Os06g0257600

From RiceWiki
Revision as of 09:13, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0257600| Description = Lipolytic enzyme, G-D-S-L family protein| Version = NM_001063856.1 GI:115467443 GeneID:4340682| Length = 1798 bp| D...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0257600

Description

Lipolytic enzyme, G-D-S-L family protein

Version

NM_001063856.1 GI:115467443 GeneID:4340682

Length

1798 bp

Definition

Oryza sativa Japonica Group Os06g0257600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:8235903..8237700

Sequence Coding Region

8235961..8236213,8236302..8236429,8236536..8236662,8236754..8236866,8236954..8237505

Expression

GEO Profiles:Os06g0257600

Genome Context

<gbrowseImage1> name=NC_008399:8235903..8237700 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:8235903..8237700 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagcactcgccgccgtcgccgttctcgtcgtcgccatggttatcagtggcggtggcggcgtcgccgcggcggtgacatccaagaagccagtgatctacatcttcggcgactcgatgtccgacgtcgggaacaacaactacctcatcctctcgctcgcgaagtccgattacccctggtacggcgtcgactacgagaccggattccccaccgggcggttcaccaatggcaggaccatcggggacatcatggccgccaagtttggcgtcccgccgccgccgccgttcctgtcgttgtacatgaccgacgacgaggtgctcggcggcgtcaacttcgcgtccggcggcgccggcctcctcaacgagaccggcatttacttcgttcagtacctgtcgttcgacaaccagatatcgtcgttcgaggagatcaagaacgccatgatcgccaagattggcaagaaggccgcagaggaggtagtcaatggcgccatcttccaagtcggccttgggagcaacgactacatcaacaacttcttgcggccgttcatggcggacggcatcgtgtacacccacgaagagttcatcggcctcctcatggacaccatggacaggcagctcacaaggctgtacgatctcggggcgcgcaacgtgtggttcagcgggctcgccccgctcggctgcatcccgtcgcagcgcgtcctctccgacgacggcgggtgcctggacgacgtgaacgcgtacgcggtgcagttcaacgccgccgccaggaacctcctcgagcggctcaacgcgaagctccccggcgcgagcatgtccctcgccgactgctactccgtcgtcatggagctcatcgagcacccgcagaagtacgggttcaagacgtcgcacacgtcgtgctgcgacgtggacacgacggtgggcgggctgtgcctgccgacggcgcagctctgcgacgaccgcacggcgttcgtgttctgggacgcctaccacacctccgacgctgccaaccaggtcatcgccgaccgcctctacgccgacatggtgagcgccggcgccgtacaggggaacgggaacgccaccaccgccgccgccgcctccacccccgcgcctcgcgtcgtcgtgggcggcggcgcgtcgccgtcgacccacgccgcgccgcctccaaagccttag</cdnaseq>

Protein Sequence

<aaseq>MAALAAVAVLVVAMVISGGGGVAAAVTSKKPVIYIFGDSMSDVG NNNYLILSLAKSDYPWYGVDYETGFPTGRFTNGRTIGDIMAAKFGVPPPPPFLSLYMT DDEVLGGVNFASGGAGLLNETGIYFVQYLSFDNQISSFEEIKNAMIAKIGKKAAEEVV NGAIFQVGLGSNDYINNFLRPFMADGIVYTHEEFIGLLMDTMDRQLTRLYDLGARNVW FSGLAPLGCIPSQRVLSDDGGCLDDVNAYAVQFNAAARNLLERLNAKLPGASMSLADC YSVVMELIEHPQKYGFKTSHTSCCDVDTTVGGLCLPTAQLCDDRTAFVFWDAYHTSDA ANQVIADRLYADMVSAGAVQGNGNATTAAAASTPAPRVVVGGGASPSTHAAPPPKP</aaseq>

Gene Sequence

<dnaseqindica>59..311#400..527#634..760#852..964#1052..1603#aggccaagaatcaccagcacacacactgtcacacacaaagaaagaaaaggagctagcaatggcagcactcgccgccgtcgccgttctcgtcgtcgccatggttatcagtggcggtggcggcgtcgccgcggcggtgacatccaagaagccagtgatctacatcttcggcgactcgatgtccgacgtcgggaacaacaactacctcatcctctcgctcgcgaagtccgattacccctggtacggcgtcgactacgagaccggattccccaccgggcggttcaccaatggcaggaccatcggggacatcatgggtaagcaagtgacagacagaaaaagctttggatttctctcggcacgaacggcaagatatgtgatgtttctgtgcgtgcgtgcgtgcagccgccaagtttggcgtcccgccgccgccgccgttcctgtcgttgtacatgaccgacgacgaggtgctcggcggcgtcaacttcgcgtccggcggcgccggcctcctcaacgagaccggcatttacttcgtaagccacgggcgacgtgttcctcttctttgcagcaaaagattacctcgacattgcatgattgcagttcgtgccatgaatgtgggtggccttgctgtttttgcaggttcagtacctgtcgttcgacaaccagatatcgtcgttcgaggagatcaagaacgccatgatcgccaagattggcaagaaggccgcagaggaggtagtcaatggcgccatcttccaagtcggccttggtaatagaatttcttcagctcagctctgtcacttactaaaggggattaattagtgatcaatctgacacggggcgaacttgattaattgcagggagcaacgactacatcaacaacttcttgcggccgttcatggcggacggcatcgtgtacacccacgaagagttcatcggcctcctcatggacaccatggacaggcagctcacagtaagaaatcgacacacattgatctttgttgggacgaacactttgttgttgctttggccaaatggaatttgttgtcgaatatcgcagaggctgtacgatctcggggcgcgcaacgtgtggttcagcgggctcgccccgctcggctgcatcccgtcgcagcgcgtcctctccgacgacggcgggtgcctggacgacgtgaacgcgtacgcggtgcagttcaacgccgccgccaggaacctcctcgagcggctcaacgcgaagctccccggcgcgagcatgtccctcgccgactgctactccgtcgtcatggagctcatcgagcacccgcagaagtacgggttcaagacgtcgcacacgtcgtgctgcgacgtggacacgacggtgggcgggctgtgcctgccgacggcgcagctctgcgacgaccgcacggcgttcgtgttctgggacgcctaccacacctccgacgctgccaaccaggtcatcgccgaccgcctctacgccgacatggtgagcgccggcgccgtacaggggaacgggaacgccaccaccgccgccgccgcctccacccccgcgcctcgcgtcgtcgtgggcggcggcgcgtcgccgtcgacccacgccgcgccgcctccaaagccttagacgtgcagacaacagatcgatcggccgccgttgcgccggcacaacgccgtcgccttttcgtgtgattcgagccccagtcatatctgatctccattgtcggatgagttaaacaacaagtgtttgatgaaatgatgagtagtgtcgcgattgttcaaccaacgttttccgagtcaaaatcatgcatgagatttcccg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0257600, RefSeq:Os06g0257600