Os06g0210400

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Revision as of 09:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0210400| Description = Legume lectin, beta domain containing protein| Version = NM_001063649.1 GI:115467029 GeneID:4340458| Length = 2368 b...")
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Gene Name

Os06g0210400

Description

Legume lectin, beta domain containing protein

Version

NM_001063649.1 GI:115467029 GeneID:4340458

Length

2368 bp

Definition

Oryza sativa Japonica Group Os06g0210400, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:5632355..5634722

Sequence Coding Region

5632494..5634626

Expression

GEO Profiles:Os06g0210400

Genome Context

<gbrowseImage1> name=NC_008399:5632355..5634722 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:5632355..5634722 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatcgcacgcgataccgttctgcgtttcgccgtgcgattgttcgtcgtgatcgtcgtctcgtctcgttcttcctcggccgacgacggcggcggcgacggcggcgtcgacttcatctaccaaggtttccagcacgcggcgaacctgaccatggacgggtcggcgaaggtgctgcacggcggcgcgctccagctcaccaacgacagcaaccgcctcgtcggccacgcgttccacgccgcgccggtgcggtttctcgacgacggcgccggcggcggcgggggaggagtggtgtcgtcgttcagcacggcgttcgtcctcgacatcgtcaccgtcgggagcggcggcggccacggcctcgcgttcgtggtggcgccgtccgccacgctccccggcgcgtccccggagatctacctcggcgtcctcgggccccgcaccaacgggaacgcgtccgaccacgtcttcgccgtcgagttcgacacggtgatggacctcgagatgaacgacaccaacggcaaccacgtcggcgtcgacgtgaacagcctcgtgtcggtcgtgtcggagccggtggcgtactacgccggcgacgggagcaccaaggtgcccgtgcagctggagagcgcgcagcaaatccaggcgtggatagactacgacggcggcagcagcatcctcaacgtcaccgtcgcgccggcgacggtgacggagcggcctcgccggccgctcatctccacgaagctcgacctcctgccgatcttcaaggagaacatgtacgttgggttctcgtcggcgacggggaagctggcgagctcgcactacatcttggcatggagcttccggacgaacggcgtcgcgcaatccatcgatctccggaggctgcccaaagtcccgaggcagagctcgccgccgcccaagctgctcatcatcaagttcgccgcggtggcctgtgcaggaacactcaccctgatcgccgcggcgatggtcgccgtgctctggctccggcgaagggcggcgctcgccgacacgctggaggagtgggagctggagcaccctcagaggatcccgtacaaggagctctacaaggcgaccaaggggttcaaggagagcgagctccttggcgccggcggcttcggccaggtgtacagaggcgtgctccggcgccgctccggcgaggcggtggcgatcaagcggatctcgaacgggacacggcaagggatgagggagttcgtcgccgaggtcgccagcctcgggcggatgcgccaccgcaacctggtcgagctgcgcgggtggtgcaagcacgaccaggacctgctcctcgtctacgagttcatgcccggcggcagcctcgatgcgcggctgttcggcacggcggcgtcggcggcggcggcggagggggtgaaagcgccaccgccgccgccgcttctgacgtgggcgcagcggttcgccatcctcaagggcgtcgcccatggcctgctctacctgcacgaggagtgggagcacgtggtggtgcaccgcgacgtgaaggcgaacaacgtgctcctcggcgccggcgacacgggggccgcccggctcggcgacttcggcctcgcgaggctctacgagcacggcgcgacgccggcgacgacgcgcgtggccggcacgctgggctacatggcgcccgagctcacgttcaccagccgcgccacgacggccaccgacgtgttctccttcggcgcgctgctcctcgaggtggcgtgcgggcgccgcccgatcgagccggcggcggcgggggaggcggacggcgacgtgctcctggtgcggtgggtgcgagaccgcgcgctcgacggcgacggcggcggcggcgacgtgctgcgagccgtggacccgaggctggaggggtgctacgacgaggaggaggcgaggctggtgctgtggctcgggctgatgtgcagccaggcgaggccggaggcgaggcccagcatgaggcaggtgtgccggtatctcgacggcgaggagatgctgcaggaggacgccacgccggcggcgatcttctccggcgccgactcgtccgatctcttcggtggctcgttcgtcgtgtccatgacgtcatcctccgccggcggcaccatgtcggccagctcgctgcaaggcggccggtga</cdnaseq>

