Os06g0181500

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Revision as of 09:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0181500| Description = Similar to Plasma membrane H+-ATPase (EC 3.6.1.3)| Version = NM_001063515.1 GI:115466761 GeneID:4340312| Length = 48...")
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Gene Name

Os06g0181500

Description

Similar to Plasma membrane H+-ATPase (EC 3.6.1.3)

Version

NM_001063515.1 GI:115466761 GeneID:4340312

Length

4846 bp

Definition

Oryza sativa Japonica Group Os06g0181500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:4024531..4029376

Sequence Coding Region

4025138..4025140,4026538..4029063,4029148..4029198

Expression

GEO Profiles:Os06g0181500

Genome Context

<gbrowseImage1> name=NC_008399:4024531..4029376 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:4024531..4029376 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcctccctctccctcgacgacatcaacgacgactccgtcgacctgtcgaaggcgccggtggcggaggtgttccagaagctgaaatgcgaccggaaggggctcaccggagcggagggagagagccggctgcggctgtacgggccgaacaagctggaggagaagaaggagagcaagcttctcaagttcttgggcttcatgtggaacccgctgtcgtgggtcatggagatcgccgccatcatggccatcgtcctcgccaacggcggcggccgcccgcccgactggcaggacttcgtcgggatcgtctccctgctcatcatcaactccaccatctcctacatcgaggaggccaacgccggcgacgccgccgccgcgctcatggccggcctggctcccaagaccaagctgctcagggatggcaggtgggaggagcaggaggcggcgatcttggtccccggcgacatcatcagcatcaagctcggcgacatcatccccgccgacgcgaggctgctcgagggcgacccgctcaagatcgaccagtcggcgctcaccggcgagtcgttgccggtgaacaagcacccggggcaggaggtgttctcgggctccacggtgaagcagggcgagatcgaggccgtcgtcatcgccaccggcgtgcgcaccttcttcggcaaggcggcgcacctcgtcgacagcaccaacaacgtcggccacttccagcaggtgctcaccgccatcggcaacttctgcatcatctccatcggcgccggcatggcggtcgaggtgctcgtcatgtacccgatccagcaccgcgcctaccgcgacggcatcgacaacctcctcgtcctcctcatcggcggcatccccatcgccatgcccaccgtgctctccgtcaccatggccatcggctcccaccggctgtcgcagcagggcgccatcaccaagcgcatgacggccatcgaggagatggccggcatggacgtgctctgcagcgacaagaccggcacgctcacgctcaacaagctcaccgtcgacaagaccctcatcgaggtgtgctccaagggcgtcgacaaggacatggtcctcctctacgccgccagggcgtcgcgcgtcgagaaccaggacgccattgacacctgcatcgtgaacatgctcgacgaccccaaggaggcacgcgcggggatccaggaggtgcacttcctccccttcaaccccgtcgacaagcgcaccgccatcacctacatcgacggcaatggcgactggcacagggtgagcaagggcgcgccggagcagatcatcgagctctgcaacatggccgccgacgccgagaagaaggtccacgccctgatcgacagctacgccgaccgggggctccggtcgctcggcgtgtcgtaccagcaggtgccggagaagagcaaggacagcggcggcgacccgtggcagttcatcgggctgctgccgctgttcgacccgccgaggcacgacagcgcggagaccatccgccgcgcgctccacctcggcgtcaacgtcaagatgatcaccggcgaccagctcgccatcgccaaggagacggggcggcggctcgggatgggcaccaacatgtacccgtcgaccaccctcctcggcgacaagaacagccaggtgaacggcctccccatcgacgagctgatcgagcgcgccgacgggttcgccggcgtgttcccggagcacaagtacgagatcgtgaagcggctgcaggagatgagccacatctgcggcatgaccggcgacggcgtgaacgacgcgccggcgctgaagaaggcggacatcgggatcgccgtggacgacgccacggacgccgcccggagcgcgtcggacatcgtgctgacggagcccgggctgagcgtgatcgtcagcgcggtgctcacctcccgcgccatcttccagcggatgaagaactacaccatctacgcggtgtccatcaccatccgcatcgtcctcggcttcctcctcatcgccatcatctggaagttcgacttcgccccgttcatggtgctcatcatcgccatcctcaacgacggcaccatcatgaccatctccaaggatcgcgtcaagccgtcgccgacgcccgattgttggaagctcaacgagatcttcctcacgggggtggtgctcggcacctacatggcattggtcaccgtgctcttcttctacctcgcgcacgacacgaacttcttcacggatgtgttcggggtgacgtcgatcagggagagcgagagggagctcatggcggcgctgtacctgcaggtgagcatcatcagccaggcgctcatcttcgtgacgaggtcgaggagctggtcgttcgtcgagaggcccgggttcttgctgctcttcgccttcttcgctgcgcagatggtggcgacggcgatcgccgtgtacgcgcgctgggatttctgccggatccagggcatcgggtggcggtggggcggcgccgtgtggcagttcagcgtcgtcacctacctcccgctcgacgtcctcaagttcatcatccgctacgccctcaccggcggcaaggccggggacagcgcccagaaaaagtga</cdnaseq>

