Os06g0182400

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Revision as of 09:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0182400| Description = Metallophosphoesterase domain containing protein| Version = NM_001063519.1 GI:115466769 GeneID:4340316| Length = 413...")
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Gene Name

Os06g0182400

Description

Metallophosphoesterase domain containing protein

Version

NM_001063519.1 GI:115466769 GeneID:4340316

Length

4137 bp

Definition

Oryza sativa Japonica Group Os06g0182400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:4086971..4091107

Sequence Coding Region

4087114..4087170,4087982..4088032,4088335..4088356,4088471..4088585,4088680..4088712
,4089221..4089346,4090226..4090332,4090422..4090493,4090568..4090962

Expression

GEO Profiles:Os06g0182400

Genome Context

<gbrowseImage1> name=NC_008399:4086971..4091107 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:4086971..4091107 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccagcgccggcgtcggacgcggccgggtccgcgtcgcggtcgtcggcgacgtgcataatgattggacccttgaggaagactcaaaagccctacattttctccagccagatttggtactttttacaggtgattatggcaacgagaatgttcaacttgttaaaagcatttcagatcttcagctccccaaagcagctattcttgggaatcatgactgttggcacacgtatcagttttcagagaagaaggtagatcgtgtccagcttcagctagagagccttggtgagcagcatgttgggtacaaatgtttggattttccaacaataaagctgagtgttgttggtggacgaccattttcctgcgggggtaataggatatttagaccaaagcttctgtcaaaatggtatggtgtcaatgatatggctgaaagtgcaaagaggatatatgatgctgctacaaatgcaccaaaggagcatgctgtcatattactggcacacaatgggccaacaggtctaggctcaagaatggaggatatttgtgggcgggattgggttgctggtggtggtgatcatggtgatccagatctggagcaagccatatctgatctgcaaagagaaaccggagtttcgataccgctggtcgtgttcggtcacatgcacaagagcctcgcctacgggagaggccttcggaagatgattgcctttggagctaaccggactatatatctgaacggcgccgttgtgcctagagtgaatcatgcgcaatcaagcaggcagcctgcaatctccacaagcgaaaagactgggctcgaaggattaacaggactgatggttccgacatcgcgggcgttcaccattgttgatctctttgaaggcgccgttgagaaaatctccgaggtctgggtgacggtgggtgatgccaggacggagcttgagcaggaattagtcttgtacaagcaaccacgtgagcacatatga</cdnaseq>

Protein Sequence

<aaseq>MASAGVGRGRVRVAVVGDVHNDWTLEEDSKALHFLQPDLVLFTG DYGNENVQLVKSISDLQLPKAAILGNHDCWHTYQFSEKKVDRVQLQLESLGEQHVGYK CLDFPTIKLSVVGGRPFSCGGNRIFRPKLLSKWYGVNDMAESAKRIYDAATNAPKEHA VILLAHNGPTGLGSRMEDICGRDWVAGGGDHGDPDLEQAISDLQRETGVSIPLVVFGH MHKSLAYGRGLRKMIAFGANRTIYLNGAVVPRVNHAQSSRQPAISTSEKTGLEGLTGL MVPTSRAFTIVDLFEGAVEKISEVWVTVGDARTELEQELVLYKQPREHI</aaseq>

