Os06g0226600

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Revision as of 09:11, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0226600| Description = TB2/DP1 and HVA22 related protein family protein| Version = NM_001063739.1 GI:115467209 GeneID:4340552| Length = 355...")
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Gene Name

Os06g0226600

Description

TB2/DP1 and HVA22 related protein family protein

Version

NM_001063739.1 GI:115467209 GeneID:4340552

Length

3557 bp

Definition

Oryza sativa Japonica Group Os06g0226600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:6558806..6562362

Sequence Coding Region

6559240..6559374,6559921..6560161,6560463..6560585,6560685..6560711,6562138..6562193

Expression

GEO Profiles:Os06g0226600

Genome Context

<gbrowseImage1> name=NC_008399:6558806..6562362 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:6558806..6562362 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtctggatctttcctcaagctgctggccaacaacttcgacgtcctcgccgggccattagtttcacttgcttatccattatatgcctctgtgagagcaatagaaacaaaatctcctgttgatgatcagcaatggctcacttactgggtgctgtactcgtttatcactttgtttgagcttacttttgctccagtaattgaatggcttcctttttggtcctatgcaaagttgttcttcaactgctggttggtcttaccttgcttccatggtgctgcttatgtttatgatcactttgtgcggccaatgtttgtgaatcgtcaaatagtaaatgtctggtatgttccaagaaaagaaaacctgagtaaacctgatgatgtgctatcagctgcggagagatatattgaacagaatggaccagaagcatttgagaaactcatcagcaagtctacgaggccttcaacctccaaaagaagcacaaagcaatctatcttggaggaggtagaatctgaacacatggccagggctgaaagagaatcatggggcgaaaatccattctatgataaaaattatcgatgctag</cdnaseq>

Protein Sequence

<aaseq>MGSGSFLKLLANNFDVLAGPLVSLAYPLYASVRAIETKSPVDDQ QWLTYWVLYSFITLFELTFAPVIEWLPFWSYAKLFFNCWLVLPCFHGAAYVYDHFVRP MFVNRQIVNVWYVPRKENLSKPDDVLSAAERYIEQNGPEAFEKLISKSTRPSTSKRST KQSILEEVESEHMARAERESWGENPFYDKNYRC</aaseq>

