Os06g0247000

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Revision as of 09:12, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0247000| Description = Similar to Avr9/Cf-9 rapidly elicited protein 231| Version = NM_001063818.1 GI:115467367 GeneID:4340642| Length = 17...")
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Gene Name

Os06g0247000

Description

Similar to Avr9/Cf-9 rapidly elicited protein 231

Version

NM_001063818.1 GI:115467367 GeneID:4340642

Length

1718 bp

Definition

Oryza sativa Japonica Group Os06g0247000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:7628551..7630268

Sequence Coding Region

7628553..7628647,7629567..7629873

Expression

GEO Profiles:Os06g0247000

Genome Context

<gbrowseImage1> name=NC_008399:7628551..7630268 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:7628551..7630268 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ttcgtctccccctcggagaaacgcgcaccgagctcagctgtcatccatccatccatccacgcgacgcgcagacacaaagagaaatacatacgacgcctcgtcttcgccggcgaggtcgaggccgtcgaccaccgctggaaccagcacggcctcggcggcgacaacgtgcgcggcagctgccgcccgctccacgacgggccggtcagcctcatgcactggtcaggcaaggggaagccatgggaccgcctcgacgccggcaacccgtgcccgctcgaccacacctggaagtcctacgacctctacgttgccggggacgacggcgccgccgcctcctcgccggcgtccgggccggcgttgtcgtcgacgtcgacgacgtggcccgcattggtgttctcttggtag</cdnaseq>

Protein Sequence

<aaseq>FVSPSEKRAPSSAVIHPSIHATRRHKEKYIRRLVFAGEVEAVDH RWNQHGLGGDNVRGSCRPLHDGPVSLMHWSGKGKPWDRLDAGNPCPLDHTWKSYDLYV AGDDGAAASSPASGPALSSTSTTWPALVFSW</aaseq>

Gene Sequence

<dnaseqindica>3..97#1017..1323#cgttcgtctccccctcggagaaacgcgcaccgagctcagctgtcatccatccatccatccacgcgacgcgcagacacaaagagaaatacatacgacgcctcaccgaccactcgctgcccaccattactgctgctgctgctgctgctcccaccaccaccaccaccacgggacgaggaggaggaggctgcaagaatccaagaaaccgcgatgccggcgcgggccgcggcggcggcggctgcggtggcgctgctgctggccgtctgcgctcaggcggcggcgctgccgaggttcgctgaggcgccggagtacaggaacggggaagggtgtcccgcggcggcgacggcggcggcgggggtgtgtgacgctgggctggtgcacatctcgatgacgctggacgcgcactacctgcgcgggtccatggcggcggtgtactcgctgctcaagcacgcctcctgcccggagtcgctcttcttccacttcttggcggaggaggaggaggttgggggtggtggtgacctgcggcgcgccgtggcggcgtcgttcccgtcgctgcggttcgagatctacgcgttcagggcggaggccgtggcggggctcatctcggcgtccgtgcgcgccgcgctggagtcgccgctcaactacgcgcggaaccacctcgccgacctgctcccgcgctgcgtgccccgcgcgatctacctcgactccgacgtgctcgccgtcgacgacgtgcggcgcctctgggagacgcgcctccccgccgccgccgtcgtcgcggcgcccgagtactgccacgccaacttctcccgctacttcaccccggcgttctggtccgacccaggcctcggccgccgcgtcttcgccggccgccgccgcccgccctgctacttcaacaccggcgtcatggtcatcgacctccgccgctggcgcgccggcaactaccgccaccgcatcgagcggtggatggagatccagaaggagaagcgcatctacgagctgggctcgctgccgcccttcctcctcgtcttcgccggcgaggtcgaggccgtcgaccaccgctggaaccagcacggcctcggcggcgacaacgtgcgcggcagctgccgcccgctccacgacgggccggtcagcctcatgcactggtcaggcaaggggaagccatgggaccgcctcgacgccggcaacccgtgcccgctcgaccacacctggaagtcctacgacctctacgttgccggggacgacggcgccgccgcctcctcgccggcgtccgggccggcgttgtcgtcgacgtcgacgacgtggcccgcattggtgttctcttggtagaaattgaggatctctagctgtagtgccatactgggacacaataattcttttgttggttgcgcgggttcatggcaattgcaatggtgatcctccatggcattgcattgcattgctgctgctgttgccgccgtgagctaagccacccctcgccatcggctgtacagggcggtgaagggaggccgcggcgattgccgcgcgaggatggggggagaatggatagagagaaaagatgatcttgttcttttcggcggaattcagattggttatttgggggggattttgattcttttgggtggtgattcttggggttcccaattcgctcgattggcggtgtacaattctttggtaggaaagacctggaatttttgttcaattattgattattctttcattcc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0247000, RefSeq:Os06g0247000