Os06g0211600

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Revision as of 09:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0211600| Description = Similar to Galactoside 2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan alpha-(1,2)-fucosyltransferase) (PsFT1)|...")
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Gene Name

Os06g0211600

Description

Similar to Galactoside 2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan alpha-(1,2)-fucosyltransferase) (PsFT1)

Version

NM_001063655.1 GI:115467041 GeneID:4340464

Length

3353 bp

Definition

Oryza sativa Japonica Group Os06g0211600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:5700640..5703992

Sequence Coding Region

5700650..5700905,5702486..5703927

Expression

GEO Profiles:Os06g0211600

Genome Context

<gbrowseImage1> name=NC_008399:5700640..5703992 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:5700640..5703992 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagagggagagcagcacaccggcgagcagctggctggggatcgacgaggcggcgccgttcgcggggaagaaggcgacgaaggacgccgccgccgccgacgccttcgtccggcgatggcccaaggtggtgaacgccacgctggtggcgttcatcatgacgatgccgccgctcctcatcctcctcggcggcggccggcccggcgcgccggcggtgtggatcaagtcgaccgttgccagcctagccgcacgaggggaacccaagaaagacgtgcttctcggtggcctgctcctcccaggattcgacgagcaatcgtgcgtcagccggtaccaatccgtctactaccgcaagaacatgacgcggccgccgtcgccgcacctcctccgccggctccggcagcaggaggcgctgcaacggcggtgcggcccgggcacggagccgtaccggcgggcgtccgagcggctcaggtccggccagaacgccggcgacgacttcgtcgccacggtcgacggctgcggctacctcgtgctgatatcctaccgcggcctcggcaaccgcatcctcgccatcacctccgccttcctctacgccatgctcaccggccgcgtcctcctcctcgacccgggcaagaccatggccgacctcttctgcgagccgttccaggccacgtcgtggatgctgcccggcgacttcccgctcgagcacttccgggacctcggcgaggacgcgccggagagctacgggaacgtggcggtgaaccggagcggctccgtcgccggcctgcggttcgtgtacgcgcacctcgaccacgcggcgacgccggcgaacaggctgctgtactgcgacgaccaccgccagttcctccaccgcgtgcagtgggtgatcctgaggacggacagctacatcgcgccggggatcttcctcaacccggcgtacaaggaggagctcgacatgatgttccccaacaaggacgccgtcttctacctcctctcccggtatctcctccacccgaccaacgacgtctggggtatggtcaccaggttctaccactcctacctcaagaacgccgacgagcggctgggcgtccagatcagggtgttcgacggcgacgagccgttccagcacatcctggaccagatcctggagtgcacgtcgcaggagcacctcctccctggagtcgtcgtgagcggccacggcggcggcgtcgcgccgccgccgatcgcgcggtccaaggccgtcctgacgacggggctcaactcgtggtaccacgacagcatccgggacatgtactggcggtcgccgtcggccaccggcgaggtggtgagcgtgcaccagccgagccacgagctgcaccagcacttcttccggagcacccacgacatgaaggccctcgccgagatgtacctgctgagcttgacggacaagatcgtcaccagcggctggtcgacgttcggctacgtcggcgccggcctcggcggcctcacgccgtacatcatgatcaagccggagaaccacacggtgccgaacccgccgtgcgtcagggccatgtccatggagccctgcgaccacgggccgccgtacttcgagtgcaccaagaaagagatcgacaagatcatcgacaccggcaacctggtgcctcatgtccgatcatgcgaggacgtgccatggggacgcaaactggctgatcctattagctaa</cdnaseq>

Protein Sequence

<aaseq>MERESSTPASSWLGIDEAAPFAGKKATKDAAAADAFVRRWPKVV NATLVAFIMTMPPLLILLGGGRPGAPAVWIKSTVASLAARGEPKKDVLLGGLLLPGFD EQSCVSRYQSVYYRKNMTRPPSPHLLRRLRQQEALQRRCGPGTEPYRRASERLRSGQN AGDDFVATVDGCGYLVLISYRGLGNRILAITSAFLYAMLTGRVLLLDPGKTMADLFCE PFQATSWMLPGDFPLEHFRDLGEDAPESYGNVAVNRSGSVAGLRFVYAHLDHAATPAN RLLYCDDHRQFLHRVQWVILRTDSYIAPGIFLNPAYKEELDMMFPNKDAVFYLLSRYL LHPTNDVWGMVTRFYHSYLKNADERLGVQIRVFDGDEPFQHILDQILECTSQEHLLPG VVVSGHGGGVAPPPIARSKAVLTTGLNSWYHDSIRDMYWRSPSATGEVVSVHQPSHEL HQHFFRSTHDMKALAEMYLLSLTDKIVTSGWSTFGYVGAGLGGLTPYIMIKPENHTVP NPPCVRAMSMEPCDHGPPYFECTKKEIDKIIDTGNLVPHVRSCEDVPWGRKLADPIS</aaseq>

