Os06g0186500

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Revision as of 09:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0186500| Description = The start codon is not identified.| Version = NM_001063545.2 GI:297605329 GeneID:4340345| Length = 4758 bp| Definit...")
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Gene Name

Os06g0186500

Description

The start codon is not identified.

Version

NM_001063545.2 GI:297605329 GeneID:4340345

Length

4758 bp

Definition

Oryza sativa Japonica Group Os06g0186500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:4365078..4369835

Sequence Coding Region

4365078..4365182,4365274..4365358,4365493..4365553,4365878..4366009,4366108..4366240

Expression

GEO Profiles:Os06g0186500

Genome Context

<gbrowseImage1> name=NC_008399:4365078..4369835 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:4365078..4369835 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gatgaaagtatatacttagcatattcagacttccacccttatgttgttggagacttggcttgtacaaaggagctgaaccgctggttctcgaagcaatttgagaaggggccatttcgacttgttgctgaggaagggaagtccaaatgttcctgggttagtcttgacgacatcaccaatggcttgataagaggagattctgaaaaatcacatcatcaccagcgtgtggctgaattgcaacgacttcgttcaatatttgctacaagtgaaagacagtggattgaggcacaagttgaaaatgctaaacaacaggccatactctcgattttaaaatcacaagtgtcatctgacgaggctcatatacatagggatattcattctcttaggagaaaaggttctgagcttgctggagaactctcgactctttctcaaaaagtacaggcttttgtatctgaggtatgctctacccatgtagaggcactgccttttcttgcaaaatacttacattatattccctag</cdnaseq>

Protein Sequence

<aaseq>DESIYLAYSDFHPYVVGDLACTKELNRWFSKQFEKGPFRLVAEE GKSKCSWVSLDDITNGLIRGDSEKSHHHQRVAELQRLRSIFATSERQWIEAQVENAKQ QAILSILKSQVSSDEAHIHRDIHSLRRKGSELAGELSTLSQKVQAFVSEVCSTHVEAL PFLAKYLHYIP</aaseq>

