Os06g0221100

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Revision as of 09:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0221100| Description = TLDc domain containing protein| Version = NM_001063710.1 GI:115467151 GeneID:4340521| Length = 3975 bp| Definition ...")
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Gene Name

Os06g0221100

Description

TLDc domain containing protein

Version

NM_001063710.1 GI:115467151 GeneID:4340521

Length

3975 bp

Definition

Oryza sativa Japonica Group Os06g0221100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:6242744..6246718

Sequence Coding Region

6242953..6243036,6243124..6243208,6243342..6243429,6243528..6243591,6243680..6243760
,6244893..6244965,6245055..6245569,6246352..6246468

Expression

GEO Profiles:Os06g0221100

Genome Context

<gbrowseImage1> name=NC_008399:6242744..6246718 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:6242744..6246718 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtacctgccgtcgctgggcgggaaggcggcgcacctggtgtccgacctcgccaccgtcatcctcaaccccgtctccgagcgggagagccagcgccacccctcccacctccccgaggccactgaagtgcaagaaaatatctatgaggatgacgatgatgataattcagtcaagaattctgagattcctaatggccctgacacatcttccttcagagcattcctgatgtcatttatgtcgtcatcaaactccagcagtgattctatagaaatcatacctgagcacaatatgaatatggaatatccaactttaacacctgttgggaagggaagcaatggaaggaagggcctgtttagcagagggaagcattccattggaaaaatcattaacaaagcaggcagaattggtggtttcagacaaaaacccagctacagcattgatggtgaaactgttcaaacagaatatgatgcacctgggttggaacttaagggatcaaaggaatctgcttcacatgataagttaccagccatgtctgaaccatcaatgcttttgtctgaaacaatgcgaactgttctttatacatctcttcctgtacttgtccaaggaaggaactggatgttggtatacagtacctggagacatggaatatctttatctactctgtatagaaggagcatgctttgtgcaggctactcacttttgatagttggggatcgaaaaggagcggttttcggtgggttggttgaggccccattgcaaccattaataaaaaagaagtatcaggggaccaacaactgctttgtgttcaccaatatagctggccgtcctgttatatatcgtccaacaggtgctaataactatttcacattttgctccaccgattatttggcaatgggaggtggtggtcactttgcactttatcttgatggagaccttctgaatggttcaagttccacttcagagacatttaacaacccgtgcttatcacgttcccgggagtttgaagtcaaagatgtcgagctatggggcttcgtcaatgcttccaagtatgatgagatgctcactatctgccgtactgagaagcaagggatctggaatctgtga</cdnaseq>

Protein Sequence

<aaseq>MGYLPSLGGKAAHLVSDLATVILNPVSERESQRHPSHLPEATEV QENIYEDDDDDNSVKNSEIPNGPDTSSFRAFLMSFMSSSNSSSDSIEIIPEHNMNMEY PTLTPVGKGSNGRKGLFSRGKHSIGKIINKAGRIGGFRQKPSYSIDGETVQTEYDAPG LELKGSKESASHDKLPAMSEPSMLLSETMRTVLYTSLPVLVQGRNWMLVYSTWRHGIS LSTLYRRSMLCAGYSLLIVGDRKGAVFGGLVEAPLQPLIKKKYQGTNNCFVFTNIAGR PVIYRPTGANNYFTFCSTDYLAMGGGGHFALYLDGDLLNGSSSTSETFNNPCLSRSRE FEVKDVELWGFVNASKYDEMLTICRTEKQGIWNL</aaseq>

