Os06g0268800

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Revision as of 09:13, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0268800| Description = Protein of unknown function UPF0005 family protein| Version = NM_001063889.1 GI:115467509 GeneID:4340720| Length = 4...")
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Gene Name

Os06g0268800

Description

Protein of unknown function UPF0005 family protein

Version

NM_001063889.1 GI:115467509 GeneID:4340720

Length

4608 bp

Definition

Oryza sativa Japonica Group Os06g0268800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:8959008..8963615

Sequence Coding Region

8959797..8959841,8959940..8960086,8960166..8960302,8960527..8960796,8960915..8961052
,8963149..8963578

Expression

GEO Profiles:Os06g0268800

Genome Context

<gbrowseImage1> name=NC_008399:8959008..8963615 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:8959008..8963615 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccgcggggagcgcggggtcctcgccgccgccgccgccggggcagctggggacgctgtggtcgacgctggaggaccagcgcggcggggcgcgggaggtgcccctgctgtcgtcggcgtggggcctgccgggcggcgggaggggcggggacgggggcgggggcggggaagggggtgggtggaaggagggcttggtccggcgtgccggcgccgcggcggcgcgcgtgtggggcgccgtgcgcggcgcggcggaggagctgtgggcgttcgcgcgggccgacccgcggaaggccgtgttcgcggccaaggtcggcctggcgctggcgctcatctcgctgctggtgttcctccgtgagccccgcgacatcgtcagccactccgtctgggccatcctcaccgtcgtcgtcgtcttcgagttcagcatcggtgcaacatttagcaaaggttttaataggggattgggtacccttaccgctggagggcttgcgctagcagtcgccgaattgtccaaacacctgggaaagctggaggaagtaattcttataattagcatatttattgttgcttttttcacaaccttgacgaaactgcatccaaaaatgaaggcctatgagtatgggttccgcgtattcttgttgacattctgctatgtcatggtttctgggtacaacacagggaagttcactgatacggctgtgagtagatttatattaattgctattggtgctgctgtcagtctaggaatcaatgtaggtatttacccaatatgggctggacaagatttgcacaatttggttgcaaaaaacttcattggtgttgcaaaatccttggaaggttgcgttgatggatatttgaaatgcatggagtatgaaaggattccttcgaaaatacttgtatatcaagcatctgatgatcctctatatagtggctatagggcagcagttgaggcatcagcacaagaggaaactctgttgggttttgctatatgggagccaccccatggcgcttacaaaatgatgaagtacccctggaggaatttcaccaaagttggtggggcattgaggcattgctcctttgcagtcatggcattgcatggctgtattctttccgaaattcagaaagcagaaaggtttttagtgcagaaattcagagagttggtatag</cdnaseq>

Protein Sequence

<aaseq>MAAAGSAGSSPPPPPGQLGTLWSTLEDQRGGAREVPLLSSAWGL PGGGRGGDGGGGGEGGGWKEGLVRRAGAAAARVWGAVRGAAEELWAFARADPRKAVFA AKVGLALALISLLVFLREPRDIVSHSVWAILTVVVVFEFSIGATFSKGFNRGLGTLTA GGLALAVAELSKHLGKLEEVILIISIFIVAFFTTLTKLHPKMKAYEYGFRVFLLTFCY VMVSGYNTGKFTDTAVSRFILIAIGAAVSLGINVGIYPIWAGQDLHNLVAKNFIGVAK SLEGCVDGYLKCMEYERIPSKILVYQASDDPLYSGYRAAVEASAQEETLLGFAIWEPP HGAYKMMKYPWRNFTKVGGALRHCSFAVMALHGCILSEIQKAERFLVQKFRELV</aaseq>

