Os06g0272800

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Revision as of 09:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0272800| Description = Protein of unknown function DUF231, plant domain containing protein| Version = NM_001063900.1 GI:115467531 GeneID:434...")
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Gene Name

Os06g0272800

Description

Protein of unknown function DUF231, plant domain containing protein

Version

NM_001063900.1 GI:115467531 GeneID:4340732

Length

3440 bp

Definition

Oryza sativa Japonica Group Os06g0272800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:9201969..9205408

Sequence Coding Region

9201969..9203235,9203995..9204176,9204259..9204795,9204926..9205408

Expression

GEO Profiles:Os06g0272800

Genome Context

<gbrowseImage1> name=NC_008399:9201969..9205408 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:9201969..9205408 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgcctcttaataatctctgcaattttcgtgtcaagaagcagtactacaaccccaggtgcttgatccccgccgtctctctcctcctattcgtcgtcatcctcaccgtctctaatacatacttccccttcccgacaactaagtcgcgaacactgtcttactcttccttctcctcctcccccggtgggcagaaggccgccgacgaggcctgcaacatatttaggggagagtgggttccggatcctgatgcaccttactacaccaacaacacctgctcggtcatccacgagcactatgactgtatgaagtacggaaagccggaccttggcttcgtgcagtggcggtggcgtcccgacagttgtgatctcccccgtctcgacccggcgcgcttcctctcctccatgagggggaagaccttggccttcattggggattcccttgccaggaaccacatgaactccctcatctgtctactgaccagggtcgccgagccgacgacgagctggccgagcagcgagcacacggtgtaccactacggcggcggctacaacttcaccgtcctcagcttctgggcgccgttcctggtccagaacgagctcgtcgacgccgacgggccggcgcacacgggcctgtggaacctctacctcgacgagcccgacgcagtgtgggcgccgcacgtcccggcgttcgactacgccgtcgtgtcggcgtcgagctggttctaccggccgtcgatgctgtacgaggccggccggctcgtgggctgccaccactgcctcctccccaacgtcaccgacctcacgctgcggtacgcgctccgcatggccacccgcgccgcgctccgcgccgtggtgggcggcggcggcggcggcggcgtgaccgccgtgcttcggaccgtgtcgccgtcgcagtacgagggcggggagtggaacaaggacgggaactgcgtccggacgcggccgtaccggcgcggcgagaagacgctgcagggcgtcgagctcgacttccacacgctgcaggtggaggagttcgaggcggcgaagagggcggcgagcggcggtggggcgaggatgatgctgatggacacgacggaggcgatgatactgcgggcggacgcgcacccgagcaggtacaggggatggacgcgtcgcaagggatggatgaaggagtacttcaccatctccaacgactgcgtgcactggtcgatgatgaagtttcacgaggtgatcaagctgccatccattgctcattacggcctacgctatgtgcttcccgccgccgccgtcgccgcgtgcgttctggtgctcgccaccgtcagcctacccggccgcgtgccgctgccgctgctgctggcgccggaggtgatgacgaagacggcggatggcgtcggcggcgacacgtctggctgtgacatcttcaagggcgagtgggtgccggacatggccggcgagccgccgccgtacaccagcgagagctgtccggtgatccatggacactatgattgcatgcggtacggacggccggatcttgggtacgtccggtggcggtggcggccggacggcgggtgcgagctgctgcggttcgacgcggcgaggtttctcgccgcgatgaggggcaggtcggtggcgttcgtcggggactcgctggcgaggaaccagatgcactcgctggtgtgcctcctgtcgcacgccgagcggccggcgccgtggacgaacggcagctacgcgtaccgcttcgagcggcacggcctcaccgtcacggcgttctggtcgccgttcctcgtccgcgccgtcgagacggaccccgacggcccgacggggagcggctccggcctgtggagcctccacctcgacgagcccgacgccgggtgggcggcgcacgtcggcgcgttcgactacgtcgtcgtctccgccgggagctggttctaccggccgtcgatgttctacgaccgccgcggccgcctcgtcgggtgcaacacctgcctgtccccgaacgtcaccgacctcaccctccgttactccctccggatggcgttccggagcgcgctccgggcggcggcgacgggctcgcaccgccacgccacgaggaggacggtgatcgtgcggacgatctcgccgtcgcactacgagaacgggacgtggaacggggacggggactgcctccggactcggccggcgcggcgcggcgagtgggagttgaacgccatggagaaggacatgcaccggatacaggtcgaggagttcgcggcggcggcggaggagacggcggggaagagggggaaagaggcggcgaggatgctgctgatggacgcgacggaggccatggcgcagcggccggacggccacccgagcaagtacaggctgtggcagccggacaagttcaaggtgtcgcgggactgcgtgcactggtgccttcccggcgccatggacgcctgcaacgacatgctgttccacatgctcatcgggtga</cdnaseq>

