Os06g0238000

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Revision as of 09:12, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0238000| Description = U box domain containing protein| Version = NM_001063789.2 GI:297605480 GeneID:4340611| Length = 1939 bp| Definition...")
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Gene Name

Os06g0238000

Description

U box domain containing protein

Version

NM_001063789.2 GI:297605480 GeneID:4340611

Length

1939 bp

Definition

Oryza sativa Japonica Group Os06g0238000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:7180649..7182587

Sequence Coding Region

7180703..7182259

Expression

GEO Profiles:Os06g0238000

Genome Context

<gbrowseImage1> name=NC_008399:7180649..7182587 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:7180649..7182587 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaccgcctggccacggtggcggccgtcctcgccgccgatgccgtcctcgtcgtcgtcgtcgccgtcgtcgtcgttcacggcggacccgccggcggagttcctctgcccgatctccgggacgctgatggcggacccggtggtcgtcccgccggggcagacgttcgagcgcgcctgcatccaggcgtgcgccgcgctcgccttctccccgccggccgtcgccgccgacctctcctccctcccgccctccgcctcctcccctctcgtcctcgtccccaacgtcgcgctccgcaccgccatactcaactggtgcgaccgcctctccctcccctaccccgcccctctctcccccgacaccgcgcgcgacgtcgtccgccgtctcatgccctcgccaccgcctcccccgccgaggtcgcaggcgccgccgcccccgccgccggcctcctccgtccggacgaggagctactacagcgacgacctcgtgcagcagcagcaggaggcgaggcgggagggtgggtctacggaggagaggatcatggccatgctcggcgctggccccgcggagcaggaggcggcgatggcgttgctgcggaagatggcgcgggagaacagggagatgcggagggagctctgcacgccgcggctcctcgccgcgctccgcccgatgctgctgtccggggacgccggggtccaggtcaacgcggcggcggcgctggtcaacctgtcgctggaggcggagaacaaggtgcggatcgtgcggtccggggcggtgtcgccgctggtggaggtgctccgcagcggccacccggaggcgcgggatcacgccgcgggcgccgtatacagcctcgccgtggaggacgagaaccgcgcggccatcggcgtgctcggcgcgatcccgccgctcctggagctcttcgcgtgcgccggcgccgcccacctcgcccgccgcgaggccggcatggcgctgtaccacgtctccctctccgggatgaaccggtccaagatcgcgcgcacgccgggggtggtgcggacgctgctcgccgcggcggaggcggcgagggacgaccgcgccaacgaggccgacgccgccgccctccgcaggatcgccgtgatgatcctcgcgaacctcgccggctgcccggacgggaggaccgcgctgatggacggcggcgcggtggccgccgtggtgaggctgatgagcagcggctccgccgcgccggggagcgcggaggaggagtactgcatctcgtcgctgtacgggatgagccgggggagcctgaggttccgagggctcgcgcgcgccgccggcgtcgaggccgcgctcacgccggtggccgagggcgccggcggcgtgggccgggacatggcgcggcggacgctccgggcgatgcgcggggaggacgacgaggcggcggtcacggccacggggctgctcggccggcagtgggacgacgggagcgtcgtgtcggaggggctcgtgtcgatccggcggccgccgccgcgccggagcagctacggcgccggggcgtccgggtcaaacaccacgcagttctga</cdnaseq>

Protein Sequence

<aaseq>MATAWPRWRPSSPPMPSSSSSSPSSSFTADPPAEFLCPISGTLM ADPVVVPPGQTFERACIQACAALAFSPPAVAADLSSLPPSASSPLVLVPNVALRTAIL NWCDRLSLPYPAPLSPDTARDVVRRLMPSPPPPPPRSQAPPPPPPASSVRTRSYYSDD LVQQQQEARREGGSTEERIMAMLGAGPAEQEAAMALLRKMARENREMRRELCTPRLLA ALRPMLLSGDAGVQVNAAAALVNLSLEAENKVRIVRSGAVSPLVEVLRSGHPEARDHA AGAVYSLAVEDENRAAIGVLGAIPPLLELFACAGAAHLARREAGMALYHVSLSGMNRS KIARTPGVVRTLLAAAEAARDDRANEADAAALRRIAVMILANLAGCPDGRTALMDGGA VAAVVRLMSSGSAAPGSAEEEYCISSLYGMSRGSLRFRGLARAAGVEAALTPVAEGAG GVGRDMARRTLRAMRGEDDEAAVTATGLLGRQWDDGSVVSEGLVSIRRPPPRRSSYGA GASGSNTTQF</aaseq>

