Os06g0190700

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Revision as of 09:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0190700| Description = Ionotropic glutamate receptor family protein| Version = NM_001187718.1 GI:297724566 GeneID:9267556| Length = 4814 bp...")
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Gene Name

Os06g0190700

Description

Ionotropic glutamate receptor family protein

Version

NM_001187718.1 GI:297724566 GeneID:9267556

Length

4814 bp

Definition

Oryza sativa Japonica Group Os06g0190700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:4586988..4591801

Sequence Coding Region

4586988..4587479,4587811..4588149,4588186..4588223,4588329..4588644,4588725..4588978
,4589770..4589835,4591606..4591801

Expression

GEO Profiles:Os06g0190700

Genome Context

<gbrowseImage1> name=NC_008399:4586988..4591801 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:4586988..4591801 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcgcggcggctggctatggcggcggcggcggcggtggtgcccgtcctgctcgttgtttggagttcggcggtggcggcggcggcggcggcgacgacgggaggagatgtttccgtggcgttggaggcctaccgcttggacccgaatggcagtggttcgcgcacgggtgctatcacggctgctcacggcgatgggcggctccgccgtaccaagcctcgcagtcgcagggccatggccccatccgtccaacttggaggagaaaccaagagaactaatgctggggtgaggagagacctaggagcactacctagaggatatgggaaggaactcaagattgcagtgccatggaaaccaggttttaaagcttttctgaatgtaactgacagaagtgtcggtggctattgcattgatgtatttgaggctgccgtgaagaagttaccacaccatctgagttataagtttgttgtcttcaacggttcttatgacgagctagtacagcgtgtgtcttcagggaactatgatgcagcagtgggggatgtaacaataactgccgagcgaaccatccatgcagacttcacgatgccatacacagagtctggtgtgtcaatgcttgtactcatggagaatgactctaaatcaacaatcgaatgggtattcttgaagccactaacaagggagctttgggttgccactgtgatcttcttcttattcaccggcatagttatttggatgattgaacgtcccagaaatctggagtaccaaggatcaagctcaagacagttcagcactgctctctatttctctttctccactttgacattttctcatggtcacattattaaaagtcctttgtcaaaaattgttgtgagctacacagctagcttgtcatccatactaactgcgaagaagctccggccctcggagacagatcttgaacagatcctgtttgatggtgattatgttggataccaacggggatcctttgtggaatcctttttgataaaacaaggtttcagtaaaagaaggctaagaccctacacaaagaaacaagaatatgctgaagctttgaggaaggggtccatgaatggaggtgtgtctgctattgtcgatgagatcccatatttaacctcttttctttcggaccgtcgttacgagaaagaattccagatgcttagccgcatatataagacgcctggatttggttttgcgtttcctcctggttttccattggtgcataatctttcaactgccatattggatgttacgggtggggatgaaggttcacggatcgaagcaaaatggtttggcacaacggctgcccctccaagctatgcaattcctaacacagattcgacacctcttacattgcagagtttctctggtcttttcatcatcactggatgtatctcagctctcatgctgatgataagcatttctaagtcagttcttgccaattacaccagaattagagattctgaagtgcgaagtcccgatgcggatggtggaaatggaggtcgcgaagaacgtaactcagcacaaaacgtcatgggtgatggctatgtggatgatcgacctcaccatgaaatcagaattgacagttcccaggatatccatgggagtgtcgaacgtgctgacggcgaagagcctggaccaattcagaatggctctgtgcctgcaaattccagccagaccggatga</cdnaseq>

Protein Sequence

<aaseq>MEARRLAMAAAAAVVPVLLVVWSSAVAAAAAATTGGDVSVALEA YRLDPNGSGSRTGAITAAHGDGRLRRTKPRSRRAMAPSVQLGGETKRTNAGVRRDLGA LPRGYGKELKIAVPWKPGFKAFLNVTDRSVGGYCIDVFEAAVKKLPHHLSYKFVVFNG SYDELVQRVSSGNYDAAVGDVTITAERTIHADFTMPYTESGVSMLVLMENDSKSTIEW VFLKPLTRELWVATVIFFLFTGIVIWMIERPRNLEYQGSSSRQFSTALYFSFSTLTFS HGHIIKSPLSKIVVSYTASLSSILTAKKLRPSETDLEQILFDGDYVGYQRGSFVESFL IKQGFSKRRLRPYTKKQEYAEALRKGSMNGGVSAIVDEIPYLTSFLSDRRYEKEFQML SRIYKTPGFGFAFPPGFPLVHNLSTAILDVTGGDEGSRIEAKWFGTTAAPPSYAIPNT DSTPLTLQSFSGLFIITGCISALMLMISISKSVLANYTRIRDSEVRSPDADGGNGGRE ERNSAQNVMGDGYVDDRPHHEIRIDSSQDIHGSVERADGEEPGPIQNGSVPANSSQTG </aaseq>

