Os06g0199500

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Revision as of 09:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0199500| Description = Similar to Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) (Halotolerance protein Hal3a) (AtHal3a) (PPCDC) (At...")
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Gene Name

Os06g0199500

Description

Similar to Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) (Halotolerance protein Hal3a) (AtHal3a) (PPCDC) (AtCoaC)

Version

NM_001063603.1 GI:115466937 GeneID:4340408

Length

2496 bp

Definition

Oryza sativa Japonica Group Os06g0199500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:5053304..5055799

Sequence Coding Region

5054224..5054547,5054676..5055014

Expression

GEO Profiles:Os06g0199500

Genome Context

<gbrowseImage1> name=NC_008399:5053304..5055799 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:5053304..5055799 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgactacatcagagtcagtacaagaaaccttgggattggatttccctcatcctagcaaacctcgggtcctccttgctgcctctggaagcgtcgctgctataaaatttgagagcctttgccgtagcttctcggaatgggcagaagtcagagccgtcgccaccaaggcttcattacattttattgatagaacgtctctgcctagcaatattattctttacactgatgatgatgaatggtctacctggaagaagataggggatgaagttttgcacattgaactgcgaaaatgggcagatatcatggtgattgcgccattatcagctaataccctagctaagattgctggtggtttatgtgacaacctcttgacatgcatagtgagagcatgggactacagcaaaccactctttgttgccccagctatgaacaccttcatgtggaacaacccgttcaccagtcgtcatcttgagacaatcaacctgctaggtatatctttggtccctcccattaccaaaaggctggcctgtggtgattatggtaatggtgcaatggctgagccttctgtgatcgattccaccgtcaggcttgcttgcaagagacagccacttaatacaaatagttcacctgtggttcctgccggcagaaacctcccatctagctga</cdnaseq>

Protein Sequence

<aaseq>MTTSESVQETLGLDFPHPSKPRVLLAASGSVAAIKFESLCRSFS EWAEVRAVATKASLHFIDRTSLPSNIILYTDDDEWSTWKKIGDEVLHIELRKWADIMV IAPLSANTLAKIAGGLCDNLLTCIVRAWDYSKPLFVAPAMNTFMWNNPFTSRHLETIN LLGISLVPPITKRLACGDYGNGAMAEPSVIDSTVRLACKRQPLNTNSSPVVPAGRNLP SS</aaseq>

Gene Sequence

<dnaseqindica>1253..1576#786..1124#cccacaccaaaacttcgaggcccccgtcgcggcaccctcctccgccgccggatctccaccggagtacggcgccggccaccccctcctcccccggatcttcaccgccggtgagtcccccgctccttcccataatctctcggtgagtctccgcctcttcccgtcctcctccttgctcccccgcgccccgcctcctcaagcgcacggccggcgaacacccagaggcgctgtgtgcggccggcctcctatcgttgtcccacccccaacgtagccttctcttctccccactgccggatcctcgcttgcgcggccggggagcagcgttggagccaggggtgcgaccttcctccatcttggttcgaatggtagcgtttgtttcctagaggaattggggggctcagctgagaaccatggccggcgttagtttctggccatcttagcacaatgacactacggagtattaatttgtactaggtgaggttatttccacctccaatctgagtttagttttagttagaccgctacatcaatccaagcttgcaaggtaggaacagaaactagtgaccagtttgctaatgtatttatcatgatgcaattacctttgtttttgaactaatctttagcttagatatggaatccgtgaatgaaatggcatttcccctttctgtttcactttcatttcattccagaaattcattgtgaatagagttttcgtatagcagcataaagatcttctgaattcatgtaattctaatgtagtggagcggtacaggtgaagtactgaggtgatgactacatcagagtcagtacaagaaaccttgggattggatttccctcatcctagcaaacctcgggtcctccttgctgcctctggaagcgtcgctgctataaaatttgagagcctttgccgtagcttctcggaatgggcagaagtcagagccgtcgccaccaaggcttcattacattttattgatagaacgtctctgcctagcaatattattctttacactgatgatgatgaatggtctacctggaagaagataggggatgaagttttgcacattgaactgcgaaaatgggcagatatcatggtgattgcgccattatcagctaataccctagctaaggtatgtgattttcttttctttttctggtgtgaaccatatattttttatgttgaatcctggatttgtttgacaatgtcaacttgttttcgctgcctacaaaaaagtgacactggattagttttgttcagattgctggtggtttatgtgacaacctcttgacatgcatagtgagagcatgggactacagcaaaccactctttgttgccccagctatgaacaccttcatgtggaacaacccgttcaccagtcgtcatcttgagacaatcaacctgctaggtatatctttggtccctcccattaccaaaaggctggcctgtggtgattatggtaatggtgcaatggctgagccttctgtgatcgattccaccgtcaggcttgcttgcaagagacagccacttaatacaaatagttcacctgtggttcctgccggcagaaacctcccatctagctgatgcggcaactattctgttcaagattaaactctggacctagttttctatggtaaagagtacttcgtgtcacaaaatgaaatgttaagtgatgtctatgtcggccaacatagcacctttattggccagttgttgtactactattagtgatatggtaggacgtggagattggagaaaggctattgtcccagcactttaatgttgcttttccaaatttcttgtgacataatgctaaggtgctgatgaatatgttcatgttgtagcactatttttttctgcaaatgtttgcaaagactcgtgatggaatcaaaatgtagcaggttgttctttcatccttttctttttgtgcagcatgcgtatattggaaggtgaacttgtctggtgtgcaaatgctgcactttcctgcttggatacgcagccgctaaagcttggacatgacggcttacctgaatcctttgtttcgatctacgcttccctctcgttgatgactggtgatttgtcgcatggatcacttgaagctggtgcaggaacaaactgagaatgacatgtggcaggcaagccctgtgaatgcaaaaaagaaaatggtgactaagcaagaagataatgccaagttcagataagcatttggtaggggattgcaacaagctgggtgaaggtggcgtttcaagtttagtcatcatctgcaccccacaaggatatggtgaggaatggtttaccgatcaattggaaagattatgaccgttcaacatcgactcttttggataattctgcctatatggtatgcatgataaagctcaactagaggagtaacacaaaaaatgccatgcatatatttatcaatcagcatgactgaacttgaagttgaactgcatatggttggccatggtgtatgttgaaatagtaacacagtggtgttgaagttg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0199500, RefSeq:Os06g0199500