Gene Sequence

<dnaseqindica>55..1611#agcgcatccaagcaaacaaaccaatcacacgagacgcagccgacgaacgcgtccatggccaccgcctggccacggtggcggccgtcctcgccgccgatgccgtcctcgtcgtcgtcgtcgccgtcgtcgtcgttcacggcggacccgccggcggagttcctctgcccgatctccgggacgctgatggcggacccggtggtcgtcccgccggggcagacgttcgagcgcgcctgcatccaggcgtgcgccgcgctcgccttctccccgccggccgtcgccgccgacctctcctccctcccgccctccgcctcctcccctctcgtcctcgtccccaacgtcgcgctccgcaccgccatactcaactggtgcgaccgcctctccctcccctaccccgcccctctctcccccgacaccgcgcgcgacgtcgtccgccgtctcatgccctcgccaccgcctcccccgccgaggtcgcaggcgccgccgcccccgccgccggcctcctccgtccggacgaggagctactacagcgacgacctcgtgcagcagcagcaggaggcgaggcgggagggtgggtctacggaggagaggatcatggccatgctcggcgctggccccgcggagcaggaggcggcgatggcgttgctgcggaagatggcgcgggagaacagggagatgcggagggagctctgcacgccgcggctcctcgccgcgctccgcccgatgctgctgtccggggacgccggggtccaggtcaacgcggcggcggcgctggtcaacctgtcgctggaggcggagaacaaggtgcggatcgtgcggtccggggcggtgtcgccgctggtggaggtgctccgcagcggccacccggaggcgcgggatcacgccgcgggcgccgtatacagcctcgccgtggaggacgagaaccgcgcggccatcggcgtgctcggcgcgatcccgccgctcctggagctcttcgcgtgcgccggcgccgcccacctcgcccgccgcgaggccggcatggcgctgtaccacgtctccctctccgggatgaaccggtccaagatcgcgcgcacgccgggggtggtgcggacgctgctcgccgcggcggaggcggcgagggacgaccgcgccaacgaggccgacgccgccgccctccgcaggatcgccgtgatgatcctcgcgaacctcgccggctgcccggacgggaggaccgcgctgatggacggcggcgcggtggccgccgtggtgaggctgatgagcagcggctccgccgcgccggggagcgcggaggaggagtactgcatctcgtcgctgtacgggatgagccgggggagcctgaggttccgagggctcgcgcgcgccgccggcgtcgaggccgcgctcacgccggtggccgagggcgccggcggcgtgggccgggacatggcgcggcggacgctccgggcgatgcgcggggaggacgacgaggcggcggtcacggccacggggctgctcggccggcagtgggacgacgggagcgtcgtgtcggaggggctcgtgtcgatccggcggccgccgccgcgccggagcagctacggcgccggggcgtccgggtcaaacaccacgcagttctgaaaagtcaaagtcttcgcttctcttcttttatttctttcttttttatttctttttttttttgctggctcttgttgaagtatttggaactgtatttgccataggccccaaaaaatctggtggttaactacttctgatgaatggtgttggtgtaattggatggtggattcttttgttggaattaagctgtaatttaattggatctttgcacatgttaaattctttatgactgaatagtggaacctagaactgtgacacctatccaaattaggtctgtacattaatccatcggttctcttagaaggtatgtatgtatgtatgtgttactggg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0238000, RefSeq:Os06g0238000