Os06g0250600

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Revision as of 09:12, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0250600| Description = K+ channel, pore region domain containing protein| Version = NM_001063828.2 GI:297605516 GeneID:4340653| Length = 74...")
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Gene Name

Os06g0250600

Description

K+ channel, pore region domain containing protein

Version

NM_001063828.2 GI:297605516 GeneID:4340653

Length

7487 bp

Definition

Oryza sativa Japonica Group Os06g0250600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:7798086..7805572

Sequence Coding Region

7799967..7800188,7800568..7800863,7801401..7801494

Expression

GEO Profiles:Os06g0250600

Genome Context

<gbrowseImage1> name=NC_008399:7798086..7805572 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:7798086..7805572 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>catctgttgttgctgtttgaattcagatattgtaaatcaagcttcatttttgatcttcttggttgttttccgtgggatgctatctataaggttggttatggtgacattcatgctgtgaatgtcagggagatgatattcatcatgatttatgtttcctttgatatgattcttggagcctacctcattggtaacatgactgcacttattgtcaagggctcgagaaccgagcgattcagggataagatgaaagaagttatcaggtacatgaacagaaacaagcttggaaaggacataagggaacagattaaaggacatttgaggttgcagtatgaaagcagctacactgaagcttctgtccttcaggatatcccagtctcaattcgtgcgaaggtgatcaggctgcaggaagagttcttcctacccggagaggttattttggagcagggaagtgcagttgatcaactgtactttgtctgtcatggggcactggtgagttcaagcctgaactcacaaaagcctaattctttcactattccaatgagtttgatatggaatgcatttttattcaaaatactacttaagaaaatgcagaggctccagatttgtaactag</cdnaseq>

Protein Sequence

<aaseq>HLLLLFEFRYCKSSFIFDLLGCFPWDAIYKVGYGDIHAVNVREM IFIMIYVSFDMILGAYLIGNMTALIVKGSRTERFRDKMKEVIRYMNRNKLGKDIREQI KGHLRLQYESSYTEASVLQDIPVSIRAKVIRLQEEFFLPGEVILEQGSAVDQLYFVCH GALVSSSLNSQKPNSFTIPMSLIWNAFLFKILLKKMQRLQICN</aaseq>