Gene Sequence

<dnaseqindica>4323..4814#3653..3991#3579..3616#3158..3473#2824..3077#1967..2032#1..196#atggaggcgcggcggctggctatggcggcggcggcggcggtggtgcccgtcctgctcgttgtttggagttcggcggtggcggcggcggcggcggcgacgacgggaggagatgtttccgtggcgttggaggcctaccgcttggacccgaatggcagtggttcgcgcacgggtgctatcacggctgctcacggcgatggtaaccgctcgttggtctgaattctgatatcctccctccgtaccaaaataaaccacgataagtgttttagaacgtaaaaagtagtacatttagagacctgtaatagtgagtcactgaaattgctgttctaagtacatgttaatgtttttgtgcatgctaaaacaaaatattcagttctaaatgatggcacttatgcaaatgggaatagaaccaactactaactccgttctaaattatggtaacctagttctaaattggagtacttcgaatgtggatatagctatgttcgtgttcccattcaagttttagtatgtgtctaaccacgactaacttactataaagtagagtagtatactattttttttcttatggatttctgcccaaaataaagaaacacaaaagtgctcggctatcattagggcagtcccaaccctcctcctaggatggtgtctatgacattaactacattgccatatagcacttttagcttgtgtggcactatattaattaagagagagagagtgaagagaggaagaaattgggtctcatgcaagacacaacttcaacacgagaacctatgcactagacactatcaagttttgcattgggagataatagtgtcttcataatagatgaagaataaatatgactgatagaaaagagagatgatacatttattaatggtccactttaagaaatcatgggttgtagagtgtagtttctattatgatgtcttattgacatgacaccatagacactgcttatgggtactatgggttgggactgcccttataggctcgtggttaccaccaattcatcaaacacttcatcttgtaggcctccttttgaacgggagaatttcgaaagaatattagagaaatcgagctaaactgtctgaaattccgacgaatttcctacattcctaaggagcggtgaaactcatccgaggtagatttcagcagtcttaacgataggattagttcttgcaacaggcaaaacggagatttataaacgtgccacgtatacatttgctgttttgccatgtgtatgacatgtggccgcggggcccggttgtacttaaacaacacaatatttcgagaaaaaatagggcacctagaaaagagaggaaaataaatgcccctagtattaacaaaataaatcttatctattatgatcaagttatacaaaaccaaaattttattgacacataacacataaatccatatattatatttataaagtttcacaaaaactgtaactaattatatatgttcttatatcaaaatgtaaaaaaaaaacttcaaaatttaaaaaaggctatgtatatttacactatggataaaaatactcataaagttaaggtgtgaccgtataactaaaaaatcatggttgatcaaagattaaaattatcaatagtgtgatttttgtaaaactttatatcatatcatacggagtaatacgtaaaagaaaacgagaaaaaaaaagataggtgatccgtagccgcaaccccttcgtcggcgtccactccctccggtgatgccgccggcgcactccaatggaggagaggcgcgcggcggcgttagcggttgcgacaaccgctattctacaccaatcgcctccatccccaccacccccaatcacaccacgctggcgcggcgccggctgctggctgctggctgccgtctgacaagtagggattgccgccgccgacggaagggggggggggggggttcagagctcccgtcttccagcacgcgtgcgcgcatgcagggcggctccgccgtaccaagcctcgcagtcgcagggccatggccccatccgtccaacttggaggaggttcgctgttcatcctggttttgtttctagtgcaggatcagtttgtgaattgttattgctatgtagaagtatcctagtgacttctaagtaatttaggataaaattagtagtgaatagtaggaggactaacttagggatttaatcttgaatcattcgatatatgagagctgaatgttcagtgagccaaatataggtagtgccacccgtgatacacaaagaaattgaatggtaagaaaaaaacagtgcacttgcatacctctgataggatgtaaaaatctgaattacccttgatgataaagaggaggaccttgcattggttctgttagaagcaaatcctggggggcttaacttggtggaatatatggcttgaaccaaatagaagaacatttagtagcgtgctctggtttttccgccctccttgaggcactgtttttttgtttctttctctcctgccgcaaagatcgctctcctgtaatgttgccttcctgccagacttttgcttctccctcttaatatatccggcagagctcctgctgtagtggtttcaaaaaagaaaaatataacctgttgcgttagtcactattatcaataaaaatatagccgagggaaatgttttcatttgccatatgcacttctcctatggactgtacctaacagtattgcttaggaaatttgtgaccttccttctatcatgcaaatagacacaaataattcttgctattgttgtgctatgttcaattttgctcataggacacgagacttggacatgaaccaatccttttttcatccagaaaccaagagaactaatgctggggtgaggagagacctaggagcactacctagaggatatgggaaggaactcaagattgcagtgccatggaaaccaggttttaaagcttttctgaatgtaactgacagaagtgtcggtggctattgcattgatgtatttgaggctgccgtgaagaagttaccacaccatctgagttataagtttgttgtcttcaacggttcttatgacgagctagtacagcgtgtgtcttcaggggtgagccttacttactgtgcttgcaaatcataatcaaagaatcaagtacttacattatgtctgctggttcttactaccagaactatgatgcagcagtgggggatgtaacaataactgccgagcgaaccatccatgcagacttcacgatgccatacacagagtctggtgtgtcaatgcttgtactcatggagaatgactctaaatcaacaatcgaatgggtattcttgaagccactaacaagggagctttgggttgccactgtgatcttcttcttattcaccggcatagttatttggatgattgaacgtcccagaaatctggagtaccaaggatcaagctcaagacagttcagcactgctctctatttctctttctccactttgacattttctcatggttagtacttagagctccaaattgcaggctatatttgattcactataagtggcttaatttagtttcttgcagtagttcttaaataacctattgtctttgttacaggtcacattattaaaagtcctttgtcaaaaattgttgtggtaatctggtgcttcgtggtgctggttcttgtgcagagctacacagctagcttgtcatccatactaactgcgaagaagctccggccctcggagacagatcttgaacagatcctgtttgatggtgattatgttggataccaacggggatcctttgtggaatcctttttgataaaacaaggtttcagtaaaagaaggctaagaccctacacaaagaaacaagaatatgctgaagctttgaggaaggggtccatgaatggaggtgtgtctgctattgtcgatgagatcccatatttaacctcttttctttcggaccgtcgttacgagaaagaattccagatgcttagccgcatatataagacgcctggatttggttttgtaagcctctcactctcactctattgcttccatttttttagataatgaaaatggattacatcttcggcttccatggattatttgcattgagaatgagtttatttgcttctgtcataagacacagccataagtttgataaaaaaaaagtgaagataaaaataaatgagaatgagacataaagtgatggggcaaatccccaactcccatttattatttactagcgttattgactctattgcttccatggattcgctcttcagccttcaagagatatactacattctggacaaaatatgctggactaattggcattgtgcttttttgctttcaggcgtttcctcctggttttccattggtgcataatctttcaactgccatattggatgttacgggtggggatgaaggttcacggatcgaagcaaaatggtttggcacaacggctgcccctccaagctatgcaattcctaacacagattcgacacctcttacattgcagagtttctctggtcttttcatcatcactggatgtatctcagctctcatgctgatgataagcatttctaagtcagttcttgccaattacaccagaattagagattctgaagtgcgaagtcccgatgcggatggtggaaatggaggtcgcgaagaacgtaactcagcacaaaacgtcatgggtgatggctatgtggatgatcgacctcaccatgaaatcagaattgacagttcccaggatatccatgggagtgtcgaacgtgctgacggcgaagagcctggaccaattcagaatggctctgtgcctgcaaattccagccagaccggatga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0190700, RefSeq:Os06g0190700