Os06g0186600

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Revision as of 09:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0186600| Description = Conserved hypothetical protein| Version = NM_001063546.1 GI:115466823 GeneID:4340346| Length = 5384 bp| Definition ...")
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Gene Name

Os06g0186600

Description

Conserved hypothetical protein

Version

NM_001063546.1 GI:115466823 GeneID:4340346

Length

5384 bp

Definition

Oryza sativa Japonica Group Os06g0186600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:4370001..4375384

Sequence Coding Region

4370317..4370888,4371201..4371520,4372336..4372442,4372523..4372696,4373140..4373385

Expression

GEO Profiles:Os06g0186600

Genome Context

<gbrowseImage1> name=NC_008399:4370001..4375384 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:4370001..4375384 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtatcacaatgtacttgacgagcctagcccattgggtctgcggttaagaaaaagtccatctctcttggatttgattcagatgagactttctcaagcaaattcgactgcaggacagtcctctgcagatgattgcagttctgagcctccaaaaaagaaagaccttaaatcaggcacatcaacagctggggagcgcttgaaagcttcaaactttcctgcaaatattttgagaattggcacatgggagtatatatcacggtatgaaggtgatttggtggcaaaatgttacttcgcaaaacataagcttgtatgggaagttctggaaggtggtttgaagagtaagatagaaattcagtggtcggatattactgcattgaaggcatcttgccctgaaaatggacagggaaccttggatgtggtgttggcccgacctcctctcttcttcaaagagacggatcctcaaccaaggaaacacacactgtggcaagctacatctgatttcacaggtggccaagcaagtatgaacaggaggcattttctacagtgcccttcaagcttgttgagcaaaaactttgaaaagcttctccagtgtgatcagcggctaaaccaattgagtcagcaaccagacatcatattggactctcccgtttttgaacccagatgctctatatttgaggacccagttgaatcgaagtgccaaggttttactaatttgaaggacgaacatgaattatctgggttttcaggttctctgtcaccctgtgctggttcatccatgtctgctaagattgaagtcaatgattccattgcaacgcaagcaggatttcttgctcagccaggaaacccaggacctagtgcagtgaacgttcagggagtcagcagaaacgtaaatggtgctccagagttaaatatccccagctggtggagtcaactgaaagtgcctgggcttagaccgtctatgtcagtggatgatttggtaaaccacttgggaaactgcatctcggagcagatcacatcagtcaatcctacattgcccagcaacgaggtgccaacaaaagaaacactggaggagatcgctcagtaccttctcggagatgcacagggcccaccggcatcgacatccgacgagagatcgctgatggcgagggtggactccctctgctgtttgattcagaaagatacgccaccggtggcccagccaaagcctgaaccaaacgacagtgatagcattggaggcgatggcaccgaaggttccgatgaagaatttagctcggctgcatccacagtgaaaactacaggtcccgctcagccaccagccatgtcaaggaaggactccttcggagatctgctgatgaatcttccccgcatcgcctcgttgccccagttccttttcaagatacccgaggattctgagaattga</cdnaseq>

Protein Sequence

<aaseq>MYHNVLDEPSPLGLRLRKSPSLLDLIQMRLSQANSTAGQSSADD CSSEPPKKKDLKSGTSTAGERLKASNFPANILRIGTWEYISRYEGDLVAKCYFAKHKL VWEVLEGGLKSKIEIQWSDITALKASCPENGQGTLDVVLARPPLFFKETDPQPRKHTL WQATSDFTGGQASMNRRHFLQCPSSLLSKNFEKLLQCDQRLNQLSQQPDIILDSPVFE PRCSIFEDPVESKCQGFTNLKDEHELSGFSGSLSPCAGSSMSAKIEVNDSIATQAGFL AQPGNPGPSAVNVQGVSRNVNGAPELNIPSWWSQLKVPGLRPSMSVDDLVNHLGNCIS EQITSVNPTLPSNEVPTKETLEEIAQYLLGDAQGPPASTSDERSLMARVDSLCCLIQK DTPPVAQPKPEPNDSDSIGGDGTEGSDEEFSSAASTVKTTGPAQPPAMSRKDSFGDLL MNLPRIASLPQFLFKIPEDSEN</aaseq>

