Os06g0219700

From RiceWiki
Revision as of 09:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0219700| Description = Similar to TA2 protein (Fragment)| Version = NM_001063699.1 GI:115467129 GeneID:4340510| Length = 2816 bp| Definiti...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0219700

Description

Similar to TA2 protein (Fragment)

Version

NM_001063699.1 GI:115467129 GeneID:4340510

Length

2816 bp

Definition

Oryza sativa Japonica Group Os06g0219700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:6159837..6162652

Sequence Coding Region

6160160..6160802,6161635..6161945

Expression

GEO Profiles:Os06g0219700

Genome Context

<gbrowseImage1> name=NC_008399:6159837..6162652 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:6159837..6162652 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggagtgcagtgagcacaggtgttgggacgagctactaccggacgcactgggcctcatctttcgcaaactctcactcaaggatgtgctcaccgtggtgccgcgggtttgcaaatcctgggggcgggtggttgcagggccttactgctggcaggagatcgacatccaggagtggagccagcagcagagcaagccggaccagctcaagcgcatggttcgcatgctcgtcgcccgaagcggcggctcgttccaccgcattagcgtgtccggcctgcctggcgatccattgttcaccttcattggggaccatgcacggtcacttaaaaccatggagcttccaaggagtgatatcagcgactccttagtggaaaatgttgcgccaagattgtccaacgttacattcttggacataagcagctgtactaagatcggtgctcgtgctctagaagcattcggcaagcattgtaaatccctgatcggacttcggcgagtcatgcaccctacagatgttgtcggtagggccagtcaacatgatgaggctcgtgctattgcttgcaatatgccaaagctccgtcatcttgagatagggtacatgctcattgcaacgaaggctgttgttgagattgcctctcagtgtcatgatctcaaattcttagatctgcgtggctgctggaatgttgacgataaactattgcaagagagctatcctgggctgaaagtcgttggcccctatgtggacgactgctatgagaacagcttctgggaggagtgttccgatgactcggatgattccatctattgggagctcatggatgatgattattatgcggcggggagcgatgacgagggcatatgggacgatggtcaaggtcttgagggcttagaagtaaggttttatggtggtggatttagtgaaagccatgctggttttgattggccgccatctccatga</cdnaseq>

Protein Sequence

<aaseq>MGECSEHRCWDELLPDALGLIFRKLSLKDVLTVVPRVCKSWGRV VAGPYCWQEIDIQEWSQQQSKPDQLKRMVRMLVARSGGSFHRISVSGLPGDPLFTFIG DHARSLKTMELPRSDISDSLVENVAPRLSNVTFLDISSCTKIGARALEAFGKHCKSLI GLRRVMHPTDVVGRASQHDEARAIACNMPKLRHLEIGYMLIATKAVVEIASQCHDLKF LDLRGCWNVDDKLLQESYPGLKVVGPYVDDCYENSFWEECSDDSDDSIYWELMDDDYY AAGSDDEGIWDDGQGLEGLEVRFYGGGFSESHAGFDWPPSP</aaseq>

Gene Sequence

<dnaseqindica>1851..2493#708..1018#gcatcctctgcgtctctccctcctccctctgcagcgccgagccggaggaatcctgaccggaggtcggcctcgccctcccctcctcgcgcgcgcgccgccgccgccgggaaggccggctggcgaggtgcggtgaccgccccctcctcctcctctccttcccaaccccgccctctcgtgtccatctttttttttgcgccattttatgtgagccacccggtcttgaggattaagctggattggtttcttcccctcgaactgacccatcatccagtttgttgtggatttctttgatgcgttgtgtagtactcgtagtcgtagcagcctgtgttcctcgagaaattgggggttcaactgaacctcgtgtccgcaggaaggggatgggattttttttttaatttgctgttagtttttttggattcttagtatttgcctctttattgtgggattttttttctctgccattttcttcctatgaattgcgtatagcatgtgtttcatccaataaagttattaagaaaactataatttttagcactgtgttcaccgacacaaggaggggaagaaatcgaggccgtttaattataaaatccttagtaaatcacttaaattttgtgaattttaaggttaatcttgctagaaaattacttaatctttgttcttggcacaggtagtcgaaaaatatcgcctctgaaggtcagcactgaggcatgggggagtgcagtgagcacaggtgttgggacgagctactaccggacgcactgggcctcatctttcgcaaactctcactcaaggatgtgctcaccgtggtgccgcgggtttgcaaatcctgggggcgggtggttgcagggccttactgctggcaggagatcgacatccaggagtggagccagcagcagagcaagccggaccagctcaagcgcatggttcgcatgctcgtcgcccgaagcggcggctcgttccaccgcattagcgtgtccggcctgcctggcgatccattgttcaccttcattggggaccagtaagtagagttaatcaaaatcattttatcatgtgtggtcctttccttcattgcagaggttagatcgcttgaatggaaacggtacgataccttataaccagacggttgcacatgaatttgctagagaattagacagttaatttacatctcatcattgcataatgcgctgggccgtttgctcaagagatggcctacattgccatgggatgcattgataggtaatatatgatttgtgaagctgcatgatatgaactggatcacggggatacagtatcctctatcctctttgaattgacaaggggcagcgtgtgttctggatcatcttgattaggtagacatatgctaaggtgtttccttttatttatttatcttcacacattaaacttcaatcaatatgtgctagatttggccgtgtccaaacaactatgccccatgtatgttttggggattaatgctgtcaaattctgcccatccaaatcacatcagtacaaacagaaaagacttcagtttattaaggtctatcagttgccaaaatagtactagtgatccttgccttttaaattgtctgtagattgattatgatgtatgctgaaagcagcaatacagtatcctgtacattcccccaccacgtcgtgtgtaccattaactgatttagtacatattctcaattggaatatttttactgcacaagacatatccattttggcatatccggtgagccttccatctataaacctgaaataacgggggtatgcagtacataattcttgtgatttattagtgatcctacttcattatgttttgtttgatagtacttatttgcttttgcaagtgcacggtcacttaaaaccatggagcttccaaggagtgatatcagcgactccttagtggaaaatgttgcgccaagattgtccaacgttacattcttggacataagcagctgtactaagatcggtgctcgtgctctagaagcattcggcaagcattgtaaatccctgatcggacttcggcgagtcatgcaccctacagatgttgtcggtagggccagtcaacatgatgaggctcgtgctattgcttgcaatatgccaaagctccgtcatcttgagatagggtacatgctcattgcaacgaaggctgttgttgagattgcctctcagtgtcatgatctcaaattcttagatctgcgtggctgctggaatgttgacgataaactattgcaagagagctatcctgggctgaaagtcgttggcccctatgtggacgactgctatgagaacagcttctgggaggagtgttccgatgactcggatgattccatctattgggagctcatggatgatgattattatgcggcggggagcgatgacgagggcatatgggacgatggtcaaggtcttgagggcttagaagtaaggttttatggtggtggatttagtgaaagccatgctggttttgattggccgccatctccatgaaagctgcatcaagatcttcagaaaagtgcctgtgtattcctgctgcttcctcttatgtgcttcaagttttaaacatcagcttccttagtactagtatgtgcttgtatttgtgtcatcccctagcttgcagatatttgaagccaactatctggtagtataaaatgtttggtgtttatacataaaaaatagcaacatggtctggtagtactgaaacaatgttgctacaaatttgtttcagtactagtaatttatttcagaggttttccatgcgcctgtaatcctgtactagttctcttttatactgcggttctatgacttctact</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0219700, RefSeq:Os06g0219700