Gene Sequence

<dnaseqindica>3683..3766#3511..3595#3290..3377#3128..3191#2959..3039#1754..1826#1150..1664#251..367#cccttctgaccctcctgacctccccgagccccaacacgacgacacggagcacaaacctcccgcgcctcaccacttcccctcgcctccgccgcccccacttggccacatctcctccggtctcggtccccgcggcggcggcggcggaggagctcgcccatgttgttccgcggacttctcgcttgggctgtcgggtagggaaccctgagaaaacgcataccggcggtcgcggagagcagagcaaaggcgggggatggggtacctgccgtcgctgggcgggaaggcggcgcacctggtgtccgacctcgccaccgtcatcctcaaccccgtctccgagcgggagagccagcgccacccctcccacctccccgtgagcgcctaaccctcccccctccctcccttccttctcggtagatttgctcgtccccaaattctagctcagtttctgcgggtctgcccttgctgctcttagtccgtgcgataggccgattggcgagcagagctgggtactccggttagagatgagatcatggtgcagaggggcctgcatcttggtggaattgctgtttgtcgtccatgggttctactagggtttgaggggcttgcagtctcctatttgtcgtgaactgtgatgctaacaagtagccgagacattgggtatgatacggggttctattgttgatctagttcgtcaagggtaataaagtagtggatgttaatttaaagtagagcaatggtatgcgccgtgttgcacctgagtggaattagaccaagatggcactatagcagtgtgcctttagacaacacagtcatggattatcgctagttaatagctatgtgcctatgttcgatcgggtgcttgaaaatggagggcactgaccctgagaacagaaattgtttcaccttaatgtctttttttcagttttatgtgatgttttggtttgtgagttgtttgtttcacacgagttgcccttctgagacgagctgcattgtcataagtttaaagtggcagtctattcaaaagaaaagaaactgaagctacaaactgtgatgaattggtttgtttgtgagcaattgacaactagaatgccagtttcatttcgttggccatagcatggttagaaagcttaaaattgtctttatctcttgtaggaggccactgaagtgcaagaaaatatctatgaggatgacgatgatgataattcagtcaagaattctgagattcctaatggccctgacacatcttccttcagagcattcctgatgtcatttatgtcgtcatcaaactccagcagtgattctatagaaatcatacctgagcacaatatgaatatggaatatccaactttaacacctgttgggaagggaagcaatggaaggaagggcctgtttagcagagggaagcattccattggaaaaatcattaacaaagcaggcagaattggtggtttcagacaaaaacccagctacagcattgatggtgaaactgttcaaacagaatatgatgcacctgggttggaacttaagggatcaaaggaatctgcttcacatgataagttaccagccatgtctgaaccatcaatgcttttgtctgaaacaatgcgaactgttctttatacatctcttcctgtacttgtccaaggaaggaactggatgttggtatacaggttagaacttctgcaaccaaatatgtccagatcattatcatattggctatatacatgattgtctactatctattttgacaattgtgcagtacctggagacatggaatatctttatctactctgtatagaaggagcatgctttgtgcaggctactcacttttggtgtgtccatactttctttttatatagtttttactatttatccttgcatgaagcccagtcgctctgcttttgcttatttcgttgtattctgtaaatgatgcataagcttagagtctttgacaaatatttctgctatatcatgttattgtggcattctcaaataaataaaactgccaccttgctggtggtcagaaccttgcgatctaattttgaataaccagatggcggatgtctaggtgttttccatattttattgtgttgtatacagtggacatcagtaagcctaaatgctgttgtcacaattttcttagcctgataactcatctactaacagatagttgaaaattttctgatgttggtagtggttcatgcgattagcaagcattgctctatccaaagatttgattgtatacaacactttctagcatgttcaattcaaagaatgatcatgcgtttatgattgccttttagtagtaaaatatagatgactctgttatactgttatttattgctaccattgaaatgctattttctatgtataatcctatcgaaagtagtattattatattgtaagtcaagagcatggtaattatgcctgatggatgaattattaaaaggagatggcaaccttatgaattcatgaatactctgtgtaccgctcatggattaaaacaaattattttttatttgactgtacatagagttcttagtgcttgtgagcaacatttaggatctgctattgatattgctctgcctagataatctggcttccacagttccactgaagcatcccatttatttacatagaaagaaaaatgagttgtcaacatcttttattttctgagcaaacattttcactccagggcctgaatttgtaggtactgcaaatctggaccttttttatgtagaaattattgtctggaacatatggtccttgttgaaattttgtggaaaacctcatatccactcaaatagatgattttttccttccccaacaaattcctatataatccctaccttcttttttggggctaagcactcttattatttcacctaggcatagtgctcctctaggctctatatttctgcagatttggttgctgatatccacactgcttatgtgatgtggcagatagttggggatcgaaaaggagcggttttcggtgggttggttgaggccccattgcaaccattaataaaaaagaagtatcaggtttgcagcacataggccggtaacttttttttcttctgatgtcttattcaatctttgcactgattgtagtctatatttaatctttcaggggaccaacaactgctttgtgttcaccaatatagctggccgtcctgttatatatcgtccaacaggtactttatacctatttcttccacaggatttgcatcgatggaacatcatgtgctcctaaatttgcttccttgggattattctgaattttgaactgcaggtgctaataactatttcacattttgctccaccgattatttggcaatgggaggtggtggtcactttgcactttatcttgatggagacctgtaatgtctatccttccctgccaccttttcacacaaaacttccagttttagcatatatctttcattccatgtttgcatgcagtgctaactgccacctaagcctgtgtgtaaccacacacatttacctttgcagtctgaatggttcaagttccacttcagagacatttaacaacccgtgcttatcacgttcccgggagtttgaagtcaaagatgtcgaggtacgctatctaccgccatgccatacccttcaattttcatcatatctcttgatgagatctgatagtgataacttttaccaaattcagctatggggcttcgtcaatgcttccaagtatgatgagatgctcactatctgccgtactgagaagcaagggatctggaatctgtgactgtctgtttacaattgatctgagctgtttagtgcttgtacctgatgccaacccatcctggtggtttgtacagttttgtagttctgtctgttaagtatagtatatataggccttgttggagttctgtctgtatgtatagtaaaatgccccttgtaaaacaagttcatcaacggagttatggagcttaaaatgagtaactctgaaacatg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0221100, RefSeq:Os06g0221100