaaaattggagaatggagatttgacaaaagatcctatgatagtaaacctcctcctagaaatttgccattgcctccaaatggtgtacctcaaagcgtggtatggttcagctctctatgcagatatctaatcttaagtttgcatcttgagtaccttctttcttcgtctcttaaatggacattaattttattatcttttgtactgcttgattattttttgtgtgaaccatatcttctttagtatattcaaccttgcaagaaaaagtttgattatgaaagacaatgcaccatacaagtacatggaagtcaaaatagaaaaaaagggctaaattgatataaataccagtgttgcaatgcgaatcattgatgcattgagacagtaatgggtattaacaagtaattcaatatgatgcattggcatttgtgaatgtcctgtcagaataaaatgaaaggtattttacttgtctgaaacggctgcaggtttcttgagatcacttcattagaataaccttgcttgataattcttctccatcaagctaatgcatactgcacagagtacagcccttgtttgctttgtatatatccttttttttctttggaatggtgactaatccatatcatggaatttgtgttggccacaggtgacacttgtgaaaatggttaatgaagcaacagccaacatacccaactgggattcttatgcagctgcatagctgattcaccttgttacaatctgatggttggttcgtcaattgtgtgggcctaattttccaagcaaagttaatgcatgataactggccaagcctagaagtgggtggatgacaaagcgggatgcatatagctgtacaagttaatccagggccattgacaccattcaattctgcttgaattttccagcagacagaaaccaagttagtgcaaagcaaccccttctttaactgaaagtctgaaacacacaaactacgatcaataaactcagtgtttattgcaatgtaagtgagtgatgagttagaactggtgagttctggttcggagcctgaatcctgacttcattctgattttctccttcagtgaagtcaagcatagattgatctttatacgagacaagtagaaaatcaaacactgtagttgctttttttttcccaattggagtccacctgtgccaactgccaatgcataattaggtttgatgaatattgtaactgtgtctcttttattctctaaataaaaaggaatatagcttcttt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0180000, RefSeq:Os06g0180000