Os06g0191200

From RiceWiki
Revision as of 09:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0191200| Description = The start codon is not identified.| Version = NM_001063562.1 GI:115466855 GeneID:4340366| Length = 3632 bp| Definit...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0191200

Description

The start codon is not identified.

Version

NM_001063562.1 GI:115466855 GeneID:4340366

Length

3632 bp

Definition

Oryza sativa Japonica Group Os06g0191200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:4611262..4614893

Sequence Coding Region

4611263..4611564,4611713..4611908,4612563..4613078,4613631..4613819

Expression

GEO Profiles:Os06g0191200

Genome Context

<gbrowseImage1> name=NC_008399:4611262..4614893 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:4611262..4614893 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ccggtttcaaaaactcgccccccaaaattcctcctccttcctctcgaaggcggcgaaccccatcgattcctcttcctcctccgccgcacgcgccccaatccgattcaaccgccggcggcggcggcggcggcggcggtggcggcgatggaggtcggggacctgcacaaggtgtgggagatccgcgcgctcaagagaaagcccgacgagcccgccgcccgcgcgctcctcgaccgcgtcgccaagcaggtccagcccatcatgcgccgccgcaagtggcgcgtcaaggtcctctccgagttctcgccgaagaacccgaggctgctggggctcaacgtcggcgggggagtcgaggtgaagctgcggctgcggcacgcgggacgggactacgacttcatcccctacgaggaggtgctcgacaccatgctccacgagctctgccacatcgcgcggggcccccacgacgcgcagttctacaagctctgggatgagctccgcaaggaatgtgaagaacttgtttccaagggtatcactggatcaggccaaggatttgatggtacaggtcggcggttaggtgggtttacagtacacccaccgccaccatctttaaggcaagcaacattagctgcagcacagaaacgggcaaggaatggagctcttttgccatccggtcctagaaagcttggtggaaataatgatattatgagtgctcttagtccaatacaagccgctgcaatggctgctgaaaggagaatgtatgacgatttgtggtgtggatcgcacgatcaatctggcattgatgattcagaagacgttgttattcttgaggatacacctaacttgccaacgcagcttgggaaaagcacaaaggatggcttttctagcagttctgagaatcccagcacatcttcgggatttcccacagcagcacagaatggatcctcttcttgtaggataacaaccgatgcaggagatagttctctatgggagtgtgttgcttgcacacttctaaatcagcctctggcaccaatctgtgaagtttgtagcgcagctaaacctaaaaccacgaaggccaaatatgcaacctggtcctgtaaattctgtactctagaaaacagtactaagattgacaaatgttcagcatgcgatcaatggagatattcacatggaccacctgcagccacatattgtccaagctatgattga</cdnaseq>

Protein Sequence

<aaseq>PVSKTRPPKFLLLPLEGGEPHRFLFLLRRTRPNPIQPPAAAAAA AVAAMEVGDLHKVWEIRALKRKPDEPAARALLDRVAKQVQPIMRRRKWRVKVLSEFSP KNPRLLGLNVGGGVEVKLRLRHAGRDYDFIPYEEVLDTMLHELCHIARGPHDAQFYKL WDELRKECEELVSKGITGSGQGFDGTGRRLGGFTVHPPPPSLRQATLAAAQKRARNGA LLPSGPRKLGGNNDIMSALSPIQAAAMAAERRMYDDLWCGSHDQSGIDDSEDVVILED TPNLPTQLGKSTKDGFSSSSENPSTSSGFPTAAQNGSSSCRITTDAGDSSLWECVACT LLNQPLAPICEVCSAAKPKTTKAKYATWSCKFCTLENSTKIDKCSACDQWRYSHGPPA ATYCPSYD</aaseq>