Protein Sequence

<aaseq>MTPLNNLCNFRVKKQYYNPRCLIPAVSLLLFVVILTVSNTYFPF PTTKSRTLSYSSFSSSPGGQKAADEACNIFRGEWVPDPDAPYYTNNTCSVIHEHYDCM KYGKPDLGFVQWRWRPDSCDLPRLDPARFLSSMRGKTLAFIGDSLARNHMNSLICLLT RVAEPTTSWPSSEHTVYHYGGGYNFTVLSFWAPFLVQNELVDADGPAHTGLWNLYLDE PDAVWAPHVPAFDYAVVSASSWFYRPSMLYEAGRLVGCHHCLLPNVTDLTLRYALRMA TRAALRAVVGGGGGGGVTAVLRTVSPSQYEGGEWNKDGNCVRTRPYRRGEKTLQGVEL DFHTLQVEEFEAAKRAASGGGARMMLMDTTEAMILRADAHPSRYRGWTRRKGWMKEYF TISNDCVHWSMMKFHEVIKLPSIAHYGLRYVLPAAAVAACVLVLATVSLPGRVPLPLL LAPEVMTKTADGVGGDTSGCDIFKGEWVPDMAGEPPPYTSESCPVIHGHYDCMRYGRP DLGYVRWRWRPDGGCELLRFDAARFLAAMRGRSVAFVGDSLARNQMHSLVCLLSHAER PAPWTNGSYAYRFERHGLTVTAFWSPFLVRAVETDPDGPTGSGSGLWSLHLDEPDAGW AAHVGAFDYVVVSAGSWFYRPSMFYDRRGRLVGCNTCLSPNVTDLTLRYSLRMAFRSA LRAAATGSHRHATRRTVIVRTISPSHYENGTWNGDGDCLRTRPARRGEWELNAMEKDM HRIQVEEFAAAAEETAGKRGKEAARMLLMDATEAMAQRPDGHPSKYRLWQPDKFKVSR DCVHWCLPGAMDACNDMLFHMLIG</aaseq>