Gene Sequence

<dnaseqindica>11..266#1847..3288#agtgtccaagatggagagggagagcagcacaccggcgagcagctggctggggatcgacgaggcggcgccgttcgcggggaagaaggcgacgaaggacgccgccgccgccgacgccttcgtccggcgatggcccaaggtggtgaacgccacgctggtggcgttcatcatgacgatgccgccgctcctcatcctcctcggcggcggccggcccggcgcgccggcggtgtggatcaagtcgaccgttgccagcctagccgcacgagggggtaagtgactgtagtttcgtgcttacttgttacaaaggaacccggttgttcttccaacattggagaggaaccttgggtttttcatgttcttcgtgctgctgtgtttgcaaaattacagctcaagcagagctgcagagggactagtctttggaatcagttcttttctaactaagatgcagattctaacttgatttttttgttcatatgtttcatacagaaacattctatatagatattgccttaaaatattaaaagtatctactttttaaatttatattaattaaaaccatattaattatatgttaataattttctcgttttaccatgaacgctgttggaaaatttccatttccaaccgctacatattaggaaatttatttatttctattttttaaaaaaaatattcaatttttttgggaactttactcgattattgatggatagtattttagcatctgattatagtgggctagtgaataataatgggtatcttaagaattgtgtaacatattagaacgcaaagtggaattaaaattatctatatttaaatttttatcttgttaattcttttagtgggatatacatcgataattcaggtggtgccaatgggataattccgcttgcttaccagcctagaccttatcctctttatgtttggggatttgcaaaacccatatccaagtccaacactagacttcataattagttgtgtggtcaaatccattccatactagactttctatgttcactaaagttttactatagactaactttaacgatcctattactctacaccgctattttttaaaaaatattacgtcttgtctcatggcatgataataaagctttgcgactgcttgctttgatcggtgaaacatgtattgtaggcctgtccaaccttcatactgggctaaaagaacccaaggcaaaaattacaagcacggattttatgaggtcttttggggttttcttagttgttttccattttttggatttctgatcataaaatatatcaagccggacgaagtttgaataggtcaattgtattggtttatagtattgtttttgggttgaaatgcaagcccagtgagatgaaaattttcaaaacatgtcaaaatagacatcaccgaacggtttaggtgatatttgaaatctagttgacaaaatttgaacgagattccctacatacatggtacgagagcttgagccaatgtaggtgttgaactactcattttgttcagagatcaaggaccggactactatttggttgatggactaaacatgccaaagctggctaagcttttgtgccacacttcctaaaaaataaagccactttttatttttagtcgatgatatgagggaacggtttatccaccttcctaaaaaagaaagttttaactctaaaattccgtgttcaatccacaccacactcataattttaaaatatttggagagacatctctcccttcaaacctcgttttattttaccttcttgtataagtaaagccagttttgccacactgcatatttcccatgtttacactctttgggcttaaaatgttgctccatttcgcttgaagaacccaagaaagacgtgcttctcggtggcctgctcctcccaggattcgacgagcaatcgtgcgtcagccggtaccaatccgtctactaccgcaagaacatgacgcggccgccgtcgccgcacctcctccgccggctccggcagcaggaggcgctgcaacggcggtgcggcccgggcacggagccgtaccggcgggcgtccgagcggctcaggtccggccagaacgccggcgacgacttcgtcgccacggtcgacggctgcggctacctcgtgctgatatcctaccgcggcctcggcaaccgcatcctcgccatcacctccgccttcctctacgccatgctcaccggccgcgtcctcctcctcgacccgggcaagaccatggccgacctcttctgcgagccgttccaggccacgtcgtggatgctgcccggcgacttcccgctcgagcacttccgggacctcggcgaggacgcgccggagagctacgggaacgtggcggtgaaccggagcggctccgtcgccggcctgcggttcgtgtacgcgcacctcgaccacgcggcgacgccggcgaacaggctgctgtactgcgacgaccaccgccagttcctccaccgcgtgcagtgggtgatcctgaggacggacagctacatcgcgccggggatcttcctcaacccggcgtacaaggaggagctcgacatgatgttccccaacaaggacgccgtcttctacctcctctcccggtatctcctccacccgaccaacgacgtctggggtatggtcaccaggttctaccactcctacctcaagaacgccgacgagcggctgggcgtccagatcagggtgttcgacggcgacgagccgttccagcacatcctggaccagatcctggagtgcacgtcgcaggagcacctcctccctggagtcgtcgtgagcggccacggcggcggcgtcgcgccgccgccgatcgcgcggtccaaggccgtcctgacgacggggctcaactcgtggtaccacgacagcatccgggacatgtactggcggtcgccgtcggccaccggcgaggtggtgagcgtgcaccagccgagccacgagctgcaccagcacttcttccggagcacccacgacatgaaggccctcgccgagatgtacctgctgagcttgacggacaagatcgtcaccagcggctggtcgacgttcggctacgtcggcgccggcctcggcggcctcacgccgtacatcatgatcaagccggagaaccacacggtgccgaacccgccgtgcgtcagggccatgtccatggagccctgcgaccacgggccgccgtacttcgagtgcaccaagaaagagatcgacaagatcatcgacaccggcaacctggtgcctcatgtccgatcatgcgaggacgtgccatggggacgcaaactggctgatcctattagctaaaccaaaatagtagtattaatactgtttttgttcacaatttataccatgtttttagttgtttttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0211600, RefSeq:Os06g0211600