Gene Sequence

<dnaseqindica>2..303#452..647#1302..1817#2370..2558#accggtttcaaaaactcgccccccaaaattcctcctccttcctctcgaaggcggcgaaccccatcgattcctcttcctcctccgccgcacgcgccccaatccgattcaaccgccggcggcggcggcggcggcggcggtggcggcgatggaggtcggggacctgcacaaggtgtgggagatccgcgcgctcaagagaaagcccgacgagcccgccgcccgcgcgctcctcgaccgcgtcgccaagcaggtccagcccatcatgcgccgccgcaagtggcgcgtcaaggtcctctccgagttctcgtaagcgcgaaccctagccgtagcctcctcctcgtcaatctctgtctcgttcccgatcgattgatcggttttttttgtttgtttttttttttgcggggagattgatcggttttgttgcggatgtctgatttggttgttgggggatcaggccgaagaacccgaggctgctggggctcaacgtcggcgggggagtcgaggtgaagctgcggctgcggcacgcgggacgggactacgacttcatcccctacgaggaggtgctcgacaccatgctccacgagctctgccacatcgcgcggggcccccacgacgcgcagttctacaagctctgggatgagctccgcaaggtacatagattttttattttgtatgattgtgtggtgattgaaactaatttttatgattccatctctagatgtcgtgaacaatcgaacatacgagtagtagatgtattgctcaatgtggtgctcttgtataaaactgggaattcagagttgtgtcgatgctgcatttagggtctatctggcatagaaagtgggaagtatccatagtccctcgcaagttggagaatatcccacagagtggtaattcaggttattttatagaatcaaacatcatccagcttgattgttaatgttttaatcaaaatcatgctaaatcagccataaaatagatggaatcggtctcttcagcacatgtgtagagtgcatacatatactttatatagattgtagaggtaggaaccagctatattgcgttgtactattagtttctgatggagctgggattggagtgggcaatagagcaagtatgcacttagtcgtggtttgcatagaagcacaaaaaagatttacctgtgctacgacagtaattcctgcaaggaaaagttgtagcttaagaactggtgtgttcattgcatcgaatttaactgaaagctcaatagcccatccttattcagcctactgtcttaagcttatgctatttatggaaaaaccattcaggaatgtgaagaacttgtttccaagggtatcactggatcaggccaaggatttgatggtacaggtcggcggttaggtgggtttacagtacacccaccgccaccatctttaaggcaagcaacattagctgcagcacagaaacgggcaaggaatggagctcttttgccatccggtcctagaaagcttggtggaaataatgatattatgagtgctcttagtccaatacaagccgctgcaatggctgctgaaaggagaatgtatgacgatttgtggtgtggatcgcacgatcaatctggcattgatgattcagaagacgttgttattcttgaggatacacctaacttgccaacgcagcttgggaaaagcacaaaggatggcttttctagcagttctgagaatcccagcacatcttcgggatttcccacagcagcacagaatggatcctcttcttgtaggataacaaccgatgcaggagatagttctctatgggagtgtgttgcttgcacacttctaaatcaggtatgttttcttttgtaagcaaggagtttctataacagataaacctttttaaatggggttatttttcactggatagatttcatactgaccttccagcatattttttgaagtccactcattatggtggacttgtaaattacaaatattcgaacggtatccaattatccacatacttaagtgctttgtatgcctgaaagtattacattactgcatagatgtaattcaaacatatgaaaaaccaaattccatttggacagcttctgataaatggcacagaaatgccatatattaatgtatcatacaagagaagggctttgacgttgtttctttgcctgaatgttgagccttttctattgcttttctttattttcgtgtgcaaacttaaccttatttcgtagccccttttatattttgtgcatactgaatacacttttcctggtgtgttgtttctttaccagaggcatttttctcgctttgctaaaatttattgtctgagaaaggttatttgaacattataattattaattctcttcatttctaatacttttgtagcctctggcaccaatctgtgaagtttgtagcgcagctaaacctaaaaccacgaaggccaaatatgcaacctggtcctgtaaattctgtactctagaaaacagtactaagattgacaaatgttcagcatgcgatcaatggagatattcacatggaccacctgcagccacatattgtccaagctatgattgatctacattgaagcttgcattaatatggtaagtaccactacattgtaggcacattaaatttaattttcttttggaggcaattttttgctttcatgttggtggattaaacatatccactaatggtatagaagtacagttaagtgaccttctttctgcactcacctactaacaaatttatcttggcctatcaagctgactttctttctgtattcaattcgtaatatacagtttggtggtgttgcaccatagctatctttttgacccagatttgcttatgtagttacattcattcgctccataaatctctatccacttaactgaattgtattattgtaacaacaatttcatgtggttattgcaggactacagaattttggacagccatctgctgaattgtggatacacaaattcgttcccatcagcagttctatctgttaccccattgcacttctgcataacgaatcagatgtgtaatttactatctaaagcattccctctttcgtggatcacatcatgtgtatagagagaaccacctattggaaacatctgacatatcccaagctccctctgggagcagctaacgcttgaaccattttcaatccttcctgctcctgaagtcctgaagcatgaccgagcacgctggtatgttttggctctgaacttgtgatggcaacacaattgtccttactgcattatctattgcaatggtgttttcacatgcttagataatgcaaccgtgcatgtttaaccaggtactatcatgagtcgctgttgctgcagttgagcgatataagctgtcacttcattctaatcaactaaggtcgttgactttttattcgtcctcgtctaatttctccatttggcagctttgggtttgctcttggttgggtgccaactgccaatgacttgacaagttgacattgtatggtcaaagcccaatgggggagtgagctttatcacttgtgtaacgattaacaaatttcttaaaatcattcccgtggtagaatctcgagcgaaaccaacactggctccttttgaaacaaaggaattttacatgttcataggaatttgattc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0191200, RefSeq:Os06g0191200