Os06g0239500

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Revision as of 09:12, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0239500| Description = TGF-beta receptor, type I/II extracellular region family protein| Version = NM_001063796.1 GI:115467323 GeneID:434061...")
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Gene Name

Os06g0239500

Description

TGF-beta receptor, type I/II extracellular region family protein

Version

NM_001063796.1 GI:115467323 GeneID:4340618

Length

3115 bp

Definition

Oryza sativa Japonica Group Os06g0239500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:7246885..7249999

Sequence Coding Region

7246924..7246993,7247067..7247284,7248207..7248742,7249099..7249882

Expression

GEO Profiles:Os06g0239500

Genome Context

<gbrowseImage1> name=NC_008399:7246885..7249999 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:7246885..7249999 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggggaagaagccgacggcggcgccgccgacggcgaggctgagcagggcatgcgtgatgatcatagtggtggcgagcgtggagaggttcgcgtacaagggggtggcgtcgaacctggtgacgtacctgacggaggtggtggagatgagcacgtcggcggcggcgaagagcgtcagcgcgtggagcggggtgacgtccatgctgccgctcctcaccgccgtcctcgccgactcctactgggaccgctactccaccatcaccgcctcctccctcctctacgtcgtcgggctaataggcctaactttatgggcactgctacacacacggatgccatgctccacgctcttcttcccgctctacctcatctccatcggccaaggcggctacaacccttcgctgcaagccttcggcgccgaccagctcgacatcggcgacgacgacgatgacggcgacaatggcgcaacagcagcaacagaagagcagaggagcaaggtgaagagcctcttcttccagtggtggtacttcggcatctgcagcggcagcctgctggggaacacgacaatgtcgtacgtccaggacaccgtcggctggggcctcggcttcgccgtcccggccgccgtcatggccgtctccgtcgccgccttcttctgctgcacccccctctacaagcagaggcaacccagagctgttcatcgcaagccctgtcgtgacagcgtcctcaaagccctgaaatcgcttctcgcaagtgtcactggcgccagaaagatcaccctgccatccagagacggcgacgatgacactgacatcgtatctgagctagagttgcaggagaagccactgaagctggctgatcagaagcaggaggcggccatgggagaggctgcagcaccaagtgtagccaagatcatagtgaggctgctcccaatctggacgatgctgctcatgttcgcggtcatcttccagcagccgatgacgttcttcaccaagcaggggatgctgatggaccaccgcgtcggcgccgtgttcgtgatccccccggcgatgctgcagagctccatcaccgtctccatcatcctcctcatgccgctctacgacacggtggtggtgccgctcgccggcctcgtcgccggccacggcaaggggatcacggtgctccagcggatcggcgtcgggatggtgctctccatcgtcgccatggcggtcgccgcgctcgtcgaggcgcgccgcctccgcgccgccgcgtcgtcctcgtccggcggccgcctgagcatattctggctcctcccgcagtacgtgctcctcggcgtctccgacgtgttcacggtggtgggcatgcaggagttcttctacacccaggtccccagcgccatgaggaccgtcggcatcgcgctctacctcagcgtcttcggcgtcggcagcttcgtcggcgcgttcctcatcaccgcgctcgagatggtgacggcggggggcggcggcggcgggcacgatcacgggtggttctccgatgatccccgggaggcgcggctggacaagtactactggttcttggcgctcctcagctgcgtcagcttcgtcgtcttcacacacttgtgcaagtactactag</cdnaseq>

Protein Sequence

<aaseq>MSGKKPTAAPPTARLSRACVMIIVVASVERFAYKGVASNLVTYL TEVVEMSTSAAAKSVSAWSGVTSMLPLLTAVLADSYWDRYSTITASSLLYVVGLIGLT LWALLHTRMPCSTLFFPLYLISIGQGGYNPSLQAFGADQLDIGDDDDDGDNGATAATE EQRSKVKSLFFQWWYFGICSGSLLGNTTMSYVQDTVGWGLGFAVPAAVMAVSVAAFFC CTPLYKQRQPRAVHRKPCRDSVLKALKSLLASVTGARKITLPSRDGDDDTDIVSELEL QEKPLKLADQKQEAAMGEAAAPSVAKIIVRLLPIWTMLLMFAVIFQQPMTFFTKQGML MDHRVGAVFVIPPAMLQSSITVSIILLMPLYDTVVVPLAGLVAGHGKGITVLQRIGVG MVLSIVAMAVAALVEARRLRAAASSSSGGRLSIFWLLPQYVLLGVSDVFTVVGMQEFF YTQVPSAMRTVGIALYLSVFGVGSFVGAFLITALEMVTAGGGGGGHDHGWFSDDPREA RLDKYYWFLALLSCVSFVVFTHLCKYY</aaseq>