Gene Sequence

<dnaseqindica>144..200#1012..1062#1365..1386#1501..1615#1710..1742#2251..2376#3256..3362#3452..3523#3598..3992#gctcctcccctcccactccgtcgtggccggcagcgggagcagccgctgcctcctccgccgccgccgccgccgccgcgcgcgcctccgcgaatcctcttcctcctcctctctcctcgccgccgcccaggcccagccgcaggagcatggccagcgccggcgtcggacgcggccgggtccgcgtcgcggtcgtcggcgacgtggtaaccccctccttgccctcttcctccgtctcttctttgcggcgtgcctgggatgggggataggccagacatgggtgctggtgtggccttgcgattctcggtgggtttcgtgtggcgtagcataggggattcggagtgagagggagatggctttggggacggaagcattctaccaattcccgcccccccccccccccccaaaaaaaaaataaaaaaagaagaaaaaaactgaggcatctatacttgttgactttcttagctcagtttagctccgatcttgagatgctgtgagaggagtgcatgatgagtgtgattcatcactgtggctgtgtgggggtttgcgtttaaggtggcgtttgattgtagtagtagtagtttggatggaggtgaatttggtggtgcgaagaggttcatgagggataaagctttgacttccatctgaagggacaaatgcagagatagtttttttttgtgaactacaatgtgaaaagccaaaactgtaaaatgtcttcttggagagaagatgcagggagtgagattttagcggagtgacaacatattgtggcttgaaccagtcactaggatagtgtgttttgataccatgctttgttgatcttgtgggtttgaaatctcttagctcgctttcctgtcgagatgtgctttacttcttgtactaagaggaatatgatggcttttactttatttgcatgcttgacttggttataacatcaattatggctcaagggattataatatcctcttgatgagaacaatgcactaattggctgttgtgatgtgctgaacattgcagcataatgattggacccttgaggaagactcaaaagccctacattttctccaggtattgcaaatccagataaattcagtcaattgtatctgtgtattgcattaagttattcacatctgattattgtagcatgtctctagttttatgatgtaagatcatctgaagtgcagtctgtccttttctttattcatgttctacgcctttttgtatgcctgccatcaacatgtactgatgtacagtccagctgccaaaatgacactggagtttgatagaaaaatatccgtactacatttattttctataacattatgtttcttattcccagaagatctaactttctctccgtgtgaatgcagccagatttggtactttttacaggtgcgccctttgccctattatatctgtactacataatatactcgttactttgtgaagttacacttaaatgcttattccttacatctcctgtttgctgtcctccatttatggcaggtgattatggcaacgagaatgttcaacttgttaaaagcatttcagatcttcagctccccaaagcagctattcttgggaatcatgactgttggcacacgtatcagttttcagagaagtaagaataattctttcatccaacaaggatagtgttcaacataaatgcactgatatttgatgaaatgatgaatgtatccttggttggcattcaggaaggtagatcgtgtccagcttcagctagagaggtaagatgttcctcctttaatgtgaatatgcttttatgtttaatacaacagtgttatgattaacactagcatttgatgaatttctattgtaagaaatgccaatgaatgggttatatgagttgcacaattgttgttattttgaaggaaaacttgcattatttaaagttgtttcagttgcaccagagcactaaacaggtattactttgatttttagcattgttgctaggtcatttcatgatttgcatctcttttttttttgaaagaaataaaagaagctgatactgcacttaaatccaagaagaagtgagttgtttaaaactgtgctagtaattgctggaaaaaatgtgattctcaggaaattttggcctgattattccatgatttttaataagctgtggcaattcaggatgattctgggttataacttgtcttcaccagactctggtactatttttgcagaccttgcggcaagtaattttctgttgttattttttgttgccaatttcagccttggtgagcagcatgttgggtacaaatgtttggattttccaacaataaagctgagtgttgttggtggacgaccattttcctgcgggggtaataggatatttagaccaaagcttctgtcaaaatggttggtaagagacatgctaaccaatagatacacatgtttatcagttttctttggtatatacttctccttactaaggagtccttagttgtcctttctttttcatgaaacagtagaagagggctctactgaaaaaatactactgctatttataatagatttatgtaaaatagacctaatgatccacagtatccaaaaaatagttacaaggttcatgtgaaacatgcagtaatttaggtaaggcataagagaaatgagttgcagcatacttttcctaaagatactagtttggtatatccttgtcattttggtctacaagtcatttttaccttcccttcttttcatattgaattaagaagcaaacgatgtatgtgaactcgtgaaatgatgggtgaatggcacaataaacagtagagttaccaacttatacttcgttctcatctgtagcactactgtattaggtagtgaatattttagagtttgatgatatatattgttgatagctgtcattcttagttgcttcaccgggttggtttcttattgcatactacttctgctgtgtagtaacatgcagtgaaatcgagctacagtggtaaggatattggtggagtaggtgattatgctttgacctgattcttgtcgatcagcgcagtatatattggtaatgataaaataaacatagcacactgtaataagaagtgtgaagctatagtaaattattattttggtggtgtagtcagggatggttagtccacctcgtaaaacaaagtgcataagacagacacaatactgctacctttttttacttggtgaactcttactcttgttcataattggaaacttgtctaccattgtttatttgatcctacgattattatgtaggtatggtgtcaatgatatggctgaaagtgcaaagaggatatatgatgctgctacaaatgcaccaaaggagcatgctgtcatattactggcacacaatgggccaacaggtgtctgaacgtttaaactagcaaactacatatacttgcacttgcacacatatgctgtaacatgcctacattaaattatggttacacaggtctaggctcaagaatggaggatatttgtgggcgggattgggttgctggtggtggtgatcatggtgatccaggtctgatattccatcgatgatacttccacttgtacagttgcttaatacgccatcttagacaagaacctccgcagatctggagcaagccatatctgatctgcaaagagaaaccggagtttcgataccgctggtcgtgttcggtcacatgcacaagagcctcgcctacgggagaggccttcggaagatgattgcctttggagctaaccggactatatatctgaacggcgccgttgtgcctagagtgaatcatgcgcaatcaagcaggcagcctgcaatctccacaagcgaaaagactgggctcgaaggattaacaggactgatggttccgacatcgcgggcgttcaccattgttgatctctttgaaggcgccgttgagaaaatctccgaggtctgggtgacggtgggtgatgccaggacggagcttgagcaggaattagtcttgtacaagcaaccacgtgagcacatatgacttccacaaactggtaccgaaactaagtactccgtacatgaatgtaaatgtgatactagtatgatccgaatttcgcaatacagagaagtacaaaacgcactgtcaaaatgtccgtggagtgaagtaatgcaatgtaaattcgctg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0182400, RefSeq:Os06g0182400