Gene Sequence

<dnaseqindica>3775..3819#3530..3676#3314..3450#2820..3089#2564..2701#38..467#cgcgggaaccttctagagcgttccggatccaccggccatggcggccgcggggagcgcggggtcctcgccgccgccgccgccggggcagctggggacgctgtggtcgacgctggaggaccagcgcggcggggcgcgggaggtgcccctgctgtcgtcggcgtggggcctgccgggcggcgggaggggcggggacgggggcgggggcggggaagggggtgggtggaaggagggcttggtccggcgtgccggcgccgcggcggcgcgcgtgtggggcgccgtgcgcggcgcggcggaggagctgtgggcgttcgcgcgggccgacccgcggaaggccgtgttcgcggccaaggtcggcctggcgctggcgctcatctcgctgctggtgttcctccgtgagccccgcgacatcgtcagccactccgtctgggccatcctcaccgtcgtcgtcgtcttcgagttcagcatcggtattccttactctctggtttttttttcttcgctctcttcgtggttctaggcactaaagatcgatcgatcgatcgatggttttcgatgtactttgtgctacttctccttcttcattcctttgtagagatttcgcaaaaaagagaaaaagttgatcagatttacagatcagaagttgcatctgcaaatcaagactcacaaatcgtgtcacccaaactaatttgtctgtgtagtactagtgtgtagagcaagagcattgaggatgagatattctatttccaagggaaatgggggaacctgtcttccattttggttcatctgttgaccttctgttattattcttgtaagtagaacgtgcaaccgaacaaggagaattatagaaaacctgtgatagaataagatttgatgattaaagagttcctgcttgttcacttgcagatactaactacgattaagtattcatgtgctgggatgtttaccccgttttaaagtggttatggtccaccacgtcttagaacgtgtgcctgtggcctctctgaaacgtcctaaatttatccattagtgctggaaagtaccactaaattttgttgctagatagtatatgttgtttggacccactttgttctacaaccaactgtagaattaaatgaaataggggacacattgactaaagaagtggatgttgtttgagtaggacaaaaaatatagcattgaccacagttgctgctgaacgcctgcactggagacaacttctattttctgtaatattgttttaatgccgaaatattaaatacaattaataatgctttgctcataattctactgttggcttgcaagtttgcattttattcctttttgagtcaacaggacgctatttggaccacactctattactgcatattcataaaactttataataataacattattattcttataaaaataatgtttgcatcattttcatatatccaaaccatacattgtaagcaatagttttgcccaaaattaacttgattttactgtagcgcatgtcttttctgattagagggagtattttcgtatctacaattcacataataaacattttataattataaaatgatatattcctttgtgtgtaaaactgaaaaaaaataaagagtaaattgcacgttgggctacagtttcttaccaaggttttaatttgggccacccattatgctatgttttcactttggacttgataatatttcatttggtttcatcttgaaccacctccactattcatctctttcatctcctcctaaactatggctagctgctaggatccagaagagctgcaatgcgctcggctctgctggtgttgagtggctcaagctcaaattccggaggaaccttgcgcacactgccacgctttaagctcctcccatgctgcactgtggcctagcttgagctcaagctccacccacagctagggtggcacgagctccatccgttggcacctctgatgctcaagctccaccggcgttgcgctgcgctcgagtcaattgccgagcaccagtacgctttgcaacacgctaaggaaggagtgcctttctgagagggtgatggtttggcaagatagttgctttgagattgagctgtttcattgagtagcgtcttagcctcgattatatgactcttgaggtctgattgtgatgggttatttgcatgattttctttggattggcatgcattctttggcaagcacccaatcagaggcttgagcttgcatcatagttttttctttgtgtttgtatcataatttgtacgttcctccgtgcacacttcgtgctcacatggatgctgagctcaagccactcagggctggcagagctcgagcgcgtgcagcgtctttgggtattggctggccggagttcagggaggagcaagaagggatggaagagataaacagtgggggtagtccaatatgcaatggaagggaattatttagtccaaagcgaaaacatgaattaaggggtggtccaaactgaaactctggcgctaaaacatggctcaaagtgcaatttactcaaaaataaattgtcacccttgaataatgtggttcgtgttaatacaggtgcaacatttagcaaaggttttaataggggattgggtacccttaccgctggagggcttgcgctagcagtcgccgaattgtccaaacacctgggaaagctggaggaagtaattcttataattagcatatttattgttggtgagtattgcatctgttgcctgtggctgttgtctatcatttcctggtgctggctgtagtgttgacttgtgagtatatctaacttgtagtatgttgctttgatgtttttcattgttagcttttttcacaaccttgacgaaactgcatccaaaaatgaaggcctatgagtatgggttccgcgtattcttgttgacattctgctatgtcatggtttctgggtacaacacagggaagttcactgatacggctgtgagtagatttatattaattgctattggtgctgctgtcagtctaggaatcaatgtaggtatttacccaatatgggctggacaagatttgcacaatttggttgcaaaaaacttcattggtgttgcaaaatccttggaaggtatgaaactccaaccccgcaaaccaaccatctatagtattttttttccatgttgcgttatttgactttatgttgaaatgcgtggtaaaagaatattgtttgtggctttgtgctagcactgcaattgctatagagcatagatacatctgatgtttatgcatttcttgccaaattatgatatcaagtattgtatgcttgataccgtttttggctgttcattctaggttgcgttgatggatatttgaaatgcatggagtatgaaaggattccttcgaaaatacttgtatatcaagcatctgatgatcctctatatagtggctatagggcagcagttgaggcatcagcacaagaggaaactctggtttgatcttgctctaaatttaagagttctacttagatttcttgagtggtcaattgatcacattcttatctgtttgcagttgggttttgctatatgggagccaccccatggcgcttacaaaatgatgaagtacccctggaggaatttcaccaaagttggtggggcattgaggcattgctcctttgcagtcatggcattgcatggctgtattctttccgaaattcaggttttctcataaaatttctatagcacactttagacttctgcttttattatttttataaacaaaaatatatatcggattttgatcttaggcaccaccagaaagcagaaaggtttttagtgcagaaattcagagagttggtatagaaggtgcaaaagtgttgcgcgagcttggagacaaagtcaagacaatgaccaaattgagctcttcagatattctagcagaagtccacttggctgctgaacagttgcaaaaaaggattgatgagaagtcgtaccttcttgtgaatactgaaagatgggacactagcaagcaagccgaaggtatcaaagaagttctgaatggcactggcattatgggaaaggaaaacaagatcgaagtgaaggagcctacaattgttgaacaaactacagcgcatcattcaaaaagctttgctgttaattcatttctgagcagacatgattcatcatcaactgtagatttcaagttactgtcttggcctgctcgaagatcattccatccaaatctgccacttgaagacgaggaaacaaaaacatatgaaagtgcaagtgctctgtccttggccacatttgcctcccttctaatcgagtttgttgcccgactacagaacgttgttaatgcatttcaagagttgagtgataaggctaacttcaaagagcctgtgcaggagcctgttgcagttagtactagtgatggcggctttctccataaaatatgcaaattcgtcggaatcaagagttaacatcgcaaatgaccctactagtttcatctgaaaccttgttattcttttttttttttcaatacagttttgtttaagaattacgaaccacgaaatgtgtataaattctacacttgtgtatatgcaatgagaatattgcgagctttatttttgaatggagctccagtttgctacc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0268800, RefSeq:Os06g0268800