Gene Sequence

<dnaseqindica>4497..5068#3865..4184#2943..3049#2689..2862#2000..2245#gcttcccttcctctcgaatcacttcgattcgatttcgcttcgcttcgcctcgcgttcgccttctgcttcgatttcgacttcgattcggccggcggcggcggcggcggcgtcggtttggggggagttagggttagggttagggttagggtttccgggggtgatccctcccatggtgcagctgccgagctccgggaagcggccggccgagccggccatggcggcggcgtcggcggcgggggctacggtgaagctggaggcggacgagatgctgcatggcggcgaagaggacggcggcccgctcagcaagcgcgccaaggcgggggtccagatgcccgcgccgccgcctccgcctccgcccccgcagcagcaggtagatccgggggggggggggggggtttcgtgttctcgtattccgtttggtgggttttgatcgggggatgaggtggtagcgcgtcggattcgtaatgcttggcggcgagacggcgcgttttggtgctggattgtttgagggaggggaatcctttcttccctggcgtgtttttgacgcgtttgatccgaaaatactgtatatatgtggactcgagatggatggaatagaggggtataggtggatggaatagaatagtacagttttttttttggagtgatttgattgttcggatatggaatcgctagctgatgttgttagagagatcgcatgcacggtttgtgttgtaaatgtactgagaaatggttgttctgttcttagttgaatcaggtagggtcacagtctgcttgttggggttcaagtttatggatatgttttggatgtatctctatgataatatgctgtgcaggagcctggtattattgtgccattttgaggctgatggggcttcattgacgtccgatgatttgctgcagcggcacacttatttatatatttaactttgtgtattcatgtcacaagtcatgtgcatttgttcaatgtaatagggtaatgcctgtttatagtatgtcaaactgctaagttccgtactttgcgtgttatagaaaattttctaggaccaatcatcaatgctaacttccctttgcaagtagtgtacctatttggagcttggaataaaaatttttcgtcagaatccagtaagatgtgtgtgatataatcaataaccgatgcatagcacaccattttgagtgcttcctacttgggcagtaaaatgcgttgttagttcattttttcccaatcttaaataaaatctctagctggtattctttatgaaccatggaataggtgaaatatgccatatgactatcccatgcatgcattttctaacgcttgggagctagagcaatcctaatagttgaaatagcttataaatgtctgcccttttaacctattcaatgatttatgattctatattccatggaaaaagatccgtatcaggatttgctgattaggtgttgatatgtgacttggatatcaatgtttatttgtggaactgactgtgttctattcaagtagagcattggcatattatcaagctgatatgcaaattgcgttggtgtattaccaggccgacatgcaaagtgcatagacgagccatcatagagttcacgtgtagtttgcatgtagtactgtaatggttaacagagtcatcataaagttcatagacggttttggtcggaaagacgagaaaatgttaatggctacataaatgaaatggtcaaactagaatgctagatggtccaggatttgcctaggatgcatgcttgcttatcaatacacgaaagattgcttgcgttatttatgaaattccatatttgtcctcttcttgacttgttctatttgtgaaaatccaaatttgtcctcttcgccacttcgtgttatttgtgaaattccaaatttgtcctctttgtgactaattaatgttagttggtaatgtatacgtaaccaattatagtctaaaatggcagctttggtattcatattctttgctgacttgaacatttgcaggatatgtatcacaatgtacttgacgagcctagcccattgggtctgcggttaagaaaaagtccatctctcttggatttgattcagatgagactttctcaagcaaattcgactgcaggacagtcctctgcagatgattgcagttctgagcctccaaaaaagaaagaccttaaatcaggcacatcaacagctggggagcgcttgaaagcttcaaactttcctgcaaatattttgagaattggcacatgggaggtaagaatctagatatagcttttagtagttctgccacaaccttgacatttatttaattttggcgtcctccttttctgttgcttttttatttctttcaatcaaaattatttactatctacacagaaacattcttttgttgaggtacattcttagtttctgagtctcattgtggtgatgctgtttgcatgtaatacttccgatcttatgtaagcatagtacttactatagtttatattgtacaccactgtgagatgttaatgcaacattaaaacatcctatatcctgtcctaatggccaattatttgctacagtaggtagtcatttgcccaaaagccttattcctgcatgttgttgaatctacgacctagtgtttagtcacatttagagcagttctcctgaacaattgttggccataatcttaactgtattctatctctgagcagtatatatcacggtatgaaggtgatttggtggcaaaatgttacttcgcaaaacataagcttgtatgggaagttctggaaggtggtttgaagagtaagatagaaattcagtggtcggatattactgcattgaaggcatcttgccctgaaaatggacagggaaccttggatgtggtggtaagttattttaaagattattggttcatgttactttcctatcttgctttttttctgagaggtttctattattaatgaagttggcccgacctcctctcttcttcaaagagacggatcctcaaccaaggaaacacacactgtggcaagctacatctgatttcacaggtggccaagcaagtatgaacaggtaaggaaagcattaaatgtatgctagagcaaaatttgaatgcatttcttttgggtaggtgctagggtgtaatgggatcttagggtgagtttggcagggatgtttgcctgtagctattgttgtctcagagaatggggcgtatcagtagcgcatgattaattaagtattaactattataaatttgaaaaatggatttattgattctttaaaataactcctatatagaaaattgcatcttagaacccaacattacagtaacaggacagcaagtattgttatttttgtctctataagtagggtaatacagaacacgaactatgcttaccacttatcagtgtcttgtagtacattagtctatggttactgcatccttaatctggtttttaatttaagattacttttatggtgccttttctattagtagatttactgagggaactctgatttctttctggaggtaaaaaggtcataagaaatatttaaagctcacagctacgagaaagaaagtcaacataaactttaagatagctcttcagccttaagccagctatctacagaagaagtttcagcatcatctcctcgtaggagactactccctccgtcctaaaataaaccaaccccgtacgggatgtgacacatcctagtacgatgaatctggacacacatctggtatgagattggtttattttgggatggagggagtatgtttcttagcctaattccatttcagtttattacttgctgagcttccaatctcgatgtgccccccaccccaccccaccctcttatattcagtgtttccaaaaaaattgcaggaggcattttctacagtgcccttcaagcttgttgagcaaaaactttgaaaagcttctccagtgtgatcagcggctaaaccaattgagtcagcaaccagacatcatattggactctcccgtttttgaacccagatgctctatatttgaggacccagttgaatcgaagtgccaaggttttactaatttgaaggacgaacatgaattatctgggttttcaggttctctgtcaccctgtgctggttcatccatgtctgctaagattgaagtcaatgattccattgcaacgcaagcaggatttcttgctcagccaggaaacccaggtaaattgcccatgatgccatttccactgtccctcttcttgcacttcctgtctttgactagatatattgctggtagatgcatcgcaatttttctcagaattactacatttagttacttcaatagattctccaccacaatttttttggtcatctgagatgcgtcatatctgttcaattaaattacacatgtagttagactgatgtgctgacctagtacttctagttataatatgattataagttacaatgccttctacacaaaattctcttgtgttcaagattgaattttctaattctatagttatttaccaggacctagtgcagtgaacgttcagggagtcagcagaaacgtaaatggtgctccagagttaaatatccccagctggtggagtcaactgaaagtgcctgggcttagaccgtctatgtcagtggatgatttggtaaaccacttgggaaactgcatctcggagcagatcacatcagtcaatcctacattgcccagcaacgaggtgccaacaaaagaaacactggaggagatcgctcagtaccttctcggagatgcacagggcccaccggcatcgacatccgacgagagatcgctgatggcgagggtggactccctctgctgtttgattcagaaagatacgccaccggtggcccagccaaagcctgaaccaaacgacagtgatagcattggaggcgatggcaccgaaggttccgatgaagaatttagctcggctgcatccacagtgaaaactacaggtcccgctcagccaccagccatgtcaaggaaggactccttcggagatctgctgatgaatcttccccgcatcgcctcgttgccccagttccttttcaagatacccgaggattctgagaattgagtctggatatcccaggacttcgatcctcaattcctcattccctaaatgagggaagcttctgtaaaaagagatttgtacctgagcaataagccagcccgaccccccctctcttgtcttctgtggatgagatgagagagctgttcttagtcttcagtatccaccctgtaaatgtgtaatcgattaggttgcttcggatcgtgtcggtatctttcaggattgctatgggtcgtggataaagtgttcattggttctttttaactcgggcttgcccttgtgcaaaattagaattcaagtcaaattgtttacaactttcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0186600, RefSeq:Os06g0186600