Protein Sequence

<aaseq>MASSLSLDDINDDSVDLSKAPVAEVFQKLKCDRKGLTGAEGESR LRLYGPNKLEEKKESKLLKFLGFMWNPLSWVMEIAAIMAIVLANGGGRPPDWQDFVGI VSLLIINSTISYIEEANAGDAAAALMAGLAPKTKLLRDGRWEEQEAAILVPGDIISIK LGDIIPADARLLEGDPLKIDQSALTGESLPVNKHPGQEVFSGSTVKQGEIEAVVIATG VRTFFGKAAHLVDSTNNVGHFQQVLTAIGNFCIISIGAGMAVEVLVMYPIQHRAYRDG IDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKT GTLTLNKLTVDKTLIEVCSKGVDKDMVLLYAARASRVENQDAIDTCIVNMLDDPKEAR AGIQEVHFLPFNPVDKRTAITYIDGNGDWHRVSKGAPEQIIELCNMAADAEKKVHALI DSYADRGLRSLGVSYQQVPEKSKDSGGDPWQFIGLLPLFDPPRHDSAETIRRALHLGV NVKMITGDQLAIAKETGRRLGMGTNMYPSTTLLGDKNSQVNGLPIDELIERADGFAGV FPEHKYEIVKRLQEMSHICGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIVLTE PGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIAIIWKFDFAPFMVLIIA ILNDGTIMTISKDRVKPSPTPDCWKLNEIFLTGVVLGTYMALVTVLFFYLAHDTNFFT DVFGVTSIRESERELMAALYLQVSIISQALIFVTRSRSWSFVERPGFLLLFAFFAAQM VATAIAVYARWDFCRIQGIGWRWGGAVWQFSVVTYLPLDVLKFIIRYALTGGKAGDSA QKK</aaseq>