Protein Sequence

<aaseq>MIARDTVLRFAVRLFVVIVVSSRSSSADDGGGDGGVDFIYQGFQ HAANLTMDGSAKVLHGGALQLTNDSNRLVGHAFHAAPVRFLDDGAGGGGGGVVSSFST AFVLDIVTVGSGGGHGLAFVVAPSATLPGASPEIYLGVLGPRTNGNASDHVFAVEFDT VMDLEMNDTNGNHVGVDVNSLVSVVSEPVAYYAGDGSTKVPVQLESAQQIQAWIDYDG GSSILNVTVAPATVTERPRRPLISTKLDLLPIFKENMYVGFSSATGKLASSHYILAWS FRTNGVAQSIDLRRLPKVPRQSSPPPKLLIIKFAAVACAGTLTLIAAAMVAVLWLRRR AALADTLEEWELEHPQRIPYKELYKATKGFKESELLGAGGFGQVYRGVLRRRSGEAVA IKRISNGTRQGMREFVAEVASLGRMRHRNLVELRGWCKHDQDLLLVYEFMPGGSLDAR LFGTAASAAAAEGVKAPPPPPLLTWAQRFAILKGVAHGLLYLHEEWEHVVVHRDVKAN NVLLGAGDTGAARLGDFGLARLYEHGATPATTRVAGTLGYMAPELTFTSRATTATDVF SFGALLLEVACGRRPIEPAAAGEADGDVLLVRWVRDRALDGDGGGGDVLRAVDPRLEG CYDEEEARLVLWLGLMCSQARPEARPSMRQVCRYLDGEEMLQEDATPAAIFSGADSSD LFGGSFVVSMTSSSAGGTMSASSLQGGR</aaseq>

Gene Sequence

<dnaseqindica>97..2229#aatcaaacatagcagcttagctcactttcagttcgttcgatctcgcttccatttcttcgccatttgagctttcttggaggcgtttgatcgatcaggatgatcgcacgcgataccgttctgcgtttcgccgtgcgattgttcgtcgtgatcgtcgtctcgtctcgttcttcctcggccgacgacggcggcggcgacggcggcgtcgacttcatctaccaaggtttccagcacgcggcgaacctgaccatggacgggtcggcgaaggtgctgcacggcggcgcgctccagctcaccaacgacagcaaccgcctcgtcggccacgcgttccacgccgcgccggtgcggtttctcgacgacggcgccggcggcggcgggggaggagtggtgtcgtcgttcagcacggcgttcgtcctcgacatcgtcaccgtcgggagcggcggcggccacggcctcgcgttcgtggtggcgccgtccgccacgctccccggcgcgtccccggagatctacctcggcgtcctcgggccccgcaccaacgggaacgcgtccgaccacgtcttcgccgtcgagttcgacacggtgatggacctcgagatgaacgacaccaacggcaaccacgtcggcgtcgacgtgaacagcctcgtgtcggtcgtgtcggagccggtggcgtactacgccggcgacgggagcaccaaggtgcccgtgcagctggagagcgcgcagcaaatccaggcgtggatagactacgacggcggcagcagcatcctcaacgtcaccgtcgcgccggcgacggtgacggagcggcctcgccggccgctcatctccacgaagctcgacctcctgccgatcttcaaggagaacatgtacgttgggttctcgtcggcgacggggaagctggcgagctcgcactacatcttggcatggagcttccggacgaacggcgtcgcgcaatccatcgatctccggaggctgcccaaagtcccgaggcagagctcgccgccgcccaagctgctcatcatcaagttcgccgcggtggcctgtgcaggaacactcaccctgatcgccgcggcgatggtcgccgtgctctggctccggcgaagggcggcgctcgccgacacgctggaggagtgggagctggagcaccctcagaggatcccgtacaaggagctctacaaggcgaccaaggggttcaaggagagcgagctccttggcgccggcggcttcggccaggtgtacagaggcgtgctccggcgccgctccggcgaggcggtggcgatcaagcggatctcgaacgggacacggcaagggatgagggagttcgtcgccgaggtcgccagcctcgggcggatgcgccaccgcaacctggtcgagctgcgcgggtggtgcaagcacgaccaggacctgctcctcgtctacgagttcatgcccggcggcagcctcgatgcgcggctgttcggcacggcggcgtcggcggcggcggcggagggggtgaaagcgccaccgccgccgccgcttctgacgtgggcgcagcggttcgccatcctcaagggcgtcgcccatggcctgctctacctgcacgaggagtgggagcacgtggtggtgcaccgcgacgtgaaggcgaacaacgtgctcctcggcgccggcgacacgggggccgcccggctcggcgacttcggcctcgcgaggctctacgagcacggcgcgacgccggcgacgacgcgcgtggccggcacgctgggctacatggcgcccgagctcacgttcaccagccgcgccacgacggccaccgacgtgttctccttcggcgcgctgctcctcgaggtggcgtgcgggcgccgcccgatcgagccggcggcggcgggggaggcggacggcgacgtgctcctggtgcggtgggtgcgagaccgcgcgctcgacggcgacggcggcggcggcgacgtgctgcgagccgtggacccgaggctggaggggtgctacgacgaggaggaggcgaggctggtgctgtggctcgggctgatgtgcagccaggcgaggccggaggcgaggcccagcatgaggcaggtgtgccggtatctcgacggcgaggagatgctgcaggaggacgccacgccggcggcgatcttctccggcgccgactcgtccgatctcttcggtggctcgttcgtcgtgtccatgacgtcatcctccgccggcggcaccatgtcggccagctcgctgcaaggcggccggtgaactatagaagtatactgtataactatactgtactgaatatgagtgtgttgtgtgtacagtagtgattgctcaaacaaaattcagagaagtgatatggatgtagcccaaacaaaagaatctgaatttttgtctactcctc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0210400, RefSeq:Os06g0210400

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os06g0210400&oldid=11199"