Gene Sequence

<dnaseqindica>2174..3440#1233..1414#614..1150#1..483#atgacgcctcttaataatctctgcaattttcgtgtcaagaagcagtactacaaccccaggtgcttgatccccgccgtctctctcctcctattcgtcgtcatcctcaccgtctctaatacatacttccccttcccgacaactaagtcgcgaacactgtcttactcttccttctcctcctcccccggtgggcagaaggccgccgacgaggcctgcaacatatttaggggagagtgggttccggatcctgatgcaccttactacaccaacaacacctgctcggtcatccacgagcactatgactgtatgaagtacggaaagccggaccttggcttcgtgcagtggcggtggcgtcccgacagttgtgatctcccccgtctcgacccggcgcgcttcctctcctccatgagggggaagaccttggccttcattggggattcccttgccaggaaccacatgaactccctcatctgtctactgaccagggtaaaaaagtgaaaaacgtgccggatttgctacagtactagcttcgatctgacccgtcgatcgcttgatcggacggtcagaaatgggccagcagcaacaagggtgtgacgttttgttggccggcctgcaggtcgccgagccgacgacgagctggccgagcagcgagcacacggtgtaccactacggcggcggctacaacttcaccgtcctcagcttctgggcgccgttcctggtccagaacgagctcgtcgacgccgacgggccggcgcacacgggcctgtggaacctctacctcgacgagcccgacgcagtgtgggcgccgcacgtcccggcgttcgactacgccgtcgtgtcggcgtcgagctggttctaccggccgtcgatgctgtacgaggccggccggctcgtgggctgccaccactgcctcctccccaacgtcaccgacctcacgctgcggtacgcgctccgcatggccacccgcgccgcgctccgcgccgtggtgggcggcggcggcggcggcggcgtgaccgccgtgcttcggaccgtgtcgccgtcgcagtacgagggcggggagtggaacaaggacgggaactgcgtccggacgcggccgtaccggcgcggcgagaagacgctgcagggcgtcgagctcgacttccacacgctgcaggttaatttcttgatttttctccattgatctagtgatcaattatcttgttctttctagggaacgtgtgttctgagcttcgtaggtggaggagttcgaggcggcgaagagggcggcgagcggcggtggggcgaggatgatgctgatggacacgacggaggcgatgatactgcgggcggacgcgcacccgagcaggtacaggggatggacgcgtcgcaagggatggatgaaggagtacttcaccatctccaacgactgcgtgcactggtgcgtccccggcgccgtcgacgcctggaacgacatgctctcacacatgttgctcacatcgcaaagctagttagttaggttattgatcaaacgaacgtagcagccgaaaaaaacagagaaaaatacattcactcctgaattcagtctagaatttcaaaaccaccgtccatgatccatgtgaatttctagcaaattgcacgagctgaactcaaacattttggtcctgtttgctgcattcgcaaagggttattgtgattccgtctgtatggacctaaatcgacctgaggcccaatattgcgaaaaatttcagaacaaacatcgtaatcgatttgagatactatattgatattttgtgacaaatctggaagaattaggaataatctagccgattcaaaagcagtggttgaactcaagttggctgatctcgacatgcagtcaaaagattatcagacagaaagggaaagctgctgctaggctagctcatacaggtggccagtgcccctggtctcaaaccaccacacctgtttagcacttcgattctttccatttcgccaagacctagtaataaacaggtggttatctcaaactacacgcgtggaatccaccatcccaagtgtacgctgaatgctaatttatcacgtaatctaatgaatattcgtgacaaaaactgcagaaaaaattcgatgtatatacagcaatctcatctcatttcatatccatgagctaagctaagctgtagtgtggacgttgaccaaccaggtcgatgatgaagtttcacgaggtgatcaagctgccatccattgctcattacggcctacgctatgtgcttcccgccgccgccgtcgccgcgtgcgttctggtgctcgccaccgtcagcctacccggccgcgtgccgctgccgctgctgctggcgccggaggtgatgacgaagacggcggatggcgtcggcggcgacacgtctggctgtgacatcttcaagggcgagtgggtgccggacatggccggcgagccgccgccgtacaccagcgagagctgtccggtgatccatggacactatgattgcatgcggtacggacggccggatcttgggtacgtccggtggcggtggcggccggacggcgggtgcgagctgctgcggttcgacgcggcgaggtttctcgccgcgatgaggggcaggtcggtggcgttcgtcggggactcgctggcgaggaaccagatgcactcgctggtgtgcctcctgtcgcacgccgagcggccggcgccgtggacgaacggcagctacgcgtaccgcttcgagcggcacggcctcaccgtcacggcgttctggtcgccgttcctcgtccgcgccgtcgagacggaccccgacggcccgacggggagcggctccggcctgtggagcctccacctcgacgagcccgacgccgggtgggcggcgcacgtcggcgcgttcgactacgtcgtcgtctccgccgggagctggttctaccggccgtcgatgttctacgaccgccgcggccgcctcgtcgggtgcaacacctgcctgtccccgaacgtcaccgacctcaccctccgttactccctccggatggcgttccggagcgcgctccgggcggcggcgacgggctcgcaccgccacgccacgaggaggacggtgatcgtgcggacgatctcgccgtcgcactacgagaacgggacgtggaacggggacggggactgcctccggactcggccggcgcggcgcggcgagtgggagttgaacgccatggagaaggacatgcaccggatacaggtcgaggagttcgcggcggcggcggaggagacggcggggaagagggggaaagaggcggcgaggatgctgctgatggacgcgacggaggccatggcgcagcggccggacggccacccgagcaagtacaggctgtggcagccggacaagttcaaggtgtcgcgggactgcgtgcactggtgccttcccggcgccatggacgcctgcaacgacatgctgttccacatgctcatcgggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0272800, RefSeq:Os06g0272800