Gene Sequence

<dnaseqindica>4237..4239#314..2839#179..229#gtcttccgccccgccccgcccctcccctccacccacgcggagaaggagaggaggagaggagaggagagagggaggcagcagctcgcccgccgccgcccctccctccgtgcccgcgccgcccaccccgccgccgggcaccggccaccatcgtcttcatcatcttcccaataaaccccccatggcgtcctccctctccctcgacgacatcaacgacgactccgtcgacctggtacgcacgcacgcacgccatgtgttcgtccatcgtcctcctcctcgtcagcgtctaatgttgtgtaaatgttgtgatgtgcagtcgaaggcgccggtggcggaggtgttccagaagctgaaatgcgaccggaaggggctcaccggagcggagggagagagccggctgcggctgtacgggccgaacaagctggaggagaagaaggagagcaagcttctcaagttcttgggcttcatgtggaacccgctgtcgtgggtcatggagatcgccgccatcatggccatcgtcctcgccaacggcggcggccgcccgcccgactggcaggacttcgtcgggatcgtctccctgctcatcatcaactccaccatctcctacatcgaggaggccaacgccggcgacgccgccgccgcgctcatggccggcctggctcccaagaccaagctgctcagggatggcaggtgggaggagcaggaggcggcgatcttggtccccggcgacatcatcagcatcaagctcggcgacatcatccccgccgacgcgaggctgctcgagggcgacccgctcaagatcgaccagtcggcgctcaccggcgagtcgttgccggtgaacaagcacccggggcaggaggtgttctcgggctccacggtgaagcagggcgagatcgaggccgtcgtcatcgccaccggcgtgcgcaccttcttcggcaaggcggcgcacctcgtcgacagcaccaacaacgtcggccacttccagcaggtgctcaccgccatcggcaacttctgcatcatctccatcggcgccggcatggcggtcgaggtgctcgtcatgtacccgatccagcaccgcgcctaccgcgacggcatcgacaacctcctcgtcctcctcatcggcggcatccccatcgccatgcccaccgtgctctccgtcaccatggccatcggctcccaccggctgtcgcagcagggcgccatcaccaagcgcatgacggccatcgaggagatggccggcatggacgtgctctgcagcgacaagaccggcacgctcacgctcaacaagctcaccgtcgacaagaccctcatcgaggtgtgctccaagggcgtcgacaaggacatggtcctcctctacgccgccagggcgtcgcgcgtcgagaaccaggacgccattgacacctgcatcgtgaacatgctcgacgaccccaaggaggcacgcgcggggatccaggaggtgcacttcctccccttcaaccccgtcgacaagcgcaccgccatcacctacatcgacggcaatggcgactggcacagggtgagcaagggcgcgccggagcagatcatcgagctctgcaacatggccgccgacgccgagaagaaggtccacgccctgatcgacagctacgccgaccgggggctccggtcgctcggcgtgtcgtaccagcaggtgccggagaagagcaaggacagcggcggcgacccgtggcagttcatcgggctgctgccgctgttcgacccgccgaggcacgacagcgcggagaccatccgccgcgcgctccacctcggcgtcaacgtcaagatgatcaccggcgaccagctcgccatcgccaaggagacggggcggcggctcgggatgggcaccaacatgtacccgtcgaccaccctcctcggcgacaagaacagccaggtgaacggcctccccatcgacgagctgatcgagcgcgccgacgggttcgccggcgtgttcccggagcacaagtacgagatcgtgaagcggctgcaggagatgagccacatctgcggcatgaccggcgacggcgtgaacgacgcgccggcgctgaagaaggcggacatcgggatcgccgtggacgacgccacggacgccgcccggagcgcgtcggacatcgtgctgacggagcccgggctgagcgtgatcgtcagcgcggtgctcacctcccgcgccatcttccagcggatgaagaactacaccatctacgcggtgtccatcaccatccgcatcgtcctcggcttcctcctcatcgccatcatctggaagttcgacttcgccccgttcatggtgctcatcatcgccatcctcaacgacggcaccatcatgaccatctccaaggatcgcgtcaagccgtcgccgacgcccgattgttggaagctcaacgagatcttcctcacgggggtggtgctcggcacctacatggcattggtcaccgtgctcttcttctacctcgcgcacgacacgaacttcttcacggatgtgttcggggtgacgtcgatcagggagagcgagagggagctcatggcggcgctgtacctgcaggtgagcatcatcagccaggcgctcatcttcgtgacgaggtcgaggagctggtcgttcgtcgagaggcccgggttcttgctgctcttcgccttcttcgctgcgcagatggtggcgacggcgatcgccgtgtacgcgcgctgggatttctgccggatccagggcatcgggtggcggtggggcggcgccgtgtggcagttcagcgtcgtcacctacctcccgctcgacgtcctcaagttcatcatccgctacgccctcaccggcggcaaggccggggacagcgcccagaaaaaggcaagctcgccgccgccgacctctcaaccttagatagacttggagatggattttttctttcttttttttttcctcgagaggggaggggaggatatccccctcgtcttatgtatgtatgatgtttaaaaggttattaaaaaatttgaaaaaaatatttagtaagatagatcaatatatgatatgttattctataaacatgtaaattcgaattcgacttttataattagaaacgaaaaaaactgactacgaattacgtgttatatttagagtcgaatttattattttttaagtaaatttcacaaaactacatatacttaggctaaattattagaactacatgtaaagtgatgtatcacaaagttacagatttaacaataaatttatcacgaaactacatgtcgtaaaactatagatttaattataaaattatcacaaaactatatattttggagttcaaatctttaattctagtgctatgttatagttataaatgtccaagttttatgtttaaattgatattactttctccgtttcacaatgtaagactttctagcattgttcatattcatttagatgctaatgaatctaaagatatacatatgtctagattcattaacgtctatatgtatatgggcaatgttagaaagtcttacgttgtgaaacggagggagtacatttgtagtttatgataacttttttgctaaaatctgtagttttacaatatttcaccttaaatctttagtagtgtaataattttagtggtaatttgatgcatcatattaaatatatagttttataataatttgaccaaaaattacccatgattttatgaaatttactctattttttcttcttctagttatgtaagttgaatttgaacatacattttatgaagtgacatgtcacatattgatctatctagctgattttttaaaagaatctttgctaactttttaagcgacgcgaaaaaaacgagaggacctttcctgaaggaatgaatattgtttcgtagatggattctaatcacttgggtggatgtccacccgtttattatatgtcaactaaatgattatgaaaaaattcaaaaaaattgacaagatatatctatatgtagtatatcactccacatacatgtaagttcaaattcaacatctacaagttgtaacaaaaataacaacttgtaaaagttgaattttaaattgcatgtttgtggagtgatatattacatattgatctatcatgttttttttttaaattttttcataactatttagaacacgtgcaagatgtccaccgggtgattaaaagagttcccctatcgtttcctgtagttttcgccatgattgttgtgaacgctattgatgatgatggttgtgtgtggcgtgcgtcgtctccagtgagggaatcctgggtgtttgtctcgcgcacacggcgttcacgacacaaggaggaggagctcacccagccccgccgccgcaaccgccgccgccgccgccgtctccgacctcctcgccgccggtaaggaggagctctccgagcaggccgccaagcgcgccgaggtcgcaaggtatataggcaaacccttcgaaaaccttaacccatgcatcctctcctccggccggccggacaccggccggctggccggagacggagaagacgacgactgagccggcggctgttgcatgtattgcagatcgactcggtggtgaagctgaacgccggtggccggagagcttgttcatgttgccgtaagcgtacgtctcgtgtttgcgtggttttgagcgggaatgagcttgtgagaaaaacaaaaaaaacaaaaaaaattcagtccatctgctggtatatacatatttcatctgttcagtttttcagtacatatatcttgtcaactgtgtatatttgtgcatgtctatatataccctatatacaagtgttcagttgaaatttgcaaattgtgtagatatactccctctgttttttaatagatgacgccgttgactttttctc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0181500, RefSeq:Os06g0181500