Gene Sequence

<dnaseqindica>2989..3123#2202..2442#1778..1900#1652..1678#170..225#agcggagagaaaggaggagaaaagtagtaaagaggaaaggggggagtgagtctcccgagcaacggctctccactactagcccacagctcccaagaatctctgccatttcttgagctggtcgatccatcggggagggagagaggtcgaggaggcggcggaaggggagaggatggggtctggatctttcctcaagctgctggccaacaacttcgacgtcctcgccgggtacgggcggggtttcttcttccttcctcttcttgatttcgttcgccgccgattcgttggctgtggctcgtcgatgtcgatttggtggtggttcttggttgatgatgtgtggggatttgggagaagaacgaggggggatgtggggaaagttggggggagaatctttgggcggtttttgggtcgtcgtgggaggatcgaggacgcgtttgactcatttagggatctttctggcgctagaaaataggcctaaatatatttcggagaaatggaatatggggcgtgttattcatttgaggatcctcctttgaatttgtttgtaggacagtatggcagtaggtgttatggtacatgtgaaattggtattaggcgtgagagttgcgagggaaagattcttcgtatctgcgtatgattatgcagtgcatggtggtcgtggaatggaaatgaacttcactgcataaagcgaccaatctttagaacttgtcgtatgatttgtggaactttagcaagttagaatatgattatttggagaaatggtaggcttatttttgttacaaaaattttaccaacagctactctcatctgagttcctatttacgatgctgaatgaaacttcactattggtaaaggttttataagatttttttttgtgtgtatactattgctccattgtttattatgaagtcaatccaaaggccatttttttatgggtgactaatggagcagagttcagcatagtatcataacagtcaatgtcctaatatcaacatggaatggatatccttgtagtgatgcttcctctggaagcatgaaataatcttatttgtgtagtagtactatcatgcattgctgagtcagtagttttgatatgcacaacttggttagttatcaaactggtggcttacatgctgtgctaccatgcagttggggataatagaaatggatgttcctgaggaaaaaagtataagataaacatttttactaattgtttgtcgactgctgggtctcatgaaaatccaaaaattagcttgcccatggcaggaaattctgcagtgatattagttgatgttgggtagcagacaagatgaaatttgaattcctatttttctgcaaaagcagcttcattgaactatctgctctgctgtcatgtgaactacaatattgtctgttattttttttattatcatggtaagctggggtctttatgtgcattgtaatttgttgttttgagaaagtaatagaaaaaatgcctcttggttaactatagtgcaatgtgatcagtgatcatgacatgcattatctagagattatgaaaaaacttcgagagcaggtggtctttattatgaaaaaacttaaaacatattgtttttgttaattatatatttgaagctattggttctgaggcaattctgttgttttacctttgcaggccattagtttcacttgcttatccattgtaagtattattttgttgtaattcaatattttgccattttgattgtttgattatttctgttattatatatatatatatttacttttcgcacttctgcagatatgcctctgtgagagcaatagaaacaaaatctcctgttgatgatcagcaatggctcacttactgggtgctgtactcgtttatcactttgtttgagcttacttttgctccagtaattgaatggtaatgaccattttcctgggtcaggagattttttttttgtcttactcatttccttttgtttagcatttgatttccctcaaaaagttcagatttagcaacatagcctgtgagtcccttgcagcagggagttcataatatagaagaccaataaaacaggattggccctggtctagtgttttccttgttttttgtggtaatatttgtgattttttttttactattgatgctggagataaacatgttcacacatcaagaggataacaaaggattagatatgcttacttctgacggttgcttgcaggcttcctttttggtcctatgcaaagttgttcttcaactgctggttggtcttaccttgcttccatggtgctgcttatgtttatgatcactttgtgcggccaatgtttgtgaatcgtcaaatagtaaatgtctggtatgttccaagaaaagaaaacctgagtaaacctgatgatgtgctatcagctgcggagagatatattgaacagaatggaccagaagcatttgagaaactcatcagcaaggtattcttgttcaaaactaaaatcatcacaactattagggaaatgcaactctagtatatggatgttcatgctttattccatccctccaaagtgtttgaggtctatgcgaggactttaaaataaatataacatgagatgttgatttgaatttgaaagtttgcatcaacctcaaggaaaacaaatgtacagggatggtgcatatattatcttttatgcagcaatatatttctaaacggtacctctaatcaatgcaaggcagctgtacttctatgtatggtctcattttctagtgcttgctgcttgtcaacattctaatctgatcattggtaacatcaagcaattattatttggtgtaacataggctgtcaattttcctttcttctgagtgctttccttagtattttccaggaatgctttttaggtgttcctccatcactgtataattgctacagatatcatactttttactttcgttaggcatgttggtttatctcatctttacgttgctcctctttcttaacctatgcttattcactcttgttgcagtctacgaggccttcaacctccaaaagaagcacaaagcaatctatcttggaggaggtagaatctgaacacatggccagggctgaaagagaatcatggggcgaaaatccattctatgataaaaattatcgatgctagaacaatctgttgttcacgaccacatactcatcaggttagcataacgtttaccaccaattatagtatttgcacttgtggtacctggcaaaatctaggatcacatgtggtcttacagagttacacctctacttcccaggttgccggcttatctgggttgaggataaagctttccatgtatctgacttcaggatttgtactttgatgcatcatgcatccactgaatgtcattcagtcccagttcccagaaccaattgtgcattggctgaactattgtaaataggtgctagtgttgacaatatcccttagttcttaaatgatgttatgtaattctgttaatctgccttgcgtggtagtgacaacctctggacttggttggcagttatatttttcccttcttggagaagggccagaattcaaaaatagtcctgatatct</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0226600, RefSeq:Os06g0226600