Gene Sequence

<dnaseqindica>1..105#197..281#416..476#801..932#1031..1163#gatgaaagtatatacttagcatattcagacttccacccttatgttgttggagacttggcttgtacaaaggagctgaaccgctggttctcgaagcaatttgagaaggtaggttctctttggctgtcatgttattctcagcttacttatttatttaacacttattctgcttacttatttatttaacactttctgtcaggggccatttcgacttgttgctgaggaagggaagtccaaatgttcctgggttagtcttgacgacatcaccaatggcttgataagaggtaaataccagttatagtaaattgtatgcaatgaatagattgattatattatttaaagagcgtaactctgatcctagattagtatgatgtgctttgaatgaactaattatgaaaaactcattcctattatgcaggagattctgaaaaatcacatcatcaccagcgtgtggctgaattgcaacgacttcgttcaatgtaactatcccttgatttatcgcttatccaaagttccaaacctttctgtttgaacatatcatagtttttttttttaccatgaaacagaaggggaatcctctatgttgaacacatcatagttgctaatgtttcatgcaatcttgttatatggtgcctattgagatattcaagtgattttatttttcttcctattgcacttctttttgcatcagtctgctggaattttgtcattgtgctatcctcttatatgtctagaatttgctttatatctttgtggtgattctaatgaccttgaactgtaaacttgctctaatttgggaacagatttgctacaagtgaaagacagtggattgaggcacaagttgaaaatgctaaacaacaggccatactctcgattttaaaatcacaagtgtcatctgacgaggctcatatacatagggatattcattctcttaggtatacattcgttactgttcatcactattattttatcagaataactgaaacgaagaaaagatagatcaattacattctccgtatcttatttattttaggagaaaaggttctgagcttgctggagaactctcgactctttctcaaaaagtacaggcttttgtatctgaggtatgctctacccatgtagaggcactgccttttcttgcaaaatacttacattatattccctagttacaaaaattggcacttcatgagtctgtttagctggatgcatatgggtttgcctgtcaattgatgaaatgtatatggttttcgacagagttttcatcaacgtaatgccacatccatttaataccataagggttgaattgcatacttgcatctggtaggatttaatgattcattgcagattaaattcctatttcagaagaaaaagtgttccaagcactgtcataaaatagctttcagttgtgaaatctctaaaccacgggcagctagaaattataatctgttatgcagatattagctttgttctgctataagttctcaggaaaaagaaaaacactcatcacttataagatactttcagcacttagaggataatatgccaatagtaattcttactgcagtgcatcagacatacttcttttagcatatggttaaaattttcccgagataggcttgtttttcccagtattcactcgttctccccctccagactataccatgcctctgctcagaactcgctcaacttcaaggcacatatattttgcaaggtttgttgatgatatttacattactttcgctggcttacatgattctgttgtatcatttccttgatattctagcattcaaatatgtaggggactacgatttaaaggtcatgcgccaggaatactacattaacaggcaaaaaacggtatgcacattcatcacatggtatatatgtcatgtacacttatttattgtcagcagttcctttgtttgcttattggtggtatcttctataatgttatgaaagtttataatcgagataactattcagatagtgttattacctatttttccttctgccttcaaatctatgggtggtaagacacttgcaccaaatagcctagggggccaaatattcttgtgacaaactttcaatgtttagatttagttggcccctgggagtattcattagaaaatctggttgttctacaccttgttgaccctatttgtttttcgtatacactcagaagacaaatttaagtgatcagtgaaaaatgtgctgctagcttgcaccaatacatgctgagatcaccttaagccagctacttttgcatttgatggaacagtgttttacatttttctgccaaggtcatacatactgccaggcatatgattgttttattacacatccttctgattctgcactgtcttcattctgcagttcatcagtcacttggctaatcagctagccagacaccagtttctgaagattgcttgccagcttgaaaggaaaaacatagctagcgcctattcactgcttagagtaatagaatccgagttgcaaagctacctatcagctgtcaatacccgtttggtaagcaatctcatttgttgagaacctcctatgttgtcatttcttcttttttatgtgtctacatgtttcatgctacactcggtagtttttgttcaatctgcccttcttagttttccaagaaatgattcttagttgacctaacaaagaaatgttttttttaattctttagggccattgtacttcattaattcaagctgcgaccgaggtgcgtgagcaaggtgcaattgatgaccgtgacactctcctccatgccgtacgggatctcttatgtgttcactcaagtaagctgacaagtgacaactctactcagatagctgtttgaacgttttaatttcgatattcaatgtttcatgtcacttctgtagatgtccaagcaacaatgccaacatacatgtcagcgcatgccttggttcagcagatatcagcccttcaatctgatttgctttctcttcagtctgaacttgaaagtgctctgccagccgatcgcaaaagatgtatcaatgaactgtaagtgatactatagctcacactatgtctaaatatcagttgcctttactttatctcctgcctgaaatacgcaaaatcaaatttttgaattgttgcttttagtgtttcttctgatctaagcaaacctacccacattcttggtttagtgaatagaacagtagtgtcccatgttgttaaggcggtaaggcatcctaactcctggcagtccataggcagtatggtaaggtgggccagacgccattactcctggcagcgccttacagccatagcgacgctatggtgatgccttgataaccatgagtgcgtcaactgtgactgactctgaggtcctcatgtataatcaagttgaatattgagacaaccatgagtgcgtcaactgtcactgactctgaggtcctcatgtataatcaagttgaatattgagacagatgatacttttcaagtttgcaacggatctttggttggtacggtttgcttgttggcttaactttgcgtcttcacctatacatgatgaactgttgtctcagccccctcatctactgctcaaatataaatttccttttagctggtggtggtgaatcttccacggtgccaccaatcctctacattacattttctaaaaactagcccctacagtttttagcattacggattatagtccatttatatactgatttggcctccttaaattcaaatttagcagtcatttttcatcctttccactcttgcagatgcaccctaattcaaacagtggaacaacttctatttgcatcatcgacgactgcagaaccaatattgacaccttgggtacattctttcatccttaaaattatcccatttcttatatctcccgtgttattttcagcactccttccttttccttttgaaagttatgaattgtttttacctgtgcttgtgaactaaatctatgcttggcacagcctctgatgcgagcactcgatgatatggaaaatgccaacgcacaagttgaagtttctgtggaagaagtaacgaaggctcgcacccaaaagataaaggtattatcatgtgcttcttttccctagtccctaccaaataacatggcaaagcttgtgcgttacatattcatcgataagcatcatggtctcaattgcacattagatctttgagaatcgcgctcatgaagttgggagggagaggcaagtgttcgtcgatttcttcagcaaccccgagcgactcaagaatcaagtcagagagcttacctcccgtgtgaaagctctccaggaataaatagatagatagatatccctcgtctagtttggtaagcacatgagattcaatctctacccctgttgctcatatacaagccataaaatctcaccctctgtttctagcatttgtgtgccaggtcgtcccgcgaaatgggaagcaacagccaagctcgcaatgatgctgttgcttgcaaagtttcccttcctccaatgcgaagtttgggggaaccatcggttagtttgttggatgttgaggtgcacagctgctgttgttatattttggggatgcagtcgtgattgttgtaaagtaaccacgagcccgtttcgtcgtctgattgatattcaggctagatggtggttgtacatttgtgtactggtgttgggagactcgaaaactagcattgcttagtgtgtatattagattgatcttcaattatttgaacactgctaatgagccctatattagattgatcttcaatta</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0186500, RefSeq:Os06g0186500