Gene Sequence

<dnaseqindica>40..109#183..400#1323..1858#2215..2998#aaagtcgagccgccacaaattgtgattctctgatccgtcatgtcggggaagaagccgacggcggcgccgccgacggcgaggctgagcagggcatgcgtgatgatcataggtaatagtaatgcaagcgagctcgatgtttcatggtgatccatggtgaggttgagctcgtgcatggtgtgcagtggtggcgagcgtggagaggttcgcgtacaagggggtggcgtcgaacctggtgacgtacctgacggaggtggtggagatgagcacgtcggcggcggcgaagagcgtcagcgcgtggagcggggtgacgtccatgctgccgctcctcaccgccgtcctcgccgactcctactgggaccgctactccaccatcaccgcctcctccctcctctacgtcgtcgtaagctattctgataatctttctcttgttttgattttcataatggaaatggtttacgtatccagactctacgaacaggcgcacagccaatcggtttcaatctcttcttctttttcttctcattccctgttcagttcagggttggaaattttggactggaatttctgaaaattccgaaatttcggtcatttcggacccctccgatacaatattatttcggtcgaaatttttcaatttttttaaaatttttcatgaattttcttaatatttgttcaaattcaactaaattttgtttcagaccgaaattttggatattccggtgtttcggtgatgcccgaacaaatcggctaaaccgaaaagtttaaccctggtttagtttgctgattggccctgtgttcttaacttaacttcttatgttgtttgattttagcctatttcggagttgttttacaatagtctgagactttggttggattaggaaatatgaatcaatctgtccatttctgcaccttgtagttgtagtcaggaaaccttattttgtacaaattattggagcaagagccaattaggacgagatggaggaggttgcaccaatgtggggtacaataattgattcatttttagttactgcttactagtagcatggaacaaaattgcttcaggacaggagctattttgcaaatgcagacagttgctgcagcttctgatgatccaggacagagacatcacaattaaagaacaattcagtagtaagaagtagtaacgtgtaacaaccagcaccatgacacatactcagtaaaaagaatcagccattcaattacaaaacatatcctgatataacacttgaagaaagaaaccaacttagtttacttttactgtagtaactcatcttactgatactgtattactgttcaatcaccaggggctaataggcctaactttatgggcactgctacacacacggatgccatgctccacgctcttcttcccgctctacctcatctccatcggccaaggcggctacaacccttcgctgcaagccttcggcgccgaccagctcgacatcggcgacgacgacgatgacggcgacaatggcgcaacagcagcaacagaagagcagaggagcaaggtgaagagcctcttcttccagtggtggtacttcggcatctgcagcggcagcctgctggggaacacgacaatgtcgtacgtccaggacaccgtcggctggggcctcggcttcgccgtcccggccgccgtcatggccgtctccgtcgccgccttcttctgctgcacccccctctacaagcagaggcaacccagagctgttcatcgcaagccctgtcgtgacagcgtcctcaaagccctgaaatcgcttctcgcaagtgtcactggcgccagaaagatcaccctgccatccagagacggcgacgatgacactgacatcgtatctgagctagagtaagatttttgttctgtttcgataaactttaaaatcacctgaattctgattttgcttagagagcaattttacagtccttgaggagatatcatggatttggtacctcatagtatctagataataagaggtatcaaatttgcaaaagaaaaaaatggtacgttatggtccctgaaggactgtaaaattgctcttatttggaacatttacttggaatttggttgtagaattatggatgagagatgtgaaattttgaaatgcaggttgcagaaatcacctgaattctgatattattcggaacaagtactaggaatttggttgtagaattgtggatgagaggtgaatttttgaaatgcaggttgcaggagaagccactgaagctggctgatcagaagcaggaggcggccatgggagaggctgcagcaccaagtgtagccaagatcatagtgaggctgctcccaatctggacgatgctgctcatgttcgcggtcatcttccagcagccgatgacgttcttcaccaagcaggggatgctgatggaccaccgcgtcggcgccgtgttcgtgatccccccggcgatgctgcagagctccatcaccgtctccatcatcctcctcatgccgctctacgacacggtggtggtgccgctcgccggcctcgtcgccggccacggcaaggggatcacggtgctccagcggatcggcgtcgggatggtgctctccatcgtcgccatggcggtcgccgcgctcgtcgaggcgcgccgcctccgcgccgccgcgtcgtcctcgtccggcggccgcctgagcatattctggctcctcccgcagtacgtgctcctcggcgtctccgacgtgttcacggtggtgggcatgcaggagttcttctacacccaggtccccagcgccatgaggaccgtcggcatcgcgctctacctcagcgtcttcggcgtcggcagcttcgtcggcgcgttcctcatcaccgcgctcgagatggtgacggcggggggcggcggcggcgggcacgatcacgggtggttctccgatgatccccgggaggcgcggctggacaagtactactggttcttggcgctcctcagctgcgtcagcttcgtcgtcttcacacacttgtgcaagtactactagcattcatctcatcacgtagagatcagattttatttagcatttgttggaacttggaagttggggcctttgttactgtgtttgtgtgtgtgtaaattacacgcttttcatggtgagctt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0239500, RefSeq:Os06g0239500