Gene Sequence

<dnaseqindica>5385..5606#4710..5005#4079..4172#gctcgaaccccaccaccaccaccacctccccgaccgccaccgccaccacgtgcggcgatcgccgccgcgcgccgcgacactccccccgatcgagctagtgtgcttatccgccgccggcggcgccgcctctagccgcgcgcggggatggggagggggatagggtcgaagcggagggtggaggacgacgacggggagaatatgccggggaggaagaagaaggaggaggaggaggaggaggaggatgacgatggggaagaggagtacgaggtggacgtggtgcgcgaccggatcgggtcgtcgcgggggagccgcctggcgctgttcggctccgacctccgcctcggccgcttccgcccgcgccgccgccgcgtcgcccccgtcgacggcgacgatggcatcttccaggacttcgtcatcgaccccgacaacaagtacgctccccccaccccttcctcccatatccatcccatccactcgctcgccatggattgcctccgctcgccgccgggctctagattctagaagcttcgtcacggcaagggaagggcggcaccgccgctgatcggccagcgcgctccggtcggatggttcgccgcgcctccttgctgctccattaatcaattcgaaaaaaaaccagcaccagaagaaattccctattatttattattattccttaaaagcttttccgaatatttttctttctgcctctcatcaataaatcgcttggttcacagcgttggccgcggaacgttccatttttttaaaagaaaaaaaaatgatgtagtagtagtatattcgcacgtatactgattatatggcaagattagagataaactaagtgataaaggacgtgcagtttcaacttaaagtcctctattcaatacccaacacgtacgtatataatttttttctttaagaaaatgtttgtagagacttctcttcatccaaatttcttccttaaaaatatttaaatctcgttttatatggcaagattatattagtcccagaattttttccccgttttattttctgcaaaaatttctgcgatgcttaactacacgtacagtctctgcctggaaactacacttttttgtcgatgagtttgccagatgtgcaggctttgcttgattgggcagccacatgttagcttagcgcagttcgcgggacaaactctgacgaccatacaaacgttggcgtgctcacgctttactagctgtagtagcctgtagcttcttaattagctgcataaattttttttggtcttctgggatttttcgcttgccgtgttacatatatttcaactttcaggggttagtacttactactagtactcttagtaccaacgggtttgacggtatatcgctgaactttattaagatgatagtagagtacaatagtacatctttaacataaccatggcttttctgttgcctagagatgtaactaatagtactgtggttcaacctaatgtcacgtattcaatccctaatatgcttacaatttcttcgtaaaaaagtgtttcgaggaacgtatctctctctaaatatcttttttttccttctctgttgcctttatttgatgagaaaagagtggatgaaatgaaacatgcgtcggacattattatgtggggagtaaagatgctacaagttgatgaattagcgtacatattttctttttattccgtgaaagactcataaacactttacacaagcacgggtgcatccttttaatacattacatgctctagaagacagaggccaacagtttattcgagggcaagttgatcagagaaaactctgtaattgaaaagcttttgaaaatcgattgcttttcattggaagctcaataaaatggaggaattagtagcttttgctttcgttctcatgcatgcacggatacttaaatatactctggtacttttgtccttagtcagcatccaaacattgtaaggcacattttgtcaagtaagcatgtttgcgtcatatcatggctttatattaaataactgaaatactgaagtgtgtataggaatcgtgaaagcaggtactaataacatagacacaggattttgggcaatctacatctgtatgtaatagttgttaaccggtaataataatatacaaatgagcaatctgagagcttatcacaatatgacaactaagctatagcttatacttaccgccaaccagatgtacggctacttgggaggttgtccagatcgatgtgaactccaattttgattttgtttcttcattgatttcgattgatggtttgaacgagataaaatattcgccaggatgaagagtatttttggactgttaccagcgagccgctaatcctgtggtgatgtagctggaatcatcatacttaggaataataattaagtcaatgcgtaggttgagggatctcttgacagcttatttatttatttgatgctgtgctgacagtgtcaagtagttttgattagcagtgacagggcataatcaaactgcgtcaggggacagtatccgaatttttcagtttaatttagagccattttgctacatcatgaagccattggttttgcgggattctgggtatttgattgttttgacacttttcagagtagtttaactatatcaattgcctgtcaatgatctcacttggcaattacatgataaaagatgcttttaatccctaggtcactacacatcagttgactttggttccaatttgtacttgccaagaaccggtaaaacagtaatattttgtttgaactgactagaaggatataaataatcacatgataaaagttgaaatctttatcatgtgacggaccatggggaaaaagaaaagatgaaatcttcagaacatgctttatttcgtgttccaccttttcttgctgacagggacggatcctgttcgacatgaggtagctgtcaggctgtgcaagctagcattctcagcgtcctcttaattagtttattagatttcacgctctaattagtttatttaccagtactaccagatcggtgcaccgtgcacattaggaacccactcagggccacatcatctcagacatttgcgtgtgcataatgggttatgcgtatgaactcacccgggacaacttctttggtctctgcagcgttcagcaatacttttttcggcctaacaaccaaaatttacctaataatctaaggttgtttggtgtttctagctaaagtggttttacaagaagatgccatattttagtgtatagtttggtaactctcaacatagcaaaatttatatttctagtacatctgaaggaccatgaagtttctcagctagctaaggtctaagggtatgaattttttttctttttttttttttaaaaatacgggtccgtttgataatcggccagttcataaaatacattaatgtatctatgtatgactttgcaagaaaatatacatttcgaataagttacaatttgaacgttatatttagaattagaattaatattgttctggttgctatgctggtaactgacgagatttgcatccttatttctagctagtcccagcagttaagagttcacacctttcccaggcaaccaaattgtattgctgtttgtgcatatattaagttgtggatgaccttatggttttaatatttttttggaatcactgcaggtggtatcggttatggacgaggttcatactagtgtgggcagtgtacagttccttcttcacgccattggaatttggcttcttcagggggctccccaggaacctcttcttcctagacatagctggtcagatcgccttcctcatcgacattgttctcaggttcttcgtggcctaccgtgatcctgacacctaccgcatggttcacaatcccacctccatcgctctccggtaataaaacttcctcatcacttgcttgaaattcagctagaactatgaaattcagaaccatcaaaatggatgcatcttgataatgatatgttagaactagtatcaattatttaggttgctgaaaatgtgctgttacaatagagggaacttctgtttaggcatttgcacctgaaatatgatctgcagtaactcaattgtgacatctgttgttgctgtttgaattcagatattgtaaatcaagcttcatttttgatcttcttggttgttttccgtgggatgctatctataaggttggtctttatctaacaaaattttctttggttaacatggcattatattgcggtaaacatttggcttatatttcttcgttttttatgcgttgattttgaatcaggcttgtggaagtaaagaagaagtaagatacctattgtggattcggttgacacgagctatgaaggtgacagagttcttcaggagcatggaaaaagatatccgtataaattacctgtttactaggattgtgaaactcatagttgtggaactctactgtacgcacacagcagcatgtatcttctactatcttgcaacaacacttcctgaatcaatggaaggatatacatggatagggagcttgcagttgggagactatagttattctcatttcagggagattgatcttaccaagcgttatatgacatcgctgtactttgccatagtcaccatggcaactgttggtaagttctggtgtcatttcagtccagagtcatccttgtagtctgtaaaattaacttaacttttttagatgctgaaatgttcttttcatttttgcaggttatggtgacattcatgctgtgaatgtcagggagatgatattcatcatgatttatgtttcctttgatatgattcttggagcctacctcattggtaacatgactgcacttattgtcaagggctcgagaaccgagcgattcagggataagatgaaagaagttatcaggtacatgaacagaaacaagcttggaaaggacataagggaacagattaaaggacatttgaggttgcagtatgaaagcagctacactgaagcttctgtccttcaggatatcccagtctcaattcgtgcgaaggtaaggatatgctttatttaatttttgttgttcgttcaaaaaaatattaaatttttatttcccacccttgtgtgatacagttttgaaaactgtattcgtgtaagtttactatactgatgcttctgtacacatggtatatcaactttctttttatctgttgtgattaacaatacatggcattaaatctgcagatttcacaaacactgtataagccatatatcgaaagcattccactgtttaaaggatgttcagcagaattcattcaacagattgtaagtacccctttattttggtcagactacaatacatggatatttcatacaaatttcaatctggatttttttccccatattttctctaacatgttctgatgtggcaggtgatcaggctgcaggaagagttcttcctacccggagaggttattttggagcagggaagtgcagttgatcaactgtactttgtctgtcatggggcactggtgagttcaagcctgaactcacaaaagcctaattctttcactattccaatgagtttgatatggaatgcatttttattcaaaatactacttaagaaaatgcagaggctccagatttgtaactagatatgattctatcagtaattcagtacttaccaatgatatttttcttgtgcgtaggaaggtgttggcattggtgaagatggtcaagaagagaccattctaatgctagagcctgaaagttcttttggagaaatcgctgttctctgcaatatcccacaacccttcaccgttcgtgtctgcgaactttgtcgtcttttgcggcttgacaagcaatccttcacaaacatcctggagatcttcttcgttgatggaagaagaattctgagcaacctttctgaggtacactgcagagacagccaaaatggcactcatgttgtcagattctgaaagtgaaatccatcctgcaaaacatctgcaattcatgcatgatttgatagattttttcttactggtttgcactgtgaattgtgactgcagagtagcgaatacggcagccggatcaagcagctggaatccgacatcacgttccacatcgggaagcaagaggcagagctgacgctgcgagtgaacaacgctgcgttctacggtgacatgcatcagctcaagagcctgatccgtgcaggagccgatcccaagaacaccgattacgacgggcgatctcctctggtacgaaaatctgcaatccatggaagcttttgatcttgccgatgcgtttgctcatgattcgacttaatttggatttttgtgtcttcgtcttcgtcgcagcatcttgcggcttgcaaagggttcgaagatgtcgtccagttcctcctccacgaaggcgtcgacatcgatctttccggtaatgatcgatcagttcgtcgcaatcttgcaaccaattcagttctttttcggaagcagcagcaactaattcagttctctgaacttcttttgatcagacaaatttggcaacacgccattgctggaggcggtgaagcaggggcacgaccgggtggcgacgctgctgttcagcaagggggcgaagctgagcctggagaacgccgggagccacctgtgcacggcggtggcgaggggcgacacggacttcgtccggcgggcgctcgcctacggcggcgacccgaacgcgagggactacgaccaccgcgcgccgctccacatcgccgccgccgagggcctctacctgatggcgaagctgctcgtcgacgccggcgccagcgtgttcgccaccgaccggtggggcacgacgccgctggacgaagggcgcaggtgcgggagccggacgatggtgcagctgctggaggcggccaagtccggcgagctctccaggtacccggagcgcggcgaggaggtgcgggacaagatgcacccgcggcggtgctccgtgttcccgcaccacccgtgggacggcggcgagcggcggcgggaaggggtggtggtgtggatcccgcacaccatcgaggggctcgtcagctcggcgcaggagaagctcggcctcgccggctccggcgaggggctccggctgctcggcgaggacggcgccagagtgctcgacgtcgacatggtccacgacgggcagaagctctacctcgtcgtcggcggcggcggcgatgacggcggcacggaggcaaggcagtgaagggttgcacgttttctcctcaactccgcatttgcgcgcgagttttgcggtgtaccatagcggcgggcatagccggtgtagatcgatggaagcgtgacgtgtcattactcacgggcccacaaatcagtgaccacgttactctgggttataagatccttgttgtggtgtagatacattgaggggaaaaggaaagaaaaggagggaacggatttgatgtacagattgtatattacaaggaaatgatattgtggaggaagatcttagtatatgtcacggagtaataaaggaaaagtaaattactgtttggg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0250600, RefSeq:Os06g0250600